Clone BO14730 Report

Search the DGRC for BO14730

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:147
Well:30
Vector:pDNR-Dual
Associated Gene/TranscriptCG9573-RA
Protein status:BO14730.pep: validated full length
Sequenced Size:904

Clone Sequence Records

BO14730.3prime Sequence

728 bp (648 high quality bases) assembled on 2006-06-16

> BO14730.3prime
ATGGTCTAGAAAGCTTGCGGAGGAGCCCATTGGGTTGACGGCGTTTGTCT
GCAGGTTCTTGAGCAGCATCTGCAGCCACTGCTTGGTGCACGTGTCATGT
TGGACGAGCGACGTGAAGGTGCCGTCACGCAGCAGATCGGGCAGACACAC
TCTAAGTGCACTGCGAGCGCGCGCATTTTCCGTAAGTAGTAGATAGCAGC
GCACCACATGCTTCAGCACCCGGAGGCATGGAAACTTCAACATATGGATG
ACCATTTTGCCCAGGGTGATGGCCACCTGCGAGAAGCGATCGTGGTTCTC
GCAAATGTACGTCAGACCCATCTCATCGAGCAGTATCTTCTCAAGGATTG
AAGTGGCCGCGATCTTGGTCAGCTTCGATCCCCTGACCATATTGGTCAGA
CAGTGAGGCACGACCTCGCTCCATATCAGGAAGATGAGGACCTCCGTATC
ACCGGTCTCGGCCAGAGCATTAATCACGCCCAGCGTGGTCAGGCGCAGCT
GCTCGAAGGGCCTGCTCTTGAACGTGGTCGACAAGAAGGGGTACAAGTAC
ATCGGTATCTGGTCCCGCAGGAAGGCCGGGCGAGTCTCCGGATGCGAGGC
GACGCACTGTAGCAAAGTCAGGGCGTAGCACACGCGGTTCGACTGGTTGG
CCTTCAAAACGGGCGTCGTTATTATGGGGTATATGTTGACGATCTCCTGC
AGCAGGGTGCAGGTGGTACCGACGCTTT

BO14730.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG9573-PA 873 CG9573-RA 161..870 728..19 3500 99.7 Minus
CG14213-PB 915 CG14213-RB 307..414 609..502 340 92.5 Minus
CG14213-PA 915 CG14213-RA 307..414 609..502 340 92.5 Minus
CG14213-PB 915 CG14213-RB 575..671 341..245 210 88.6 Minus
CG14213-PA 915 CG14213-RA 575..671 341..245 210 88.6 Minus
CG14213-PB 915 CG14213-RB 829..864 87..52 180 100 Minus
CG14213-PA 915 CG14213-RA 829..864 87..52 180 100 Minus
CG14213-PB 915 CG14213-RB 768..800 148..116 140 96.9 Minus
CG14213-PA 915 CG14213-RA 768..800 148..116 140 96.9 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:59:59
Subject Length Description Subject Range Query Range Score Percent Strand
Rcd-1r-RA 1184 CG9573-RA 307..1016 728..19 3520 99.7 Minus
CG13102-RB 1835 CG13102-RB 739..1448 19..728 3520 99.7 Plus
Rcd-1-RC 1725 CG14213-RC 724..1398 726..52 1530 82.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:59:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9013053..9013762 19..728 3520 99.7 Plus
X 23542271 X 19639551..19639815 726..462 755 85.7 Minus
X 23542271 X 19639934..19640091 418..261 340 81 Minus
X 23542271 X 19640301..19640419 170..52 280 82.4 Minus
X 23542271 X 19640147..19640234 262..175 215 83 Minus
Blast to na_te.dros performed on 2015-02-11 11:59:56 has no hits.

BO14730.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:55 Download gff for BO14730.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9573-PA 161..873 18..728 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:33:31 Download gff for BO14730.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9573-PA 161..873 18..728 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 04:48:28 Download gff for BO14730.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13102-RB 739..1448 19..728 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:30:46 Download gff for BO14730.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13102-RB 739..1448 19..728 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:30:46 Download gff for BO14730.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 9013053..9013762 19..728 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 04:48:28 Download gff for BO14730.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9013053..9013762 19..728 99   Plus

