Clone BO14686 Report

Search the DGRC for BO14686

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:146
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptCG15177-RA
Protein status:BO14686.pep: validated full length
Sequenced Size:709

Clone Sequence Records

BO14686.3prime Sequence

707 bp (706 high quality bases) assembled on 2006-06-02

> BO14686.3prime
ATGGTCTAGAAAGCTTGCTTTTGCGTCCGGATTACAATAATTGAGCATGG
AGTCCATGTTGATAACATGGGCCATAAGATCCCTTTCTTCGTTCGATGGA
AATAGCCAGCCCAAGAACTCAACCAAAACGGGTTGTTGTGAAACAACCGA
GGAGTAGTCCTCAAACGAAATGACTCCATCCTTGTCTACATCAAACTTCT
TCATAATAAATTCAGTCATGTCCGCTCTGAGCTCAATTAGTTCATCTTCG
TCGTCGCCTTCGTGGAAGAATTTCTCGCATGCCACGCCCACCTGCTCGCG
ATCGATAACTCCGGTGTTCTTGGTGTCATAAACTTCAAAGGCAAACTTCA
TACGGCGCTCCAGATCCTCTGTGGTGTACAGCTCAAAGAGATCAACCCAG
GCACGGGGACTCACGTACTTGGTATCCTTGGTGATGGCCAGAAGGGAGCG
TTCAATCACCTGAACATTGGCCACGTTGAAGAGCACCAAGTAGATCTGGT
AGAACTGATTCTTCTTCATCTGTTTGGCGCCAGGTCCGTTGAACCTGACG
AACTTGTAGTAAACGCAAAGCAAACAGGTGATGTCCAAGGTGGACATCTT
CGAGGTTGCAGCGATCTCCTTAATCAATCCACCGTACAGGGCCGAGAACT
TGCTGTTCTCGGTGCTATCGACAGTGGAGTCTAGGTTTTCCATGTCGACT
GATAACT

BO14686.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG15177-PA 678 CG15177-RA 1..675 693..19 3375 100 Minus
CG15178-PA 600 CG15178-RA 181..246 513..448 180 90.9 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:42:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG15177-RA 1013 CG15177-RA 131..806 694..19 3380 100 Minus
CG15177-RB 989 CG15177-RB 131..782 694..19 3010 96.4 Minus
sowi-RA 830 CG15178-RA 148..771 693..67 740 75.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:42:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6628829..6629191 332..694 1815 100 Plus
3R 32079331 3R 6628411..6628615 19..223 1025 100 Plus
3R 32079331 3R 6628664..6628775 222..333 560 100 Plus
3R 32079331 3R 6627434..6627753 374..693 445 75.9 Plus
3R 32079331 3R 6626989..6627145 67..223 260 77.7 Plus
Blast to na_te.dros performed on 2015-02-08 12:42:48 has no hits.

BO14686.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:11 Download gff for BO14686.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15177-PA 1..678 18..693 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:34 Download gff for BO14686.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15177-PA 1..678 18..693 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:45:40 Download gff for BO14686.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 131..813 11..694 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:49:42 Download gff for BO14686.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 131..813 11..694 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:49:42 Download gff for BO14686.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 6628404..6628614 11..222 98 <- Plus
3R 6628665..6628775 223..333 100 <- Plus
3R 6628831..6629191 334..694 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:45:40 Download gff for BO14686.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2454126..2454336 11..222 98 <- Plus
arm_3R 2454387..2454497 223..333 100 <- Plus
arm_3R 2454553..2454913 334..694 100   Plus

