BO14739.complete Sequence
1066 bp (1066 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633234
> BO14739.complete
GAAGTTATCAGTCGACATGGCCAACAAATTCAGGAGTCTGAACAGCAAAC
TTTTCCAGCTGGCCATGAGCGGCATCCAGCGGACATCGGTGCGTCCGCGG
ATAAGTTTTCCGGGTCGTGGAAGCGGCTTTACTGGAAATCGCAAGCTGCT
GGGAGCCCTGGGAGCCCTAACCGGAACAGCAGGGCTGCTGATCTACGCCC
TGGAAACCAGCGTGGATGCCTCCTCGGACTGCGTGCATCCGGCCCACCAG
CACTGGAATCACAAAGGGCTTTTGTCCGCATTGGACAAGGAGAGCGTGCG
TCGAGGTTACACCGTTTACAAGGAGGTCTGCTCCTCCTGCCACTCATTGC
AGTACATGGCCTATCGCAACCTGGTGGGAGTGTGCATGACGGAGGCGGAG
GCCAAGGCCGAGGCGGAGGCCATCACGGTGCGGGATGGGCCCAACGAGGA
GGGCGAGTACTACGAGCGTCCCGGCAAGCTGTCCGATCACTTCCCCTCTC
CGTACGCCAACGAGGAGGCGGCCCGTTCCGCCAACAATGGCTCCTATCCG
CCGGATCTCAGCTATATTGTGTCGGCTCGCAAGGGCGGCGAGGATTACGT
GTTCTCCCTGCTCACCGGATACTGTGATCCTCCGGCTGGGTTTGCCCTTC
GTGATGGACTGTACTTCAATCCGTACTTCTCGGGCGGAGCGATTGCCATG
GGCAAGGTAGTTGACAATGAGGTGGTCTCCTTTGAAGATCCAAATGTGCC
TGCTTCGGCCGCCCAAATTGCCAAGGATGTGTGCGTCTTCCTCAAGTGGA
CTTCAGAACCGGAGACCGACGAACGTCGCCTGCTGCTCATCAAAGTTACT
CTGATTTCGACCTTTTTGATTGGCATTTCCTACTACATCAAGCGTTTTAA
GTGGTCAACGCTCAAGTCTCGCAAGATCTTCTTCATTCCCGAACTGGAGG
CCCAGGCCAAAAGAGAGGCGGAGGAGGCCGCCAAAGCAGCGCGCAAGGCC
AAGGAGCAGGAGTGCAACAAGTGCGAGAACCAGAACGAGAAGAAGGACGC
AAGCTTTCTAGACCAT
BO14739.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:12:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14508-RA | 1035 | CG14508-PA | 1..1032 | 17..1048 | 5130 | 99.8 | Plus |
| CG4769-RB | 924 | CG4769-PB | 228..676 | 253..701 | 655 | 76.4 | Plus |
| CG4769-RA | 924 | CG4769-PA | 228..676 | 253..701 | 655 | 76.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:12:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14508-RA | 1293 | CG14508-RA | 218..1249 | 17..1048 | 5130 | 99.8 | Plus |
| CG4769-RB | 1145 | CG4769-RB | 357..805 | 253..701 | 655 | 76.4 | Plus |
| CG4769-RA | 1521 | CG4769-RA | 357..805 | 253..701 | 655 | 76.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:12:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29202704..29203735 | 1048..17 | 5130 | 99.8 | Minus |
| 3L | 28110227 | 3L | 5361734..5361968 | 467..701 | 500 | 80.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:12:02 has no hits.
BO14739.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:53 Download gff for
BO14739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14508-RA | 1..1035 | 17..1052 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:45 Download gff for
BO14739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14508-RA | 218..1256 | 17..1057 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:04:41 Download gff for
BO14739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14508-RA | 218..1249 | 17..1050 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:53 Download gff for
BO14739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14508-RA | 218..1256 | 17..1057 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:04 Download gff for
BO14739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14508-RA | 218..1249 | 17..1050 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:17:04 Download gff for
BO14739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29202702..29203735 | 17..1050 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:04:41 Download gff for
BO14739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25028424..25029457 | 17..1050 | 99 | | Minus |
BO14739.pep Sequence
Translation from 16 to 1066
> BO14739.pep
MANKFRSLNSKLFQLAMSGIQRTSVRPRISFPGRGSGFTGNRKLLGALGA
LTGTAGLLIYALETSVDASSDCVHPAHQHWNHKGLLSALDKESVRRGYTV
YKEVCSSCHSLQYMAYRNLVGVCMTEAEAKAEAEAITVRDGPNEEGEYYE
RPGKLSDHFPSPYANEEAARSANNGSYPPDLSYIVSARKGGEDYVFSLLT
GYCDPPAGFALRDGLYFNPYFSGGAIAMGKVVDNEVVSFEDPNVPASAAQ
IAKDVCVFLKWTSEPETDERRLLLIKVTLISTFLIGISYYIKRFKWSTLK
SRKIFFIPELEAQAKREAEEAAKAARKAKEQECNKCENQNEKKDASFLDH
BO14739.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:06:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14508-PA | 344 | CG14508-PA | 1..344 | 1..344 | 1794 | 100 | Plus |
| CG4769-PB | 307 | CG4769-PB | 32..305 | 35..309 | 1010 | 70.5 | Plus |
| CG4769-PA | 307 | CG4769-PA | 32..305 | 35..309 | 1010 | 70.5 | Plus |