BO14730.5prime Sequence

668 bp (667 high quality bases) assembled on 2006-06-16

> BO14730.5prime
GAAGTTATCAGTCGACATGAGTGCGGAACCAAGTCCGGTAATGAGTCCCC
AGCAGCAGGCCGAGCGGGAGAAGGTGTACCAGTTGATCATCGAGCTGGCC
TATCCTGCCACGCGGGAGACCGCTCTGCTGGAGCTGAGCAAGAACACCTA
TGCGGACCTGGCCCCCATGCTGTGGAAAAGCGTCGGTACCACCTGCACCC
TGCTGCAGGAGATCGTCAACATATACCCCATAATAACGACGCCCGTTTTG
AAGGCCAACCAGTCGAACCGCGTGTGCTACGCCCTGACTTTGCTACAGTG
CGTCGCCTCGCATCCGGAGACTCGCCCGGCCTTCCTGCGGGACCAGATAC
CGATGTACTTGTACCCCTTCTTGTCGACCACGTTCAAGAGCAGGCCCTTC
GAGCAGCTGCGCCTGACCACGCTGGGCGTGATTAATGCTCTGGCCGAGAC
CGGTGATACGGAGGTCCTCATCTTCCTGATATGGAGCGAGGTCGTGCCTC
ACTGTCTGACCAATATGGTCAGGGGATCGAAGCTGACCAAGATCGCGGCC
ACTTCAATCCTTGAGAAGATACTGCTCGATGAGATGGGTCTGACGTACAT
TTGCGAGAACCACGATCGCTTCTCGCAGGTGGCCATCACCCTGGGCAAAA
TGGTCATCCATATGTTGA

BO14730.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:26:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG9573-PA 873 CG9573-RA 1..652 17..668 3260 100 Plus
CG14213-PB 915 CG14213-RB 307..414 296..403 340 92.5 Plus
CG14213-PA 915 CG14213-RA 307..414 296..403 340 92.5 Plus
CG14213-PB 915 CG14213-RB 575..671 564..660 210 88.6 Plus
CG14213-PA 915 CG14213-RA 575..671 564..660 210 88.6 Plus
CG14213-PB 915 CG14213-RB 61..155 50..144 175 87.3 Plus
CG14213-PA 915 CG14213-RA 61..155 50..144 175 87.3 Plus
CG14213-PB 915 CG14213-RB 164..224 153..213 155 90.1 Plus
CG14213-PA 915 CG14213-RA 164..224 153..213 155 90.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:38:50
Subject Length Description Subject Range Query Range Score Percent Strand
Rcd-1r-RA 1184 CG9573-RA 147..798 17..668 3260 100 Plus
CG13102-RB 1835 CG13102-RB 957..1608 668..17 3260 100 Minus
Rcd-1-RA 1612 CG14213-RA 482..1092 50..660 1480 83.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:38:47
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9013271..9013922 668..17 3260 100 Minus
X 23542271 X 19639444..19639815 72..443 1020 84.9 Plus
X 23542271 X 19639934..19640091 487..644 340 81 Plus
Blast to na_te.dros performed on 2015-02-12 19:38:48 has no hits.

BO14730.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:34:56 Download gff for BO14730.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9573-PA 1..651 17..667 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:33:33 Download gff for BO14730.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9573-PA 1..651 17..667 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:30:43 Download gff for BO14730.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13102-RB 958..1610 13..667 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:04:14 Download gff for BO14730.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13102-RB 958..1610 13..667 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 00:04:14 Download gff for BO14730.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9013272..9013924 13..667 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:30:43 Download gff for BO14730.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9013272..9013924 13..667 99   Minus

BO14730.complete Sequence

904 bp (904 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633233

> BO14730.complete
GAAGTTATCAGTCGACATGAGTGCGGAACCAAGTCCGGTAATGAGTCCCC
AGCAGCAGGCCGAGCGGGAGAAGGTGTACCAGTTGATCATCGAGCTGGCC
TATCCTGCCACGCGGGAGACCGCTCTGCTGGAGCTGAGCAAGAACACCTA
TGCGGACCTGGCCCCCATGCTGTGGAAAAGCGTCGGTACCACCTGCACCC
TGCTGCAGGAGATCGTCAACATATACCCCATAATAACGACGCCCGTTTTG
AAGGCCAACCAGTCGAACCGCGTGTGCTACGCCCTGACTTTGCTACAGTG
CGTCGCCTCGCATCCGGAGACTCGCCCGGCCTTCCTGCGGGACCAGATAC
CGATGTACTTGTACCCCTTCTTGTCGACCACGTTCAAGAGCAGGCCCTTC
GAGCAGCTGCGCCTGACCACGCTGGGCGTGATTAATGCTCTGGCCGAGAC
CGGTGATACGGAGGTCCTCATCTTCCTGATATGGAGCGAGGTCGTGCCTC
ACTGTCTGACCAATATGGTCAGGGGATCGAAGCTGACCAAGATCGCGGCC
ACTTCAATCCTTGAGAAGATACTGCTCGATGAGATGGGTCTGACGTACAT
TTGCGAGAACCACGATCGCTTCTCGCAGGTGGCCATCACCCTGGGCAAAA
TGGTCATCCATATGTTGAAGTTTCCATGCCTCCGGGTGCTGAAGCATGTG
GTGCGCTGCTATCTACTACTTACGGAAAATGCGCGCGCTCGCAGTGCACT
TAGAGTGTGTCTGCCCGATCTGCTGCGTGACGGCACCTTCACGTCGCTCG
TCCAACATGACACGTGCACCAAGCAGTGGCTGCAGATGCTGCTCAAGAAC
CTGCAGACAAACGCCGTCAACCCAATGGGCTCCTCCGCAAGCTTTCTAGA
CCAT

