Clone BO14714 Report

Search the DGRC for BO14714

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:147
Well:14
Vector:pDNR-Dual
Associated Gene/Transcriptasrij-RA
Protein status:BO14714.pep: validated full length
Sequenced Size:805

Clone Sequence Records

BO14714.3prime Sequence

803 bp (761 high quality bases) assembled on 2006-06-02

> BO14714.3prime
ATGGTCTAGAAAGCTTGCATCAGTCCAGGAGTCGCCGTATTGGTTCTTCC
TTCCAGCGGGTTCACTTTGTGCCTGCTCCACGGGTCGCTGTTGAACGGCA
ACTGGTGGTTCGTAAGGTCGCGAGTATGGACTCTGCTGGTGCTTTGAGTA
CTCTTCTCGGTTCCTTCGTCGCAGGTCCTCGTAAGACTGGCCCGGCTTAG
ACGGCTCCAAGGGCAACTCCGCCTCCAGCATTGAACCAGAGTCCAGGGTG
GGGCGGTAGATGTCGTCAAGGCCGGACAAAGTAGGGCGCGATTCCGTGTC
CAGATTGAGAGAAGTGCTCCTCCCGGGCTGATACGCCTCATCGCTGTACA
CGTCCGCCGAGCTCGGCGAGAAGGGGGCCAGAGTGAAGGCCCTGCCCAGA
TTCTCGTCCGGTGTGATGGAGCTGATGACACCGCCGCCCTGTCTACGCTG
ACGCAGCAGCTCGCCCAGATGGGAGTTGGGTAGGCGCATGATCTTCTCGG
CACACTTCTGCTGGTAACTGAACTTGCCCACAAAGTAGCCCAGAATGACG
CCCATCACGACCTTGGGCACGGCGCCGTACTTGACGTGTCCCTGCAAATA
GCCGTTCTTGACGCCGAAGTAGGCCAGCAGGCCCAGTCCAGTGCCGAAAG
GCAGGCTGCGCTGGAAGAAAGACTCAGTGTTGCACTCACGTAACGCCTTC
ACCTCCTCCGCAGAAAACTGATAGTCCGCCAGGGGGTGGGGAGCGTGCGG
CGGTGGATGGTGAGAGCCATCGTTCAGCGGGGAGTCCATGTCGACTGATA
ACT

BO14714.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG13533-PA 774 asrij-RA 1..771 789..19 3780 99.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:02:05
Subject Length Description Subject Range Query Range Score Percent Strand
asrij-RA 1064 CG13533-RA 245..1016 790..19 3815 99.6 Minus
asrij-RB 904 CG13533-RB 82..856 790..19 3775 99.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:01:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22886758..22887248 730..240 2455 100 Minus
2R 25286936 2R 22887310..22887530 239..19 1060 98.6 Minus
2R 25286936 2R 22886642..22886703 790..729 310 100 Minus
Blast to na_te.dros performed on 2015-02-11 18:02:02 has no hits.

BO14714.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:39 Download gff for BO14714.3prime
Subject Subject Range Query Range Percent Splice Strand
asrij-PA 1..774 15..789 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:33:08 Download gff for BO14714.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13533-PA 1..774 15..789 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:28:23 Download gff for BO14714.3prime
Subject Subject Range Query Range Percent Splice Strand
asrij-RA 239..1020 14..800 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:38:52 Download gff for BO14714.3prime
Subject Subject Range Query Range Percent Splice Strand
asrij-RA 239..1020 14..800 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:38:52 Download gff for BO14714.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 22886636..22886702 730..800 94 -> Minus
2R 22886759..22887248 240..729 100 -> Minus
2R 22887310..22887534 14..239 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:28:23 Download gff for BO14714.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18774159..18774225 730..800 94 -> Minus
arm_2R 18774282..18774771 240..729 100 -> Minus
arm_2R 18774833..18775057 14..239 97   Minus

