Clone BO14682 Report

Search the DGRC for BO14682

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:146
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptCG8349-RA
Protein status:BO14682.pep: validated full length
Sequenced Size:826

Clone Sequence Records

BO14682.5prime Sequence

745 bp (708 high quality bases) assembled on 2006-06-02

> BO14682.5prime
GAAGTTATCAGTCGACATGTCCGAAAAGCGGAAGCTCCTTCAGCGCTACA
TGCGGAACCTGAGCGACCTACAGGATGAGCTGAAGCGAAAAGAGCTGGAG
AAGAAGATGAAGGAACTGGAAATGTTGCAGGCGAAGCTAGCTCGTCGCCA
GGAGCAATCTGGCACCAAGTGCGCTGGCGGTAAGATCAAAAACTTGCGCC
AGAAGAATCTTCGAAAGGTACTGGGAAAGTATATGATGACCTTGGAGGGA
TTTCTATGCGAGCTGGCCCGCAGGGAGGCGCGTCTAAATGGCGACAGGGG
TCGGGCTAGTGAATCCGAAAACCTGCCACATCCACAGATGTTGGAGGAGT
ACACAGTAGCGTTCTGTGCTGTTGGTGAGGATGGCCGGGAGCTGCTAGAG
GCGGCTCTTTCTGCCCGTCGATGTGCCTATGCGCCCTACAGCAAATTCAA
AGTGGGAGCAGCCTTCCGTGCGAAGTGCGGCAGGATATACGCGGGCTGCA
ACATCGAGAACGTAGCTTTCACTCCAGGCAATTGTGCGGAGCGTTGTGCC
CTGGCCAAGGGTATCAGCGAGGGCGAGAAGAAGTATACGGCGGGTGCTGT
GGTAGCCTATCACCCAGATGGGTTTACCACACCTTGCGGAGTCTGCCGGC
AGTTCATTTTGGAGTTCATCCAAAATGATATTCCTATCTACATTGCCAAG
GCTCCGCCGCCGGAGCAAGAGAACTGCATTCCTTCAATTCCGGAC

BO14682.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG8349-PA 795 CG8349-RA 1..729 17..745 3545 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:26:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG8349-RA 928 CG8349-RA 72..800 17..745 3585 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:26:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8216402..8216773 374..745 1845 99.7 Plus
2L 23513712 2L 8215986..8216349 17..380 1760 98.9 Plus
Blast to na_te.dros performed on 2015-02-09 22:26:16 has no hits.

BO14682.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:09 Download gff for BO14682.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8349-PA 1..729 17..745 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:29 Download gff for BO14682.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8349-PA 1..729 17..745 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:20:38 Download gff for BO14682.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8349-RA 64..800 8..745 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:44:35 Download gff for BO14682.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8349-RA 64..800 8..745 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:44:35 Download gff for BO14682.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 8215978..8216343 8..374 98 -> Plus
2L 8216403..8216773 375..745 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:20:38 Download gff for BO14682.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8215978..8216343 8..374 98 -> Plus
arm_2L 8216403..8216773 375..745 99   Plus

BO14682.3prime Sequence

686 bp (665 high quality bases) assembled on 2006-06-02

> BO14682.3prime
ATGGTCTAGAAAGCTTGCTTCAAATGAGTTAAAGCTGTGGGGAAGCAGAT
GGTAGGCGGACGTGACCAGCACTTCAGCTTCGTCCGGAATTGAAGGAATG
CAGTTCTCTTGCTCCGGCGGCGGAGCCTTGGCAATGTAGATAGGAATATC
ATTTTGGATGAACTCCAAAATGAACTGCCGGCAGACTCCGCAAGGTGTGG
TAAACCCATCTGGGTGATAGGCTACCACAGCACCCGCCGTATACTTCTTC
TCGCCCTCGCTGATACCCTTGGCCAGGGCACAACGCTCCGCACAATTGCC
TGGAGTGAAAGCTACGTTCTCGATGTTGCAGCCCGCGTATATCCTGCCGC
ACTTCGCACGGAAGGCTGCTCCCACTTTGAATTTGCTGTAGGGCGCATAG
GCACATCGACGGGCAGAAAGAGCCGCCTCTAGCAGCTCCCGGCCATCCTC
ACCAACAGCACAGAACGCTACTGTGTACTCCTCCAACATCTGTGGATGTG
GCAGGTTTTCGGATTCACTAGCCCGACCCCTGTCGCCATTTAGACGCGCC
TCCCTGCGGGCCAGCTCGCATAGAAATCCCTCCAAGGTCATCATATACTT
TCCCAGTACCTTTCGAAGATTCTTCTGGCGCAAGTTTTTTGATCTTACCG
CCAGCGCACTTGGTGCCAGATTGCTCCTGGCGACGA

BO14682.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG8349-PA 795 CG8349-RA 175..792 636..19 3015 99.5 Minus
CG8349-PA 795 CG8349-RA 126..173 686..639 240 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:37:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG8349-RA 928 CG8349-RA 197..863 686..19 3255 99.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:36:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8216402..8216836 453..19 2160 99.8 Minus
2L 23513712 2L 8216111..8216349 686..447 1090 97.9 Minus
Blast to na_te.dros performed on 2015-02-12 11:37:02 has no hits.

