Clone BO14694 Report

Search the DGRC for BO14694

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:146
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG9945-RA
Protein status:BO14694.pep: validated full length
Sequenced Size:1567

Clone Sequence Records

BO14694.5prime Sequence

792 bp (768 high quality bases) assembled on 2006-06-02

> BO14694.5prime
GAAGTTATCAGTCGACATGGGGAACCAATTGGCTATACAGATGAATAGCG
ATGAAGACGACGATTTTGATTCTTCGGACAACGAGCTGGGCTTCAACGTG
ATCAACTTTACGGTGAACGCCATGGATCTGCGCTCCGATTATTGCAGCAG
CGAGATGCCAGTTATACGAGGCAAGCCCGATCTAGTTAAATTTCAGAAAA
CTGATATGTACAAGGAGATCCAGGCGTCGAGTGGATTAGTGAGCAATCCG
AACAATCGCTGGAACCTGGTGCACGCCCTTCAGCAGCGTGAGAATGGGTT
GGCATCGCCGCACAGCGCATCGTTCTCCAAGAACCAGCAGCGCTACATAT
CCAATCTTTACATACCAAACAAAAAGGCCACACGCCTGATGTCGCTGGAA
TCCAAAATATTTGTGACCAAGTTCAATCGTTCGGGCAGCAAGTTGCTGAC
CGCTTGTCAAGATGGCTTTGTGCGCATTTACGATGGCGCCAAGGGCACTT
ATCACCTGCTGAATCGCATCCGAGCCCGCGATGTTGAGTGGAGCATCATC
GATGCGGATTTTAGTCCGAATGGCGAGCACTTCGCCTACAGCACCTGGTC
CCGCTCATTGTTCATCATGCCCGTGAATGGGGGGGAAGACGACTGCCAGT
GGATCGATGTCAATGGACTGCCAAGCCATAGGTTGGCCATCTTCTCGCTG
CGCTATTCGCCAACAGGCGACAAAATCATCGGGGGCAGCAACAATTCCAC
GGTCATCGTGACCGACATTCGCACAAGAAACACACAGATCCT

BO14694.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG9945-PB 1536 CG9945-RB 1..776 17..792 3880 100 Plus
CG9945-PA 1536 CG9945-RA 1..776 17..792 3880 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:31:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG9945-RA 1925 CG9945-RA 207..982 17..792 3880 100 Plus
CG9945-RB 1949 CG9945-RB 81..856 17..792 3880 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:31:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20618953..20619220 194..461 1340 100 Plus
2R 25286936 2R 20619476..20619663 605..792 925 99.5 Plus
2R 25286936 2R 20618709..20618888 17..196 900 100 Plus
2R 25286936 2R 20619279..20619427 460..608 745 100 Plus
Blast to na_te.dros performed on 2015-02-12 19:31:37 has no hits.

BO14694.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:20 Download gff for BO14694.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9945-PA 1..776 17..792 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:45 Download gff for BO14694.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9945-PA 1..776 17..792 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:30:00 Download gff for BO14694.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9945-RB 77..856 10..792 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:46:21 Download gff for BO14694.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9945-RB 77..856 10..792 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 23:46:21 Download gff for BO14694.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 20618705..20618888 10..196 97 -> Plus
2R 20618956..20619220 197..461 100 -> Plus
2R 20619281..20619427 462..608 100 -> Plus
2R 20619480..20619663 609..792 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:30:00 Download gff for BO14694.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16506786..16506932 462..608 100 -> Plus
arm_2R 16506985..16507168 609..792 100   Plus
arm_2R 16506210..16506393 10..196 97 -> Plus
arm_2R 16506461..16506725 197..461 100 -> Plus

