Clone Sequence Records
BO14682.5prime Sequence
745 bp (708 high quality bases) assembled on 2006-06-02
> BO14682.5prime
GAAGTTATCAGTCGACATGTCCGAAAAGCGGAAGCTCCTTCAGCGCTACA
TGCGGAACCTGAGCGACCTACAGGATGAGCTGAAGCGAAAAGAGCTGGAG
AAGAAGATGAAGGAACTGGAAATGTTGCAGGCGAAGCTAGCTCGTCGCCA
GGAGCAATCTGGCACCAAGTGCGCTGGCGGTAAGATCAAAAACTTGCGCC
AGAAGAATCTTCGAAAGGTACTGGGAAAGTATATGATGACCTTGGAGGGA
TTTCTATGCGAGCTGGCCCGCAGGGAGGCGCGTCTAAATGGCGACAGGGG
TCGGGCTAGTGAATCCGAAAACCTGCCACATCCACAGATGTTGGAGGAGT
ACACAGTAGCGTTCTGTGCTGTTGGTGAGGATGGCCGGGAGCTGCTAGAG
GCGGCTCTTTCTGCCCGTCGATGTGCCTATGCGCCCTACAGCAAATTCAA
AGTGGGAGCAGCCTTCCGTGCGAAGTGCGGCAGGATATACGCGGGCTGCA
ACATCGAGAACGTAGCTTTCACTCCAGGCAATTGTGCGGAGCGTTGTGCC
CTGGCCAAGGGTATCAGCGAGGGCGAGAAGAAGTATACGGCGGGTGCTGT
GGTAGCCTATCACCCAGATGGGTTTACCACACCTTGCGGAGTCTGCCGGC
AGTTCATTTTGGAGTTCATCCAAAATGATATTCCTATCTACATTGCCAAG
GCTCCGCCGCCGGAGCAAGAGAACTGCATTCCTTCAATTCCGGAC
BO14682.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8349-PA | 795 | CG8349-RA | 1..729 | 17..745 | 3545 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:26:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8349-RA | 928 | CG8349-RA | 72..800 | 17..745 | 3585 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:26:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8216402..8216773 | 374..745 | 1845 | 99.7 | Plus |
2L | 23513712 | 2L | 8215986..8216349 | 17..380 | 1760 | 98.9 | Plus |
Blast to na_te.dros performed on 2015-02-09 22:26:16 has no hits.
BO14682.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:09 Download gff for
BO14682.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8349-PA | 1..729 | 17..745 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:29 Download gff for
BO14682.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8349-PA | 1..729 | 17..745 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:20:38 Download gff for
BO14682.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8349-RA | 64..800 | 8..745 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:44:35 Download gff for
BO14682.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8349-RA | 64..800 | 8..745 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:44:35 Download gff for
BO14682.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8215978..8216343 | 8..374 | 98 | -> | Plus |
2L | 8216403..8216773 | 375..745 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:20:38 Download gff for
BO14682.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8215978..8216343 | 8..374 | 98 | -> | Plus |
arm_2L | 8216403..8216773 | 375..745 | 99 | | Plus |
BO14682.3prime Sequence
686 bp (665 high quality bases) assembled on 2006-06-02
> BO14682.3prime
ATGGTCTAGAAAGCTTGCTTCAAATGAGTTAAAGCTGTGGGGAAGCAGAT
GGTAGGCGGACGTGACCAGCACTTCAGCTTCGTCCGGAATTGAAGGAATG
CAGTTCTCTTGCTCCGGCGGCGGAGCCTTGGCAATGTAGATAGGAATATC
ATTTTGGATGAACTCCAAAATGAACTGCCGGCAGACTCCGCAAGGTGTGG
TAAACCCATCTGGGTGATAGGCTACCACAGCACCCGCCGTATACTTCTTC
TCGCCCTCGCTGATACCCTTGGCCAGGGCACAACGCTCCGCACAATTGCC
TGGAGTGAAAGCTACGTTCTCGATGTTGCAGCCCGCGTATATCCTGCCGC
ACTTCGCACGGAAGGCTGCTCCCACTTTGAATTTGCTGTAGGGCGCATAG
GCACATCGACGGGCAGAAAGAGCCGCCTCTAGCAGCTCCCGGCCATCCTC
ACCAACAGCACAGAACGCTACTGTGTACTCCTCCAACATCTGTGGATGTG
GCAGGTTTTCGGATTCACTAGCCCGACCCCTGTCGCCATTTAGACGCGCC
TCCCTGCGGGCCAGCTCGCATAGAAATCCCTCCAAGGTCATCATATACTT
TCCCAGTACCTTTCGAAGATTCTTCTGGCGCAAGTTTTTTGATCTTACCG
CCAGCGCACTTGGTGCCAGATTGCTCCTGGCGACGA
BO14682.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8349-PA | 795 | CG8349-RA | 175..792 | 636..19 | 3015 | 99.5 | Minus |
CG8349-PA | 795 | CG8349-RA | 126..173 | 686..639 | 240 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:37:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8349-RA | 928 | CG8349-RA | 197..863 | 686..19 | 3255 | 99.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:36:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8216402..8216836 | 453..19 | 2160 | 99.8 | Minus |
2L | 23513712 | 2L | 8216111..8216349 | 686..447 | 1090 | 97.9 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:37:02 has no hits.