BO14686.5prime Sequence

707 bp (707 high quality bases) assembled on 2006-06-16

> BO14686.5prime
GAAGTTATCAGTCGACATGGAAAACCTAGACTCCACTGTCGATAGCACCG
AGAACAGCAAGTTCTCGGCCCTGTACGGTGGATTGATTAAGGAGATCGCT
GCAACCTCGAAGATGTCCACCTTGGACATCACCTGTTTGCTTTGCGTTTA
CTACAAGTTCGTCAGGTTCAACGGACCTGGCGCCAAACAGATGAAGAAGA
ATCAGTTCTACCAGATCTACTTGGTGCTCTTCAACGTGGCCAATGTTCAG
GTGATTGAACGCTCCCTTCTGGCCATCACCAAGGATACCAAGTACGTGAG
TCCCCGTGCCTGGGTTGATCTCTTTGAGCTGTACACCACAGAGGATCTGG
AGCGCCGTATGAAGTTTGCCTTTGAAGTTTATGACACCAAGAACACCGGA
GTTATCGATCGCGAGCAGGTGGGCGTGGCATGCGAGAAATTCTTCCACGA
AGGCGACGACGAAGATGAACTAATTGAGCTCAGAGCGGACATGACTGAAT
TTATTATGAAGAAGTTTGATGTAGACAAGGATGGAGTCATTTCGTTTGAG
GACTACTCCTCGGTTGTTTCACAACAACCCGTTTTGGTTGAGTTCTTGGG
CTGGCTATTTCCATCGAACGAAGAAAGGGATCTTATGGCCCATGTTATCA
ACATGGACTCCATGCTCAATTATTGTAATCCGGACGCAAAAGCAAGCTTT
CTAGACC

BO14686.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG15177-PA 678 CG15177-RA 1..675 17..691 3375 100 Plus
CG15178-PA 600 CG15178-RA 181..246 197..262 180 90.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:07:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG15177-RA 1013 CG15177-RA 131..806 16..691 3380 100 Plus
CG15177-RB 989 CG15177-RB 131..782 16..691 3010 96.4 Plus
sowi-RA 830 CG15178-RA 148..771 17..643 740 75.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:07:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6628829..6629191 378..16 1815 100 Minus
3R 32079331 3R 6628411..6628615 691..487 1025 100 Minus
3R 32079331 3R 6628664..6628775 488..377 560 100 Minus
3R 32079331 3R 6627434..6627753 336..17 445 75.9 Minus
3R 32079331 3R 6626989..6627145 643..487 260 77.7 Minus
Blast to na_te.dros performed on 2015-02-12 05:07:25 has no hits.

BO14686.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:13 Download gff for BO14686.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15177-PA 1..678 17..692 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:36 Download gff for BO14686.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15177-PA 1..678 17..692 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:54:21 Download gff for BO14686.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 131..813 16..699 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:32:17 Download gff for BO14686.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 131..813 16..699 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:32:17 Download gff for BO14686.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 6628404..6628614 488..699 98 <- Minus
3R 6628665..6628775 377..487 100 <- Minus
3R 6628831..6629191 16..376 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:54:21 Download gff for BO14686.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2454126..2454336 488..699 98 <- Minus
arm_3R 2454387..2454497 377..487 100 <- Minus
arm_3R 2454553..2454913 16..376 100   Minus

BO14686.complete Sequence

709 bp (709 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633226

> BO14686.complete
GAAGTTATCAGTCGACATGGAAAACCTAGACTCCACTGTCGATAGCACCG
AGAACAGCAAGTTCTCGGCCCTGTACGGTGGATTGATTAAGGAGATCGCT
GCAACCTCGAAGATGTCCACCTTGGACATCACCTGTTTGCTTTGCGTTTA
CTACAAGTTCGTCAGGTTCAACGGACCTGGCGCCAAACAGATGAAGAAGA
ATCAGTTCTACCAGATCTACTTGGTGCTCTTCAACGTGGCCAATGTTCAG
GTGATTGAACGCTCCCTTCTGGCCATCACCAAGGATACCAAGTACGTGAG
TCCCCGTGCCTGGGTTGATCTCTTTGAGCTGTACACCACAGAGGATCTGG
AGCGCCGTATGAAGTTTGCCTTTGAAGTTTATGACACCAAGAACACCGGA
GTTATCGATCGCGAGCAGGTGGGCGTGGCATGCGAGAAATTCTTCCACGA
AGGCGACGACGAAGATGAACTAATTGAGCTCAGAGCGGACATGACTGAAT
TTATTATGAAGAAGTTTGATGTAGACAAGGATGGAGTCATTTCGTTTGAG
GACTACTCCTCGGTTGTTTCACAACAACCCGTTTTGGTTGAGTTCTTGGG
CTGGCTATTTCCATCGAACGAAGAAAGGGATCTTATGGCCCATGTTATCA
ACATGGACTCCATGCTCAATTATTGTAATCCGGACGCAAAAGCAAGCTTT
CTAGACCAT