BO14694.complete Sequence

1567 bp (1567 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ633229

> BO14694.complete
GAAGTTATCAGTCGACATGGGGAACCAATTGGCTATACAGATGAATAGCG
ATGAAGACGACGATTTTGATTCTTCGGACAACGAGCTGGGCTTCAACGTG
ATCAACTTTACGGTGAACGCCATGGATCTGCGCTCCGATTATTGCAGCAG
CGAGATGCCAGTTATACGAGGCAAGCCCGATCTAGTTAAATTTCAGAAAA
CTGATATGTACAAGGAGATCCAGGCGTCGAGTGGATTAGTGAGCAATCCG
AACAATCGCTGGAACCTGGTGCACGCCCTTCAGCAGCGTGAGAATGGGTT
GGCATCGCCGCACAGCGCATCGTTCTCCAAGAACCAGCAGCGCTACATAT
CCAATCTTTACATACCAAACAAAAAGGCCACACGCCTGATGTCGCTGGAA
TCCAAAATATTTGTGACCAAGTTCAATCGTTCGGGCAGCAAGTTGCTGAC
CGCTTGTCAAGATGGCTTTGTGCGCATTTACGATGGCGCCAAGGGCACTT
ATCACCTGCTGAATCGCATCCGAGCCCGCGATGTTGAGTGGAGCATCATC
GATGCGGATTTTAGTCCGAATGGCGAGCACTTCGCCTACAGCACCTGGTC
CCGCTCATTGTTCATCATGCCCGTGAATGGGGGGGAAGACGACTGCCAGT
GGATCGATGTCAATGGACTGCCAAGCCATAGGTTGGCCATCTTCTCGCTG
CGCTATTCGCCAACAGGCGACAAAATCATCGGGGGCAGCAACAATTCCAC
GGTCATCGTGACCGACATTCGCACAAGAAACACACAGATCCTGCGCACCC
ACCGCATGCCCGGCAAGGATGTTAACTCGGTGTGCTTCCTACACGATAAG
GATCCAAATGTGATAATCGCCGGCTGTGACGACGGCCTGCTAAAGGTCTA
CGACCTGCGCACCACCTTCCGTTCACGGGACCTGTCCAAGTCTGTGGCAT
CCTTCATCGGCCACTACGATGGCATCACCTACATCGATTCGCGCAACGAC
GGCTACCACGTGCTGTCCAACTCCAAAGACCAAAGCATCAAAATCTGGGA
CATAAGGCAGCCGAGCAATATGCGTAATCGCAGTCGTTCTAGACAGCAAG
TCGACCCCACCACATGGGACTACCGATGGAACCGCGTTCCGCGGGAATTT
TACAATCCGCATAAGCCACTGGAAGGAGACTCCAGCATAATGACCTACCG
CGGTCACCGAGTTACCAAAACCCTGTTGCGGGCGAAGTTCTCACCCATGG
AGCAGACAGGGCAACGCTACATTTACACAGGCTGTGCCACCGGACGTATT
ATAATTTATGATGTACTTACTGGTAAGATTCAAGAGGCTATTGAAGGACA
TAGGACTGTGATAAGAGATCTGGACTGGCATCCGGATCGCTCAGAAATCG
TGTCTGGCTCGTGGGACACCCATGTTCACCTGAACAACTTCAGCCGCAGC
AACGCCAATCGTCCGGTAAAGCGATCACATAGCTCGGATCATGACAAAAA
GCCCCTGAGAAGATCACGCCGTTTGGCGAATCGCAATGTAACACCGGACG
CAAGCTTTCTAGACCAT

BO14694.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:33:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG9945-RA 1536 CG9945-PA 1..1533 17..1549 7620 99.8 Plus
CG9945-RB 1536 CG9945-PB 1..1533 17..1549 7620 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:33:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG9945-RA 1925 CG9945-RA 207..1739 17..1549 7620 99.8 Plus
CG9945-RB 1949 CG9945-RB 81..1613 17..1549 7620 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:33:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20619476..20620019 605..1148 2705 99.8 Plus
2R 25286936 2R 20618953..20619220 194..461 1340 100 Plus
2R 25286936 2R 20618709..20618888 17..196 900 100 Plus
2R 25286936 2R 20620080..20620235 1149..1304 780 100 Plus
2R 25286936 2R 20619279..20619427 460..608 745 100 Plus
2R 25286936 2R 20620607..20620745 1411..1549 650 97.8 Plus
2R 25286936 2R 20620438..20620544 1305..1411 535 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:33:49 has no hits.