BO14714.5prime Sequence

758 bp (729 high quality bases) assembled on 2006-06-16

> BO14714.5prime
GAAGTTATCAGTCGACATGGACTCCCCGCTGAACGATGGCTCTCACCATC
CACCGCCGCACGCTCCCCACCCCCTGGCGGACTATCAGTTTTCTGCGGAG
GAGGTGAAGGCGTTACGTGAGTGCAACACTGAGTCTTTCTTCCAGCGCAG
CCTGCCTTTCGGCACTGGACTGGGCCTGCTGGCCTACTTCGGCGTCAAGA
ACGGCTATTTGCAGGGACACGTCAAGTACGGCGCCGTGCCCAAGGTCGTG
ATGGGCGTCATTCTGGGCTACTTTGTGGGCAAGTTCAGTTACCAGCAGAA
GTGTGCCGAGAAGATCATGCGCCTACCCAACTCCCATCTGGGCGAGCTGC
TGCGTCAGCGTAGACAGGGCGGCGGTGTCATCAGCTCCATCACACCGGAC
GAGAATCTGGGCAGGGCCTTCACTCTGGCCCCCTTCTCGCCGAGCTCGGC
GGACGTGTACAGCGATGAGGCGTATCAGCCCGGGAGGAGCACTTCTCTCA
ATCTGGACACGGAATCGCGCCCTACTTTGTCCGGCCTTGACGACATCTAC
CGCCCCACCCTGGACTCTGGTTCAATGCTGGAGGCGGAGTTGCCCTTGGA
GCCGTCTAAGCCGGGCCAGTCTTACGAGGACCTGCGACGAAGGAACCGAG
AAGAGTACTCAAAGCACCAGCAGAGTCCATACTCGCGACCTTACGAACCA
CCAGTTGCCGTTCAACAGCGACCCGTGGAGCAAGCACAAAGTGAACCCGC
TGGAAGGA

BO14714.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG13533-PA 774 asrij-RA 1..742 17..758 3610 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:27:43
Subject Length Description Subject Range Query Range Score Percent Strand
asrij-RA 1064 CG13533-RA 245..987 16..758 3655 99.5 Plus
asrij-RB 904 CG13533-RB 82..827 16..758 3615 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:27:38
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22886758..22887248 76..566 2455 100 Plus
2R 25286936 2R 22887310..22887501 567..758 900 97.9 Plus
2R 25286936 2R 22886642..22886703 16..77 310 100 Plus
Blast to na_te.dros performed on 2015-02-11 10:27:41 has no hits.

BO14714.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:39 Download gff for BO14714.5prime
Subject Subject Range Query Range Percent Splice Strand
asrij-PA 1..741 17..757 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:33:09 Download gff for BO14714.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13533-PA 1..741 17..757 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:09:05 Download gff for BO14714.5prime
Subject Subject Range Query Range Percent Splice Strand
asrij-RA 239..986 6..757 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:21:08 Download gff for BO14714.5prime
Subject Subject Range Query Range Percent Splice Strand
asrij-RA 239..986 6..757 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:21:08 Download gff for BO14714.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 22886636..22886702 6..76 94 -> Plus
2R 22886759..22887248 77..566 100 -> Plus
2R 22887310..22887500 567..757 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:09:05 Download gff for BO14714.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18774833..18775023 567..757 97   Plus
arm_2R 18774159..18774225 6..76 94 -> Plus
arm_2R 18774282..18774771 77..566 100 -> Plus