BO14686.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:36:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG15177-RA 678 CG15177-PA 1..675 17..691 3375 100 Plus
CG15177-RB 654 CG15177-PB 1..471 17..487 2355 100 Plus
CG15177-RB 654 CG15177-PB 471..651 511..691 905 100 Plus
sowi-RA 654 CG15178-PA 1..624 17..643 715 74.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:36:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG15177-RA 1013 CG15177-RA 131..806 16..691 3380 100 Plus
CG15177-RB 989 CG15177-RB 131..602 16..487 2360 100 Plus
CG15177-RB 989 CG15177-RB 602..782 511..691 905 100 Plus
sowi-RA 830 CG15178-RA 148..771 17..643 715 74.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:35:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6628829..6629191 378..16 1815 100 Minus
3R 32079331 3R 6628411..6628615 691..487 1025 100 Minus
3R 32079331 3R 6628664..6628775 488..377 560 100 Minus
3R 32079331 3R 6627434..6627753 336..17 445 75.9 Minus
3R 32079331 3R 6626989..6627145 643..487 260 77.7 Minus
Blast to na_te.dros performed on 2014-11-28 00:36:01 has no hits.

BO14686.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:00 Download gff for BO14686.complete
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 1..678 17..692 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:53 Download gff for BO14686.complete
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 131..813 16..699 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:27:47 Download gff for BO14686.complete
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 132..802 17..687 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:00 Download gff for BO14686.complete
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 131..813 16..699 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:34:39 Download gff for BO14686.complete
Subject Subject Range Query Range Percent Splice Strand
CG15177-RA 132..802 17..687 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:34:39 Download gff for BO14686.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6628665..6628775 377..487 100 <- Minus
3R 6628831..6629190 17..376 100   Minus
3R 6628415..6628614 488..687 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:27:47 Download gff for BO14686.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2454387..2454497 377..487 100 <- Minus
arm_3R 2454553..2454912 17..376 100   Minus
arm_3R 2454137..2454336 488..687 100 <- Minus

BO14686.pep Sequence

Translation from 16 to 709

> BO14686.pep
MENLDSTVDSTENSKFSALYGGLIKEIAATSKMSTLDITCLLCVYYKFVR
FNGPGAKQMKKNQFYQIYLVLFNVANVQVIERSLLAITKDTKYVSPRAWV
DLFELYTTEDLERRMKFAFEVYDTKNTGVIDREQVGVACEKFFHEGDDED
ELIELRADMTEFIMKKFDVDKDGVISFEDYSSVVSQQPVLVEFLGWLFPS
NEERDLMAHVINMDSMLNYCNPDAKASFLDH

BO14686.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:06:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG15177-PA 225 CG15177-PA 1..225 1..225 1166 100 Plus
CG15177-PB 217 CG15177-PB 1..217 1..225 1106 96.4 Plus
sowi-PA 217 CG15178-PA 1..217 1..218 873 75.2 Plus
sunz-PA 220 CG15179-PA 1..213 1..216 507 47.2 Plus
d-cup-PA 219 CG14387-PA 3..205 4..209 421 40.8 Plus