Clone Sequence Records
BO14726.5prime Sequence
763 bp (707 high quality bases) assembled on 2006-06-02
> BO14726.5prime
GAAGTTATCAGTCGACATGATTAGTGGCTCTGGGAGTCGGACGCCCTCAA
ATCGACTTTATTTGTCGCCCGTTCGCCCCACGATGCAGAACAAACGGAGG
CTTCTGCGGGAGTACAGGTCCTACGATGACCTCAGCGAGCACTACCGCAT
GTTTGGATCGCAGTCCCTGGACTCGCTGCAGGATCGCGTGGACATGAATC
CCAGTGGCTGCGATGGCTTATCCACGGACGGACTCGACTTCTGCTCGCAG
TCCCACTCGGGGCTGCTGAGGGAGCACAATTTCAAGATTAAGTCCTACTA
CTACAACGTGGGGAACTGCGTACACTGCCGCAAAAGGATCCGCTTCGCCA
TGGCCAGCCTGAGGTGTCGGGCGTGTCCGCTCCGCTGCCACATCGGTTGC
TGCCGCCAGCTGACGGTGAACTGCATCCCCCAGCCTCAAATCGGTACGAA
GAGAGGATGTCTCAGCGATTATGCGCCTCGGGTGGCGCCCATGGTGCCGG
CCTTAATTGTCCATTGTGTAACGGAGATCGAGGCGCGGGGATTGCAGCAG
GAGGGACTCTACCGGGTGTCCTCCACCCGAGAGAAATGCAAACGACTGCG
TCGGAAGCTGCTGCGTGGCAAGTCCACGCCGCATTTGGGCAATAAAGACA
CCCACACACTGTGCTGTTGTGTTAAGGACTTTCTTCCGGAGTTGGGTTCA
CCCTCTGATTCCCATTTACCACCGAAGGGATTTCGAGGAGGCCACGCGGC
ACGAAGATCGTCT
BO14726.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2595-PA | 1155 | RacGAP84C-RA | 1..670 | 17..686 | 3350 | 100 | Plus |
CG2595-PB | 1152 | RacGAP84C-RB | 1..670 | 17..686 | 3350 | 100 | Plus |
CG2595-PA | 1155 | RacGAP84C-RA | 678..746 | 695..763 | 345 | 100 | Plus |
CG2595-PB | 1152 | RacGAP84C-RB | 678..746 | 695..763 | 345 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 01:45:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RacGAP84C-RB | 1354 | CG2595-RB | 144..889 | 17..763 | 3680 | 99.6 | Plus |
RacGAP84C-RA | 1412 | CG2595-RA | 144..889 | 17..763 | 3680 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 01:45:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7286559..7286986 | 335..763 | 2065 | 99.3 | Plus |
3R | 32079331 | 3R | 7286105..7286425 | 17..337 | 1605 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-04 01:45:45 has no hits.
BO14726.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:51 Download gff for
BO14726.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2595-PB | 1..746 | 17..763 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:33:25 Download gff for
BO14726.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2595-PB | 1..746 | 17..763 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:39:18 Download gff for
BO14726.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RacGAP84C-RA | 144..889 | 17..763 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:16:54 Download gff for
BO14726.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RacGAP84C-RA | 144..889 | 17..763 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:16:54 Download gff for
BO14726.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7286105..7286424 | 17..336 | 100 | -> | Plus |
3R | 7286561..7286986 | 337..763 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:39:18 Download gff for
BO14726.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3111827..3112146 | 17..336 | 100 | -> | Plus |
arm_3R | 3112283..3112708 | 337..763 | 99 | | Plus |
BO14726.complete Sequence
1186 bp (1186 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ638732
> BO14726.complete
GAAGTTATCAGTCGACATGATTAGTGGCTCTGGGAGTCGGACGCCCTCAA
ATCGACTTTATTTGTCGCCCGTTCGCCCCACGATGCAGAACAAACGGAGG
CTTCTGCGGGAGTACAGGTCCTACGATGACCTCAGCGAGCACTACCGCAT
GTTTGGATCGCAGTCCCTGGACTCGCTGCAGGATCGCGTGGACATGAATC
CCAGTGGCTGCGATGGCTTATCCACGGACGGACTCGACTTCTGCTCGCAG
TCCCACTCGGGGCTGCTGAGGGAGCACAATTTCAAGATTAAGTCCTACTA
CTACAACGTGGGGAACTGCGTACACTGCCGCAAAAGGATCCGCTTCGCCA
TGGCCAGCCTGAGGTGTCGGGCGTGTCCGCTCCGCTGCCACATCGGTTGC
TGCCGCCAGCTGACGGTGAACTGCATCCCCCAGCCTCAAATCGGTACGAA
GAGAGGATGTCTCAGCGATTATGCGCCTCGGGTGGCGCCCATGGTGCCGG
CCTTAATTGTCCATTGTGTAACGGAGATCGAGGCGCGGGGATTGCAGCAG
GAGGGACTCTACCGGGTGTCCTCCACCCGAGAGAAATGCAAACGACTGCG
TCGGAAGCTGCTGCGTGGCAAGTCCACGCCGCATTTGGGCAATAAAGACA
