Clone Sequence Records
BO14704.5prime Sequence
717 bp (692 high quality bases) assembled on 2006-06-02
> BO14704.5prime
GAAGGAGGCAGTCGACATGATGACGGAAAAGATACGGAAGAGCAGCCTCA
GTGGCTATACGGTGATAGTTCTACTGGCTGCTATTCAGTTCCAAGCAAGT
GTAGTGTCCAGCACGACAACCAAACCGCCATCGACATTGGCCACATCCAC
GAAAGCTAGTCGCAATGTGAATCCCCTGACGGAGTCGAAGCTCGAGAAGA
ATTGCAAGGCGCTGTGTGAGCATTGCGGCTGTTTGGGCTTCTACTGCGGC
GAGGAGTGCCTGTGCGAGTGTAATGACGACCAATCCGATACTGAGTGCAT
TCGCACCATGCAGATGAATGCCAAGACGTTGAATCTACCATTCGAAATCG
TCATCCAGGGACCGAGCAGCAATCGGTTTGTGCGCAACGCCCAGCAGTTC
GAGCAGAAACGAGATCTGGTGGCCAGGAGCGCCAGCACTTCAATGCAGTC
GCCTCGAAATCGTCGCTCAAACATAACCATCTACAAGCCCTCCACAAAGT
TGGTCATTCAACGTACGGCCAATGGCTTAGAAACGCCATCCAAGGCTTCG
GAGCAGATAAGGCACAAGAGGTCCGTCGATCACCTGGAGTGGTTCAATGA
CTTTGCCAGTTCCTTGGTGCGTCCCTCGCCACTGGGCACTAGAACCCAGA
AGCAGCAGCGTGCATCAGCCAAGCCATCGGCATTCAAGCGTCAGGCTGAG
CTGGAGGAGCCGGCTCG
BO14704.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14834-PA | 1224 | CG14834-RA | 1..701 | 17..717 | 3380 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:31:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14834-RA | 1426 | CG14834-RA | 79..779 | 17..717 | 3430 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:31:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7346345..7347045 | 717..17 | 3430 | 99.3 | Minus |
Blast to na_te.dros performed 2015-02-09 22:31:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BS3 | 1790 | BS3 BS3 1790bp | 539..567 | 127..99 | 109 | 86.2 | Minus |
BO14704.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:28 Download gff for
BO14704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14834-PA | 1..701 | 17..717 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:54 Download gff for
BO14704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14834-PA | 1..701 | 17..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:21:14 Download gff for
BO14704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14834-RA | 70..779 | 8..717 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:45:34 Download gff for
BO14704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14834-RA | 70..779 | 8..717 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:45:34 Download gff for
BO14704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7346345..7347054 | 8..717 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:21:14 Download gff for
BO14704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7339445..7340154 | 8..717 | 98 | | Minus |
BO14704.complete Sequence
1255 bp (1255 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633230
> BO14704.complete
GAAGTTATCAGTCGACATGATGACGGAAAAGATACGGAAGAGCAGCCTCA
GTGGCTATACGGTGATACTTCTACTGGCTGCTATTCAGTTCCAAGCAAGT
GTAGTGTCCAGCACGACAACCAAACCGCCATCGACATTGGCCACATCCAC
GAAAGCTAGTCGCAATGTGAATCCCCTGACGGAGTCGAAGCTCGAGAAGA
ATTGCAAGGCGCTGTGTGAGCATTGCGGCTGTTTGGGCTTCTACTGCGGC
GAGGAGTGCCTGTGCGAGTGTAATGACGACCAATCCGATACTGAGTGCAT
TCGCACCATGCAGATGAATGCCAAGACGTTGAATCTACCATTCGAAATCG
TCATCCAGGGACCGAGCAGCAATCGGTTTGTGCGCAACGCCCAGCAGTTC
GAGCAGAAACGAGATCTGGTGGCCAGGAGCGCCAGCACTTCAATGCAGTC
GCCTCGAAATCGTCGCTCAAACATAACCATCTACAAGCCCTCCACAAAGT
TGGTCATTCAACGTACGGCCAATGGCTTAGAAACGCCATCCAAGGCTTCG