BO14682.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:08 Download gff for BO14682.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8349-PA 127..795 16..685 98   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:28 Download gff for BO14682.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8349-PA 127..795 16..685 98   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:51:31 Download gff for BO14682.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8349-RA 198..873 9..685 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:49:03 Download gff for BO14682.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8349-RA 198..873 9..685 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:49:03 Download gff for BO14682.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 8216112..8216343 453..685 98 -> Minus
2L 8216403..8216846 9..452 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:51:31 Download gff for BO14682.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8216112..8216343 453..685 98 -> Minus
arm_2L 8216403..8216846 9..452 98   Minus

BO14682.complete Sequence

826 bp (826 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633225

> BO14682.complete
GAAGTTATCAGTCGACATGTCCGAAAAGCGGAAGCTCCTTCAGCGCTACA
TGCGGAACCTGAGCGACCTACAGGATGAGCTGAAGCGAAAAGAGCTGGAG
AAGAAGATGAAGGAACTGGAAATGTTGCAGGCGAAGCTAGCTCGTCGCCA
GGAGCAATCTGGCACCAAGTGCGCTGGCGGTAAGATCAAAAACTTGCGCC
AGAAGAATCTTCGAAAGGTACTGGGAAAGTATATGATGACCTTGGAGGGA
TTTCTATGCGAGCTGGCCCGCAGGGAGGCGCGTCTAAATGGCGACAGGGG
TCGGGCTAGTGAATCCGAAAACCTGCCACATCCACAGATGTTGGAGGAGT
ACACAGTAGCGTTCTGTGCTGTTGGTGAGGATGGCCGGGAGCTGCTAGAG
GCGGCTCTTTCTGCCCGTCGATGTGCCTATGCGCCCTACAGCAAATTCAA
AGTGGGAGCAGCCTTCCGTGCGAAGTGCGGCAGGATATACGCGGGCTGCA
ACATCGAGAACGTAGCTTTCACTCCAGGCAATTGTGCGGAGCGTTGTGCC
CTGGCCAAGGGTATCAGCGAGGGCGAGAAGAAGTATACGGCGGGTGCTGT
GGTAGCCTATCACCCAGATGGGTTTACCACACCTTGCGGAGTCTGCCGGC
AGTTCATTTTGGAGTTCATCCAAAATGATATTCCTATCTACATTGCCAAG
GCTCCGCCGCCGGAGCAAGAGAACTGCATTCCTTCAATTCCGGACGAAGC
TGAAGTGCTGGTCACGTCCGCCTACCATCTGCTTCCCCACAGCTTTAACT
CATTTGAAGCAAGCTTTCTAGACCAT

BO14682.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:51:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG8349-RA 795 CG8349-PA 1..792 17..808 3900 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:51:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG8349-RA 928 CG8349-RA 72..863 17..808 3900 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:51:47
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8216402..8216836 374..808 2160 99.8 Plus
2L 23513712 2L 8215986..8216349 17..380 1760 98.9 Plus
Blast to na_te.dros performed on 2014-11-27 07:51:48 has no hits.

BO14682.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:59 Download gff for BO14682.complete
Subject Subject Range Query Range Percent Splice Strand
CG8349-RA 1..795 17..811 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:52 Download gff for BO14682.complete
Subject Subject Range Query Range Percent Splice Strand
CG8349-RA 64..873 8..818 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:06:22 Download gff for BO14682.complete
Subject Subject Range Query Range Percent Splice Strand
CG8349-RA 72..863 17..810 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:59 Download gff for BO14682.complete
Subject Subject Range Query Range Percent Splice Strand
CG8349-RA 64..873 8..818 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:06:12 Download gff for BO14682.complete
Subject Subject Range Query Range Percent Splice Strand
CG8349-RA 72..863 17..810 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:06:12 Download gff for BO14682.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8215986..8216343 17..374 99 -> Plus
2L 8216403..8216836 375..810 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:06:22 Download gff for BO14682.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8215986..8216343 17..374 99 -> Plus
arm_2L 8216403..8216836 375..810 99   Plus

BO14682.pep Sequence

Translation from 16 to 826

> BO14682.pep
MSEKRKLLQRYMRNLSDLQDELKRKELEKKMKELEMLQAKLARRQEQSGT
KCAGGKIKNLRQKNLRKVLGKYMMTLEGFLCELARREARLNGDRGRASES
ENLPHPQMLEEYTVAFCAVGEDGRELLEAALSARRCAYAPYSKFKVGAAF
RAKCGRIYAGCNIENVAFTPGNCAERCALAKGISEGEKKYTAGAVVAYHP
DGFTTPCGVCRQFILEFIQNDIPIYIAKAPPPEQENCIPSIPDEAEVLVT
SAYHLLPHSFNSFEASFLDH

BO14682.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:06:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG8349-PA 264 CG8349-PA 1..264 1..264 1381 100 Plus
CG8353-PB 170 CG8353-PB 5..168 100..263 416 51.5 Plus
CG8353-PA 170 CG8353-PA 5..168 100..263 416 51.5 Plus
CG8360-PC 158 CG8360-PC 26..153 124..261 317 50.4 Plus
CG8360-PA 158 CG8360-PA 26..153 124..261 317 50.4 Plus