Clone Sequence Records
BO14687.3prime Sequence
410 bp (410 high quality bases) assembled on 2006-06-16
> BO14687.3prime
ATGGTCTAGAAAGCTTGCATGACAATTACTATTGCGATGGCCTCGTTTAT
TCGTAATTGACTCGTGGGTGGCGTCGAAGAGTCTGGAGTTAATCCTCAGT
TGTTGGTCACTATTCTTTAAGGGCACCTTCTGTGTTGCCAGAATTGTGTT
CCAGTCAGCTGCGTCGGGATTCCCAGCTATCCATTTCCATGCAGATCCCA
GCCAGTTTATCGAGCAAGGTTTCCTCACGGGGGCACTGGCTATCCGGTTA
ACACACTCCGTTGCGCCTTTGAGATGAGTACTCAAAAAAGATCTCAATCC
TCCTTTCCTACAAGGAAGCGGCATCTTAAGCGATTTCGTCCATAAGTTGT
CGCATTTTTCCAAGGTCAACCACGTGAGCCAGCTTGAAGACTCCATGTCG
ACTGATAACT
BO14687.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-06 15:26:28 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 18:09:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:09:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 5096246..5096623 | 19..396 | 1875 | 99.7 | Plus |
2R | 25286936 | 2R | 2795671..2795821 | 275..125 | 440 | 86.1 | Minus |
2R | 25286936 | 2R | 2864053..2864238 | 98..292 | 380 | 82.1 | Plus |
2R | 25286936 | 2R | 3564433..3564543 | 258..148 | 375 | 89.2 | Minus |
3L | 28110227 | 3L | 24122711..24122880 | 275..98 | 300 | 79.2 | Minus |
2R | 25286936 | 2R | 2795578..2795645 | 391..324 | 205 | 86.8 | Minus |
Blast to na_te.dros performed on 2015-02-12 18:09:35 has no hits.
BO14687.3prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:16:46 Download gff for
BO14687.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5096246..5096631 | 19..407 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:16:46 Download gff for
BO14687.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5096246..5096631 | 19..407 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:49:02 Download gff for
BO14687.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 983751..984136 | 19..407 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:49:02 Download gff for
BO14687.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 983751..984136 | 19..407 | 98 | | Plus |
BO14687.5prime Sequence
410 bp (410 high quality bases) assembled on 2006-06-16
> BO14687.5prime
GAAGTTATCAGTCGACATGGAGTCTTCAAGCTGGCTCACGTGGTTGACCT
TGGAAAAATGCGACAACTTATGGACGAAATCGCTTAAGATGCCGCTTCCT
TGTAGGAAAGGAGGATTGAGATCTTTTTTGAGTACTCATCTCAAAGGCGC
AACGGAGTGTGTTAACCGGATAGCCAGTGCCCCCGTGAGGAAACCTTGCT
CGATAAACTGGCTGGGATCTGCATGGAAATGGATAGCTGGGAATCCCGAC
GCAGCTGACTGGAACACAATTCTGGCAACACAGAAGGTGCCCTTAAAGAA
TAGTGACCAACAACTGAGGATTAACTCCAGACTCTTCGACGCCACCCACG
AGTCAATTACGAATAAACGAGGCCATCGCAATAGTAATTGTCATGCAAGC
TTTCTAGACC
BO14687.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-06 15:26:29 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-02 07:40:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 07:40:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 5096246..5096623 | 394..17 | 1875 | 99.7 | Minus |
2R | 25286936 | 2R | 2795671..2795821 | 138..288 | 440 | 86.1 | Plus |
2R | 25286936 | 2R | 2864053..2864238 | 315..121 | 380 | 82.1 | Minus |
2R | 25286936 | 2R | 3564433..3564543 | 155..265 | 375 | 89.2 | Plus |
3L | 28110227 | 3L | 24122711..24122880 | 138..315 | 300 | 79.2 | Plus |
2R | 25286936 | 2R | 2795578..2795645 | 22..89 | 205 | 86.8 | Plus |
Blast to na_te.dros performed on 2015-02-02 07:40:23 has no hits.
BO14687.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:14:12 Download gff for
BO14687.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5096246..5096631 | 6..394 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:14:12 Download gff for
BO14687.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5096246..5096631 | 6..394 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:44:27 Download gff for
BO14687.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 983751..984136 | 6..394 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:44:27 Download gff for
BO14687.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 983751..984136 | 6..394 | 98 | | Minus |
BO14687.complete Sequence
412 bp (412 high quality bases) assembled on 2006-06-21
> BO14687.complete
GAAGTTATCAGTCGACATGGAGTCTTCAAGCTGGCTCACGTGGTTGACCT
TGGAAAAATGCGACAACTTATGGACGAAATCGCTTAAGATGCCGCTTCCT
TGTAGGAAAGGAGGATTGAGATCTTTTTTGAGTACTCATCTCAAAGGCGC
AACGGAGTGTGTTAACCGGATAGCCAGTGCCCCCGTGAGGAAACCTTGCT
CGATAAACTGGCTGGGATCTGCATGGAAATGGATAGCTGGGAATCCCGAC
GCAGCTGACTGGAACACAATTCTGGCAACACAGAAGGTGCCCTTAAAGAA
TAGTGACCAACAACTGAGGATTAACTCCAGACTCTTCGACGCCACCCACG
AGTCAATTACGAATAAACGAGGCCATCGCAATAGTAATTGTCATGCAAGC
TTTCTAGACCAT
BO14687.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 07:35:02 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 07:35:03 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:34:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 5096246..5096623 | 394..17 | 1875 | 99.7 | Minus |
2R | 25286936 | 2R | 2795671..2795821 | 138..288 | 440 | 86.1 | Plus |
2R | 25286936 | 2R | 2864053..2864238 | 315..121 | 380 | 82.1 | Minus |
2R | 25286936 | 2R | 3564433..3564543 | 155..265 | 375 | 89.2 | Plus |
3L | 28110227 | 3L | 24122711..24122880 | 138..315 | 300 | 79.2 | Plus |
2R | 25286936 | 2R | 2795578..2795645 | 22..89 | 205 | 86.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:35:00 has no hits.
BO14687.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 14:18:01 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 14:18:01 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:13:24 Download gff for
BO14687.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5096243..5096623 | 17..396 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:13:24 Download gff for
BO14687.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5096243..5096623 | 17..396 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:18:23 Download gff for
BO14687.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 983748..984128 | 17..396 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:18:23 Download gff for
BO14687.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 983748..984128 | 17..396 | 99 | | Minus |
BO14687.pep Sequence
Translation from 16 to 412
> BO14687.pep
MESSSWLTWLTLEKCDNLWTKSLKMPLPCRKGGLRSFLSTHLKGATECVN
RIASAPVRKPCSINWLGSAWKWIAGNPDAADWNTILATQKVPLKNSDQQL
RINSRLFDATHESITNKRGHRNSNCHASFLDH
Sequence BO14687.pep has no blast hits.