GAGCAGATAAGGCACAAGAGGTCCGTCGATCACCTGGAGTGGTTCAATGA
CTTTGCCAGTTCCTTGGTGCGTCCCTCGCCACTGGGCACTAGAGCCCAGA
AGCAGCAGCGTGCATCAGCCAAGCCATCGGCATTCAAGCGTCAGGCTGAG
CTGGAGGAGCCGGCTCGTCGGGAACCATGGTTCCTGGAGCAGTCAGCTTC
GCGACTGACTCGCCCCGCTCCACTTAAGAAGGATGCACTCTCGCGGAAGA
ACAAGAAGAGTCCTTTGTTCCGAAAGAGCGCCAAGAGCAAGGCGTCCAAG
GAGCAGTCGCGCAAGCAACCGGAGCGAGAGATTCGGCCACTCCGCGATGC
CTTGCAGGTGGTGGAGCGGATACCCAAGGTGCTTCAAGATACGGTCAGTC
ATCTGTCCTCCGATCCACGCACTGGGGATGTCTTTAGCCTGAATATTAGA
AACGAGGATGTGCCGCAGAAAAAGGATCGCCAGCCTGAGGATCGTGTGCC
ACGCAGGCCTAGCGCCACCTTCCGTGGTTTCCGGCGCAATGAGATCATCC
CCGAAGCCGTCACCCTGGCTGCCCCAATGGACCTTGCCCCACGAGCTCCA
CTTCCCGGCCAGCGTCCAGGTGGACTCCTGCTGCCCTGGCTGAGGCAGCG
GCGACTGATGCGTTTGCAGCAGGCACAGGGAAATCTGGCAAGCTTTCTAG
ACCAT
BO14704.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:11:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14834-RA | 1224 | CG14834-PA | 1..1221 | 17..1237 | 6060 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:12:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14834-RA | 1426 | CG14834-RA | 79..1299 | 17..1237 | 6060 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:11:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7345825..7347045 | 1237..17 | 6060 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:11:57 has no hits.
BO14704.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:47 Download gff for
BO14704.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14834-RA | 1..1224 | 17..1238 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:38 Download gff for
BO14704.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14834-RA | 71..1299 | 9..1237 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:19:45 Download gff for
BO14704.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14834-RA | 79..1299 | 17..1239 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:48 Download gff for
BO14704.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14834-RA | 71..1299 | 9..1237 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:27:48 Download gff for
BO14704.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14834-RA | 79..1299 | 17..1239 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:27:48 Download gff for
BO14704.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7345823..7347045 | 17..1239 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:19:45 Download gff for
BO14704.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7338923..7340145 | 17..1239 | 99 | | Minus |
BO14704.pep Sequence
Translation from 16 to 1255
> BO14704.pep
MMTEKIRKSSLSGYTVILLLAAIQFQASVVSSTTTKPPSTLATSTKASRN
VNPLTESKLEKNCKALCEHCGCLGFYCGEECLCECNDDQSDTECIRTMQM
NAKTLNLPFEIVIQGPSSNRFVRNAQQFEQKRDLVARSASTSMQSPRNRR
SNITIYKPSTKLVIQRTANGLETPSKASEQIRHKRSVDHLEWFNDFASSL
VRPSPLGTRAQKQQRASAKPSAFKRQAELEEPARREPWFLEQSASRLTRP
APLKKDALSRKNKKSPLFRKSAKSKASKEQSRKQPEREIRPLRDALQVVE
RIPKVLQDTVSHLSSDPRTGDVFSLNIRNEDVPQKKDRQPEDRVPRRPSA
TFRGFRRNEIIPEAVTLAAPMDLAPRAPLPGQRPGGLLLPWLRQRRLMRL
QQAQGNLASFLDH
BO14704.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:06:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14834-PA | 407 | CG14834-PA | 1..407 | 1..407 | 2083 | 100 | Plus |