BO14682.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:08 Download gff for
BO14682.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8349-PA | 127..795 | 16..685 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:28 Download gff for
BO14682.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8349-PA | 127..795 | 16..685 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:51:31 Download gff for
BO14682.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8349-RA | 198..873 | 9..685 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:49:03 Download gff for
BO14682.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8349-RA | 198..873 | 9..685 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:49:03 Download gff for
BO14682.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8216112..8216343 | 453..685 | 98 | -> | Minus |
2L | 8216403..8216846 | 9..452 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:51:31 Download gff for
BO14682.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8216112..8216343 | 453..685 | 98 | -> | Minus |
arm_2L | 8216403..8216846 | 9..452 | 98 | | Minus |
BO14682.complete Sequence
826 bp (826 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633225
> BO14682.complete
GAAGTTATCAGTCGACATGTCCGAAAAGCGGAAGCTCCTTCAGCGCTACA
TGCGGAACCTGAGCGACCTACAGGATGAGCTGAAGCGAAAAGAGCTGGAG
AAGAAGATGAAGGAACTGGAAATGTTGCAGGCGAAGCTAGCTCGTCGCCA
GGAGCAATCTGGCACCAAGTGCGCTGGCGGTAAGATCAAAAACTTGCGCC
AGAAGAATCTTCGAAAGGTACTGGGAAAGTATATGATGACCTTGGAGGGA
TTTCTATGCGAGCTGGCCCGCAGGGAGGCGCGTCTAAATGGCGACAGGGG
TCGGGCTAGTGAATCCGAAAACCTGCCACATCCACAGATGTTGGAGGAGT
ACACAGTAGCGTTCTGTGCTGTTGGTGAGGATGGCCGGGAGCTGCTAGAG
GCGGCTCTTTCTGCCCGTCGATGTGCCTATGCGCCCTACAGCAAATTCAA
AGTGGGAGCAGCCTTCCGTGCGAAGTGCGGCAGGATATACGCGGGCTGCA
ACATCGAGAACGTAGCTTTCACTCCAGGCAATTGTGCGGAGCGTTGTGCC
CTGGCCAAGGGTATCAGCGAGGGCGAGAAGAAGTATACGGCGGGTGCTGT
GGTAGCCTATCACCCAGATGGGTTTACCACACCTTGCGGAGTCTGCCGGC
AGTTCATTTTGGAGTTCATCCAAAATGATATTCCTATCTACATTGCCAAG
GCTCCGCCGCCGGAGCAAGAGAACTGCATTCCTTCAATTCCGGACGAAGC
TGAAGTGCTGGTCACGTCCGCCTACCATCTGCTTCCCCACAGCTTTAACT
CATTTGAAGCAAGCTTTCTAGACCAT
BO14682.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:51:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8349-RA | 795 | CG8349-PA | 1..792 | 17..808 | 3900 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:51:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8349-RA | 928 | CG8349-RA | 72..863 | 17..808 | 3900 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:51:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8216402..8216836 | 374..808 | 2160 | 99.8 | Plus |
2L | 23513712 | 2L | 8215986..8216349 | 17..380 | 1760 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:51:48 has no hits.
BO14682.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:59 Download gff for
BO14682.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8349-RA | 1..795 | 17..811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:52 Download gff for
BO14682.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8349-RA | 64..873 | 8..818 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:06:22 Download gff for
BO14682.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8349-RA | 72..863 | 17..810 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:59 Download gff for
BO14682.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8349-RA | 64..873 | 8..818 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:06:12 Download gff for
BO14682.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8349-RA | 72..863 | 17..810 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:06:12 Download gff for
BO14682.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8215986..8216343 | 17..374 | 99 | -> | Plus |
2L | 8216403..8216836 | 375..810 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:06:22 Download gff for
BO14682.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8215986..8216343 | 17..374 | 99 | -> | Plus |
arm_2L | 8216403..8216836 | 375..810 | 99 | | Plus |
BO14682.pep Sequence
Translation from 16 to 826
> BO14682.pep
MSEKRKLLQRYMRNLSDLQDELKRKELEKKMKELEMLQAKLARRQEQSGT
KCAGGKIKNLRQKNLRKVLGKYMMTLEGFLCELARREARLNGDRGRASES
ENLPHPQMLEEYTVAFCAVGEDGRELLEAALSARRCAYAPYSKFKVGAAF
RAKCGRIYAGCNIENVAFTPGNCAERCALAKGISEGEKKYTAGAVVAYHP
DGFTTPCGVCRQFILEFIQNDIPIYIAKAPPPEQENCIPSIPDEAEVLVT
SAYHLLPHSFNSFEASFLDH
BO14682.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:06:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8349-PA | 264 | CG8349-PA | 1..264 | 1..264 | 1381 | 100 | Plus |
CG8353-PB | 170 | CG8353-PB | 5..168 | 100..263 | 416 | 51.5 | Plus |
CG8353-PA | 170 | CG8353-PA | 5..168 | 100..263 | 416 | 51.5 | Plus |
CG8360-PC | 158 | CG8360-PC | 26..153 | 124..261 | 317 | 50.4 | Plus |
CG8360-PA | 158 | CG8360-PA | 26..153 | 124..261 | 317 | 50.4 | Plus |