Clone BO14687 Report

Search the DGRC for BO14687

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:146
Well:87
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO14687.pep:
Sequenced Size:412

Clone Sequence Records

BO14687.3prime Sequence

410 bp (410 high quality bases) assembled on 2006-06-16

> BO14687.3prime
ATGGTCTAGAAAGCTTGCATGACAATTACTATTGCGATGGCCTCGTTTAT
TCGTAATTGACTCGTGGGTGGCGTCGAAGAGTCTGGAGTTAATCCTCAGT
TGTTGGTCACTATTCTTTAAGGGCACCTTCTGTGTTGCCAGAATTGTGTT
CCAGTCAGCTGCGTCGGGATTCCCAGCTATCCATTTCCATGCAGATCCCA
GCCAGTTTATCGAGCAAGGTTTCCTCACGGGGGCACTGGCTATCCGGTTA
ACACACTCCGTTGCGCCTTTGAGATGAGTACTCAAAAAAGATCTCAATCC
TCCTTTCCTACAAGGAAGCGGCATCTTAAGCGATTTCGTCCATAAGTTGT
CGCATTTTTCCAAGGTCAACCACGTGAGCCAGCTTGAAGACTCCATGTCG
ACTGATAACT

BO14687.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-06 15:26:28 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 18:09:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:09:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 5096246..5096623 19..396 1875 99.7 Plus
2R 25286936 2R 2795671..2795821 275..125 440 86.1 Minus
2R 25286936 2R 2864053..2864238 98..292 380 82.1 Plus
2R 25286936 2R 3564433..3564543 258..148 375 89.2 Minus
3L 28110227 3L 24122711..24122880 275..98 300 79.2 Minus
2R 25286936 2R 2795578..2795645 391..324 205 86.8 Minus
Blast to na_te.dros performed on 2015-02-12 18:09:35 has no hits.

BO14687.3prime Sim4 Records

Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:16:46 Download gff for BO14687.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 5096246..5096631 19..407 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:16:46 Download gff for BO14687.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 5096246..5096631 19..407 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:49:02 Download gff for BO14687.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 983751..984136 19..407 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:49:02 Download gff for BO14687.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 983751..984136 19..407 98   Plus

BO14687.5prime Sequence

410 bp (410 high quality bases) assembled on 2006-06-16

> BO14687.5prime
GAAGTTATCAGTCGACATGGAGTCTTCAAGCTGGCTCACGTGGTTGACCT
TGGAAAAATGCGACAACTTATGGACGAAATCGCTTAAGATGCCGCTTCCT
TGTAGGAAAGGAGGATTGAGATCTTTTTTGAGTACTCATCTCAAAGGCGC
AACGGAGTGTGTTAACCGGATAGCCAGTGCCCCCGTGAGGAAACCTTGCT
CGATAAACTGGCTGGGATCTGCATGGAAATGGATAGCTGGGAATCCCGAC
GCAGCTGACTGGAACACAATTCTGGCAACACAGAAGGTGCCCTTAAAGAA
TAGTGACCAACAACTGAGGATTAACTCCAGACTCTTCGACGCCACCCACG
AGTCAATTACGAATAAACGAGGCCATCGCAATAGTAATTGTCATGCAAGC
TTTCTAGACC

BO14687.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-06 15:26:29 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-02 07:40:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 07:40:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 5096246..5096623 394..17 1875 99.7 Minus
2R 25286936 2R 2795671..2795821 138..288 440 86.1 Plus
2R 25286936 2R 2864053..2864238 315..121 380 82.1 Minus
2R 25286936 2R 3564433..3564543 155..265 375 89.2 Plus
3L 28110227 3L 24122711..24122880 138..315 300 79.2 Plus
2R 25286936 2R 2795578..2795645 22..89 205 86.8 Plus
Blast to na_te.dros performed on 2015-02-02 07:40:23 has no hits.

BO14687.5prime Sim4 Records

Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:14:12 Download gff for BO14687.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 5096246..5096631 6..394 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:14:12 Download gff for BO14687.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 5096246..5096631 6..394 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:44:27 Download gff for BO14687.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 983751..984136 6..394 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:44:27 Download gff for BO14687.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 983751..984136 6..394 98   Minus

BO14687.complete Sequence

412 bp (412 high quality bases) assembled on 2006-06-21

> BO14687.complete
GAAGTTATCAGTCGACATGGAGTCTTCAAGCTGGCTCACGTGGTTGACCT
TGGAAAAATGCGACAACTTATGGACGAAATCGCTTAAGATGCCGCTTCCT
TGTAGGAAAGGAGGATTGAGATCTTTTTTGAGTACTCATCTCAAAGGCGC
AACGGAGTGTGTTAACCGGATAGCCAGTGCCCCCGTGAGGAAACCTTGCT
CGATAAACTGGCTGGGATCTGCATGGAAATGGATAGCTGGGAATCCCGAC
GCAGCTGACTGGAACACAATTCTGGCAACACAGAAGGTGCCCTTAAAGAA
TAGTGACCAACAACTGAGGATTAACTCCAGACTCTTCGACGCCACCCACG
AGTCAATTACGAATAAACGAGGCCATCGCAATAGTAATTGTCATGCAAGC
TTTCTAGACCAT

BO14687.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 07:35:02 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 07:35:03 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:34:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 5096246..5096623 394..17 1875 99.7 Minus
2R 25286936 2R 2795671..2795821 138..288 440 86.1 Plus
2R 25286936 2R 2864053..2864238 315..121 380 82.1 Minus
2R 25286936 2R 3564433..3564543 155..265 375 89.2 Plus
3L 28110227 3L 24122711..24122880 138..315 300 79.2 Plus
2R 25286936 2R 2795578..2795645 22..89 205 86.8 Plus
Blast to na_te.dros performed on 2014-11-27 07:35:00 has no hits.

BO14687.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 14:18:01 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 14:18:01 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:13:24 Download gff for BO14687.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5096243..5096623 17..396 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:13:24 Download gff for BO14687.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5096243..5096623 17..396 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:18:23 Download gff for BO14687.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 983748..984128 17..396 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:18:23 Download gff for BO14687.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 983748..984128 17..396 99   Minus

BO14687.pep Sequence

Translation from 16 to 412

> BO14687.pep
MESSSWLTWLTLEKCDNLWTKSLKMPLPCRKGGLRSFLSTHLKGATECVN
RIASAPVRKPCSINWLGSAWKWIAGNPDAADWNTILATQKVPLKNSDQQL
RINSRLFDATHESITNKRGHRNSNCHASFLDH
Sequence BO14687.pep has no blast hits.