CCCACACACTGTGCTGTTGTGTTAAGGACTTTCTTCGGCAGTTGGTTCAC
CCTCTGATTCCCATTTACCACCGAAGGGATTTCGAGGAGGCCACGCGGCA
CGAAGATCGTCTGGCTGTGGAGATGGCGGTATATTTAGCGGTTCTGGAGC
TGCATCAGGCTCACAGGGATACGTTGGCCTACTTAATGCTTCACTGGCAG
AAAATTGCCGAAAGTCCTGCTGTCCGCATGACGGTCAACAATCTTGCCGT
GATCTTCGCTCCAACTCTGTTCGGAGATCTGGATCTAACCCTCGAAAATG
TCGTCACTTGGCAGCGGGTGCTGAAGGTGCTACTTCTGATGCCTGCCGGA
TTTTGGTCTCAGTTCTTGGAGGTCCATCCCCTTCCCACTTCGTTGGGCAG
CACCTATGACTTTGAGGACCGGTACAATCACCGTCACTGGGACAGCTCGT
CCAATCTGGGATGGTCTTCTGTTAAGACCTACTTTAGATCAATGGTCAAC
CTTAGCAGTACTCACCTAGCAAGCTTTCTAGACCAT
BO14726.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:16:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RacGAP84C-RA | 1155 | CG2595-PA | 1..1152 | 17..1168 | 5760 | 100 | Plus |
RacGAP84C-RB | 1152 | CG2595-PB | 1..1130 | 17..1146 | 5650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:16:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RacGAP84C-RA | 1412 | CG2595-RA | 144..1295 | 17..1168 | 5760 | 100 | Plus |
RacGAP84C-RB | 1354 | CG2595-RB | 144..1273 | 17..1146 | 5650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:16:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7286559..7287370 | 335..1146 | 4060 | 100 | Plus |
3R | 32079331 | 3R | 7286105..7286425 | 17..337 | 1605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:16:21 has no hits.
BO14726.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:52 Download gff for
BO14726.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RacGAP84C-RA | 1..1155 | 17..1169 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:44 Download gff for
BO14726.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RacGAP84C-RA | 743..1894 | 17..1168 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:38:27 Download gff for
BO14726.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RacGAP84C-RA | 144..1295 | 17..1170 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:52 Download gff for
BO14726.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RacGAP84C-RA | 743..1894 | 17..1168 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:07:20 Download gff for
BO14726.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RacGAP84C-RA | 144..1295 | 17..1170 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:07:20 Download gff for
BO14726.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7286105..7286424 | 17..336 | 100 | -> | Plus |
3R | 7286561..7287368 | 337..1144 | 100 | -> | Plus |
3R | 7287489..7287512 | 1145..1170 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:38:27 Download gff for
BO14726.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3111827..3112146 | 17..336 | 100 | -> | Plus |
arm_3R | 3112283..3113090 | 337..1144 | 100 | -> | Plus |
arm_3R | 3113211..3113234 | 1145..1170 | 92 | | Plus |
BO14726.pep Sequence
Translation from 16 to 1186
> BO14726.pep
MISGSGSRTPSNRLYLSPVRPTMQNKRRLLREYRSYDDLSEHYRMFGSQS
LDSLQDRVDMNPSGCDGLSTDGLDFCSQSHSGLLREHNFKIKSYYYNVGN
CVHCRKRIRFAMASLRCRACPLRCHIGCCRQLTVNCIPQPQIGTKRGCLS
DYAPRVAPMVPALIVHCVTEIEARGLQQEGLYRVSSTREKCKRLRRKLLR
GKSTPHLGNKDTHTLCCCVKDFLRQLVHPLIPIYHRRDFEEATRHEDRLA
VEMAVYLAVLELHQAHRDTLAYLMLHWQKIAESPAVRMTVNNLAVIFAPT
LFGDLDLTLENVVTWQRVLKVLLLMPAGFWSQFLEVHPLPTSLGSTYDFE
DRYNHRHWDSSSNLGWSSVKTYFRSMVNLSSTHLASFLDH
BO14726.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:06:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RacGAP84C-PA | 384 | CG2595-PA | 1..384 | 1..384 | 2062 | 100 | Plus |
RacGAP84C-PB | 383 | CG2595-PB | 1..377 | 1..377 | 2027 | 100 | Plus |
tum-PA | 625 | CG13345-PA | 312..581 | 80..341 | 679 | 48.3 | Plus |
RhoGAP5A-PA | 494 | CG3208-PA | 240..463 | 85..301 | 213 | 29.1 | Plus |
RhoGAP18B-PH | 468 | CG42274-PH | 289..440 | 158..310 | 156 | 31 | Plus |