BO14714.complete Sequence

805 bp (805 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633232

> BO14714.complete
GAAGTTATCAGTCGACATGGACTCCCCGCTGAACGATGGCTCTCACCATC
CACCGCCGCACGCTCCCCACCCCCTGGCGGACTATCAGTTTTCTGCGGAG
GAGGTGAAGGCGTTACGTGAGTGCAACACTGAGTCTTTCTTCCAGCGCAG
CCTGCCTTTCGGCACTGGACTGGGCCTGCTGGCCTACTTCGGCGTCAAGA
ACGGCTATTTGCAGGGACACGTCAAGTACGGCGCCGTGCCCAAGGTCGTG
ATGGGCGTCATTCTGGGCTACTTTGTGGGCAAGTTCAGTTACCAGCAGAA
GTGTGCCGAGAAGATCATGCGCCTACCCAACTCCCATCTGGGCGAGCTGC
TGCGTCAGCGTAGACAGGGCGGCGGTGTCATCAGCTCCATCACACCGGAC
GAGAATCTGGGCAGGGCCTTCACTCTGGCCCCCTTCTCGCCGAGCTCGGC
GGACGTGTACAGCGATGAGGCGTATCAGCCCGGGAGGAGCACTTCTCTCA
ATCTGGACACGGAATCGCGCCCTACTTTGTCCGGCCTTGACGACATCTAC
CGCCCCACCCTGGACTCTGGTTCAATGCTGGAGGCGGAGTTGCCCTTGGA
GCCGTCTAAGCCGGGCCAGTCTTACGAGGACCTGCGACGAAGGAACCGAG
AAGAGTACTCAAAGCACCAGCAGAGTCCATACTCGCGACCTTACGAACCA
CCAGTTGCCGTTCAACAGCGACCCGTGGAGCAGGCACAAAGTGAACCCGC
TGGAAGGAAGAACCAATACGGCGACTCCTGGACTGATGCAAGCTTTCTAG
ACCAT

BO14714.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:19:00
Subject Length Description Subject Range Query Range Score Percent Strand
asrij-RA 774 CG13533-PA 1..771 17..787 3810 99.6 Plus
asrij-RB 777 CG13533-PB 1..774 17..787 3745 99.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:19:01
Subject Length Description Subject Range Query Range Score Percent Strand
asrij-RA 1064 CG13533-RA 245..1016 16..787 3815 99.6 Plus
asrij-RB 904 CG13533-RB 82..856 16..787 3750 99.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:18:57
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22886758..22887248 76..566 2455 100 Plus
2R 25286936 2R 22887310..22887530 567..787 1060 98.6 Plus
2R 25286936 2R 22886642..22886703 16..77 310 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:18:58 has no hits.

BO14714.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:50 Download gff for BO14714.complete
Subject Subject Range Query Range Percent Splice Strand
asrij-RA 1..774 17..791 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:42 Download gff for BO14714.complete
Subject Subject Range Query Range Percent Splice Strand
asrij-RA 239..1020 6..792 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:06:21 Download gff for BO14714.complete
Subject Subject Range Query Range Percent Splice Strand
asrij-RA 246..1016 17..789 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:51 Download gff for BO14714.complete
Subject Subject Range Query Range Percent Splice Strand
asrij-RA 239..1020 6..792 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:19:12 Download gff for BO14714.complete
Subject Subject Range Query Range Percent Splice Strand
asrij-RA 246..1016 17..789 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:19:12 Download gff for BO14714.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22886643..22886702 17..76 100 -> Plus
2R 22886759..22887248 77..566 100 -> Plus
2R 22887310..22887530 567..789 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:06:21 Download gff for BO14714.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18774166..18774225 17..76 100 -> Plus
arm_2R 18774282..18774771 77..566 100 -> Plus
arm_2R 18774833..18775053 567..789 97   Plus

BO14714.pep Sequence

Translation from 16 to 805

> BO14714.pep
MDSPLNDGSHHPPPHAPHPLADYQFSAEEVKALRECNTESFFQRSLPFGT
GLGLLAYFGVKNGYLQGHVKYGAVPKVVMGVILGYFVGKFSYQQKCAEKI
MRLPNSHLGELLRQRRQGGGVISSITPDENLGRAFTLAPFSPSSADVYSD
EAYQPGRSTSLNLDTESRPTLSGLDDIYRPTLDSGSMLEAELPLEPSKPG
QSYEDLRRRNREEYSKHQQSPYSRPYEPPVAVQQRPVEQAQSEPAGRKNQ
YGDSWTDASFLDH

BO14714.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:06:34
Subject Length Description Subject Range Query Range Score Percent Strand
asrij-PA 257 CG13533-PA 1..257 1..257 1365 100 Plus
asrij-PB 258 CG13533-PB 1..258 1..257 1353 99.6 Plus