BO14694.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:54:50 Download gff for BO14694.complete
Subject Subject Range Query Range Percent Splice Strand
CG9945-RA 1..1536 17..1550 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:11:21 Download gff for BO14694.complete
Subject Subject Range Query Range Percent Splice Strand
CG9945-RA 203..1745 10..1558 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:27:03 Download gff for BO14694.complete
Subject Subject Range Query Range Percent Splice Strand
CG9945-RB 81..1613 17..1551 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:54:50 Download gff for BO14694.complete
Subject Subject Range Query Range Percent Splice Strand
CG9945-RA 203..1745 10..1558 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:34:03 Download gff for BO14694.complete
Subject Subject Range Query Range Percent Splice Strand
CG9945-RB 81..1613 17..1551 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:34:03 Download gff for BO14694.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20618956..20619220 197..461 100 -> Plus
2R 20619281..20619427 462..608 100 -> Plus
2R 20618709..20618888 17..196 100 -> Plus
2R 20619480..20620019 609..1148 100 -> Plus
2R 20620080..20620235 1149..1304 100 -> Plus
2R 20620438..20620544 1305..1411 100 -> Plus
2R 20620608..20620745 1412..1551 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:27:03 Download gff for BO14694.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16506214..16506393 17..196 100 -> Plus
arm_2R 16506461..16506725 197..461 100 -> Plus
arm_2R 16506786..16506932 462..608 100 -> Plus
arm_2R 16506985..16507524 609..1148 100 -> Plus
arm_2R 16507585..16507740 1149..1304 100 -> Plus
arm_2R 16507943..16508049 1305..1411 100 -> Plus
arm_2R 16508113..16508250 1412..1551 96   Plus

BO14694.pep Sequence

Translation from 16 to 1567

> BO14694.pep
MGNQLAIQMNSDEDDDFDSSDNELGFNVINFTVNAMDLRSDYCSSEMPVI
RGKPDLVKFQKTDMYKEIQASSGLVSNPNNRWNLVHALQQRENGLASPHS
ASFSKNQQRYISNLYIPNKKATRLMSLESKIFVTKFNRSGSKLLTACQDG
FVRIYDGAKGTYHLLNRIRARDVEWSIIDADFSPNGEHFAYSTWSRSLFI
MPVNGGEDDCQWIDVNGLPSHRLAIFSLRYSPTGDKIIGGSNNSTVIVTD
IRTRNTQILRTHRMPGKDVNSVCFLHDKDPNVIIAGCDDGLLKVYDLRTT
FRSRDLSKSVASFIGHYDGITYIDSRNDGYHVLSNSKDQSIKIWDIRQPS
NMRNRSRSRQQVDPTTWDYRWNRVPREFYNPHKPLEGDSSIMTYRGHRVT
KTLLRAKFSPMEQTGQRYIYTGCATGRIIIYDVLTGKIQEAIEGHRTVIR
DLDWHPDRSEIVSGSWDTHVHLNNFSRSNANRPVKRSHSSDHDKKPLRRS
RRLANRNVTPDASFLDH

BO14694.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG9945-PA 511 CG9945-PA 1..511 1..511 2719 100 Plus
CG9945-PB 511 CG9945-PB 1..511 1..511 2719 100 Plus
CG3436-PC 347 CG3436-PC 9..342 129..472 225 26 Plus
CG3436-PA 347 CG3436-PA 9..342 129..472 225 26 Plus
wds-PB 361 CG17437-PB 80..347 182..465 174 22.9 Plus