BO14711.complete Sequence
955 bp (955 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633231
> BO14711.complete
GAAGTTATCAGTCGACATGCTCTTTCCTTTTTCCGCCCGAAAGGCGAATA
CATCCGCTGATTTTGTTGGCTTGCGGTCCGGATTCAACTTTATAAATTGC
AGGCGAAATGCCGAGCTTTTGTCCAAGGGATATGAGCCACCGAAGGCGAT
CAAAACAGGCACCTCCATTGTGGGCATCATCTACAAGGACGGCGTTATCC
TGGGCGCCGACACTCGCGCCACCGAGGGACCCATTGTTTCCGACAAGAAT
TGCTCAAAAATTCACCACCTTCAGGATCACATATACTGTTGTGGCGCGGG
CACCGCTGCCGACACCGAAATGATTACCCTGACGACCAGCGCCGAGCTGG
ATTTGCATCGGCTGAACACCGAACGACGGGTGCCGGTAGTCTGTGCGAGC
ATGATGCTTCGCAGGACCCTCTTTCGCTACCAGGGCCACATTGGTGCCGC
CTTGGTGATGGGCGGCGTGGACACGACTGGGCCGCAGCTCTACTGCATCT
ATCCGTGCGGTTCCAACGATAAGATACCCTACGCGGCCATGGGCTCCGGC
ACCTTGGCAGCCATGTCGGTGCTGGAGCACGGCTGGAAGCCCGATCTCGA
CCTGGAGCAGGGCAAGCAGCTGGTCCGCGAGGCCATCTCGGCGGGTGTGT
TCAACGACCTGGGCTCCGGATCCAATATCGATCTATGCGTGATCACCGCA
AAGGGAGCGGTTTACCTGAGAACCGATACGATTGCCAGCGAGAAGGGCGA
GCGGTTGGGCAAATACGGCATTAAGCCCAACTCCACTATGGTCACCTCGA
TCTCCGTGCTGAGTCTGCAGGTCACCGATGAGCGAATCTATGCAGTGGAT
GATCAACAGCCGGGCACCAGTGGCGTTCAGTTGGATTCCCAGCAAGCGGA
TGAGGAACTGCCCGAAGGATCGCAAACTAAATCACCAGCAAGCTTTCTAG
ACCAT
BO14711.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:46:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta2R1-RA | 924 | CG18341-PA | 1..921 | 17..937 | 4485 | 99.1 | Plus |
| Prosbeta2-RA | 819 | CG3329-PA | 92..284 | 135..327 | 335 | 78.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:46:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta2R1-RA | 1077 | CG18341-RA | 53..973 | 17..937 | 4485 | 99.1 | Plus |
| Prosbeta2-RA | 1034 | CG3329-RA | 209..401 | 135..327 | 335 | 78.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:46:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5809403..5810054 | 286..937 | 3155 | 98.9 | Plus |
| X | 23542271 | X | 5809151..5809331 | 105..285 | 890 | 99.4 | Plus |
| X | 23542271 | X | 5809006..5809094 | 17..105 | 445 | 100 | Plus |
| 3L | 28110227 | 3L | 15000229..15000347 | 135..253 | 280 | 82.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:46:47 has no hits.
BO14711.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:49 Download gff for
BO14711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18341-RA | 1..924 | 17..938 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:40 Download gff for
BO14711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18341-RA | 1..924 | 17..938 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:31:23 Download gff for
BO14711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta2R1-RA | 53..973 | 17..939 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:50 Download gff for
BO14711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18341-RA | 1..924 | 17..938 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:37:46 Download gff for
BO14711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta2R1-RA | 53..973 | 17..939 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:37:46 Download gff for
BO14711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5809006..5809094 | 17..105 | 100 | -> | Plus |
| X | 5809152..5809331 | 106..285 | 99 | -> | Plus |
| X | 5809403..5810054 | 286..939 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:31:23 Download gff for
BO14711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5703039..5703127 | 17..105 | 100 | -> | Plus |
| arm_X | 5703185..5703364 | 106..285 | 99 | -> | Plus |
| arm_X | 5703436..5704087 | 286..939 | 98 | | Plus |
BO14711.pep Sequence
Translation from 16 to 955
> BO14711.pep
MLFPFSARKANTSADFVGLRSGFNFINCRRNAELLSKGYEPPKAIKTGTS
IVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADT
EMITLTTSAELDLHRLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMGG
VDTTGPQLYCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGK
QLVREAISAGVFNDLGSGSNIDLCVITAKGAVYLRTDTIASEKGERLGKY
GIKPNSTMVTSISVLSLQVTDERIYAVDDQQPGTSGVQLDSQQADEELPE
GSQTKSPASFLDH
BO14711.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:06:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta2R1-PA | 307 | CG18341-PA | 1..307 | 1..307 | 1588 | 100 | Plus |
| Prosbeta2-PA | 272 | CG3329-PA | 11..267 | 20..277 | 860 | 64.7 | Plus |
| Prosbeta2R2-PA | 322 | CG12161-PA | 22..266 | 21..264 | 516 | 43.3 | Plus |
| Prosbeta1-PA | 224 | CG8392-PA | 12..212 | 45..241 | 233 | 27.4 | Plus |
| Prosbeta5-PA | 282 | CG12323-PA | 73..258 | 48..232 | 224 | 32.3 | Plus |