BO14730.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:59:59
Subject Length Description Subject Range Query Range Score Percent Strand
Rcd-1r-RA 873 CG9573-PA 1..870 17..886 4320 99.8 Plus
Rcd-1-RA 915 CG14213-PA 61..864 50..853 1875 82.2 Plus
Rcd-1-RB 915 CG14213-PB 61..864 50..853 1875 82.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:00:00
Subject Length Description Subject Range Query Range Score Percent Strand
Rcd-1r-RA 1184 CG9573-RA 147..1016 17..886 4320 99.8 Plus
CG13102-RB 1835 CG13102-RB 739..1608 886..17 4320 99.8 Minus
Rcd-1-RA 1612 CG14213-RA 482..1285 50..853 1875 82.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:59:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9013053..9013922 886..17 4320 99.8 Minus
X 23542271 X 19639444..19639815 72..443 1020 84.9 Plus
X 23542271 X 19639934..19640091 487..644 340 81 Plus
X 23542271 X 19640301..19640419 735..853 280 82.4 Plus
X 23542271 X 19640147..19640234 643..730 215 83 Plus
Blast to na_te.dros performed on 2014-11-27 12:59:58 has no hits.

BO14730.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:53:55 Download gff for BO14730.complete
Subject Subject Range Query Range Percent Splice Strand
CG9573-RA 1..873 17..887 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:26:08 Download gff for BO14730.complete
Subject Subject Range Query Range Percent Splice Strand
CG9573-RA 147..1018 13..886 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:40:08 Download gff for BO14730.complete
Subject Subject Range Query Range Percent Splice Strand
CG13102-RB 737..1608 17..888 99   Minus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:53:55 Download gff for BO14730.complete
Subject Subject Range Query Range Percent Splice Strand
CG9573-RA 147..1018 13..886 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:08:56 Download gff for BO14730.complete
Subject Subject Range Query Range Percent Splice Strand
CG13102-RB 737..1608 17..888 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:08:56 Download gff for BO14730.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9013051..9013922 17..888 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:40:08 Download gff for BO14730.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9013051..9013922 17..888 99   Minus

BO14730.pep Sequence

Translation from 16 to 904

> BO14730.pep
MSAEPSPVMSPQQQAEREKVYQLIIELAYPATRETALLELSKNTYADLAP
MLWKSVGTTCTLLQEIVNIYPIITTPVLKANQSNRVCYALTLLQCVASHP
ETRPAFLRDQIPMYLYPFLSTTFKSRPFEQLRLTTLGVINALAETGDTEV
LIFLIWSEVVPHCLTNMVRGSKLTKIAATSILEKILLDEMGLTYICENHD
RFSQVAITLGKMVIHMLKFPCLRVLKHVVRCYLLLTENARARSALRVCLP
DLLRDGTFTSLVQHDTCTKQWLQMLLKNLQTNAVNPMGSSASFLDH

BO14730.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:38:17
Subject Length Description Subject Range Query Range Score Percent Strand
Rcd-1r-PA 290 CG9573-PA 1..290 1..290 1490 100 Plus
Rcd-1-PA 304 CG14213-PA 1..304 1..289 976 65.5 Plus
Rcd-1-PB 304 CG14213-PB 1..304 1..289 976 65.5 Plus
Rcd-1-PC 301 CG14213-PC 1..301 1..289 954 64.5 Plus
CG2053-PB 298 CG2053-PB 3..258 6..258 343 34.4 Plus