Clone BO14750 Report

Search the DGRC for BO14750

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:147
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptCG2604-RA
Protein status:BO14750.pep: validated full length
Sequenced Size:1324

Clone Sequence Records

BO14750.5prime Sequence

792 bp (719 high quality bases) assembled on 2006-06-02

> BO14750.5prime
GAAGTTATCAGTCGACATGTCTGGCGATCGACTGGATGTGATTATCTTTG
GGGCCAGTGGCTTCACCGGCAAGTACACGGTCTTCGAGGCGGTCACGGTG
CTGCGCGGCTTGCGATGGGGCATCGCTGGCAGGAACCGCGAGAAGCTGGA
GGCGGTGTTGAAGGAGATGGGCGCCAAGGCCAAGAAGGACCTCTCGCAGG
TGCCCATCTTCATCGCGGACGTCAACGACCAGGCCTCCCTGCTTGAGATG
GCGAAAAAGTGCCGGATTGTGGTGAACACGGCAGGACCCTACCGCTTTCA
CGGCGAAAACGTCGTGAAGTGCTGCATCGAATCGGGCACGCACCATGTGG
ACGTTAGCGGCGAGCCCCAGTACATGGAGACCATGCAGCTGAGGTACGAT
CAGCTGGCCAGGGAAAAGGGCGTGTACGTGGTCAGCGCCTGCGGCTTTGA
CTCCATACCCGCCGACATGGGCGTCGTCTTTGTGGAAAAAAACTTCGACG
GCGTGGTGAACTCCGTGGAGACCTTCCTGGAGACCGGAATCAAAGAAGGC
GGCAGTGGCGGAGGCACTGCCGGCCTCAACTACGGAACCTGGGAGAGCGC
CGTTTACGGGCTAGCTCACTCTGACGAGCTGCGCGGCATCCGGAAGCAGA
TCTATCCCCAGAGACTGCCAAGATTCTATCCCTTTCTCAAGCCACGACCG
CTGGTCTTCCGCTCTACCGAGGTTGACAAGGTGTGTCTACCTTTTTCCGG
CTCCGACCGCTCGTTGGTAATGAGGTCCCAGCGCTTCCTCTA

BO14750.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG2604-PA 1293 CG2604-RA 1..776 17..792 3805 99.6 Plus
CG2604-PC 1293 CG2604-RC 1..776 17..792 3805 99.6 Plus
CG2604-PB 1293 CG2604-RB 1..776 17..792 3805 99.6 Plus
CG5167-PA 1296 CG5167-RA 403..455 419..471 140 90.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:06:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG2604-RB 1636 CG2604-RB 133..912 13..792 3840 99.5 Plus
CG2604-RC 1631 CG2604-RC 128..907 13..792 3840 99.5 Plus
CG2604-RA 1581 CG2604-RA 170..949 13..792 3840 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:06:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5222356..5223135 792..13 3840 99.5 Minus
3R 32079331 3R 12406738..12407232 31..525 840 78 Plus
Blast to na_te.dros performed on 2015-02-11 13:06:52 has no hits.

BO14750.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:35:17 Download gff for BO14750.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2604-PB 1..775 17..791 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:00 Download gff for BO14750.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2604-PB 1..775 17..791 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:06:43 Download gff for BO14750.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2604-RA 164..948 5..791 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:37:23 Download gff for BO14750.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2604-RA 164..948 5..791 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:37:23 Download gff for BO14750.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 5222357..5223141 5..791 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:06:43 Download gff for BO14750.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1048079..1048863 5..791 99   Minus

BO14750.complete Sequence

1324 bp (1324 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633236

> BO14750.complete
GAAGTTATCAGTCGACATGTCTGGCGATCGACTGGATGTGATTATCTTTG
GGGCCAGTGGCTTCACCGGCAAGTACACGGTCTTCGAGGCGGTCACGGTG
CTGCGCGGCTTGCGATGGGGCATCGCTGGCAGGAACCGCGAGAAGCTGGA
GGCGGTGTTGAAGGAGATGGGCGCCAAGGCCAAGAAGGACCTCTCGCAGG
TGCCCATCTTCATCGCGGACGTCAACGACCAGGCCTCCCTGCTTGAGATG
GCGAAAAAGTGCCGGATTGTGGTGAACACGGCAGGACCCTACCGCTTTCA
CGGCGAAAACGTCGTGAAGTGCTGCATCGAATCGGGCACGCACCATGTGG
ACGTTAGCGGCGAGCCCCAGTACATGGAGACCATGCAGCTGAGGTACGAT
CAGCTGGCCAGGGAAAAGGGCGTGTACGTGGTCAGCGCCTGCGGCTTTGA
CTCCATACCCGCCGACATGGGCGTCGTCTTTGTGGAAAAAAACTTCGACG
GCGTGGTGAACTCCGTGGAGACCTTCCTGGAGACCGGAATCAAAGAAGGC
GGCAGTGGCGGAGGCACTGCCGGCCTCAACTACGGAACCTGGGAGAGCGC
CGTTTACGGGCTAGCTCACTCTGACGAGCTGCGCGGCATCCGGAAGCAGA
TCTATCCCCAGAGACTGCCAAGATTCTATCCCTTTCTCAAGCCACGACCG
CTGGTCTTCCGCTCTACCGAGGTTGACAAGGTGTGTCTACCTTTTCCCGG
CTCCGACCGCTCGGTGGTAATGAGGTCCCAGCGCTTCCTCTACGACCAGG
ACAAGAAACGTCCGGTCCAGATGCAGGCCTACGTGGGATTTTCGTCTTGG
CTGGTCGCCGGCGGTGTCATCTTTTTTGCCACCATCTTCGGTCTGCTGTC
AAAGTTCAAGCTGGGACGTACGCTGCTGCTCAATTACCCCGGTCTCTTCT
CCGGCGGATTGGCCTCTCGTTCCGGCCCAAGTGAGGAGTCAATGGAGCGC
ACCTATTTCAAGATGACTTTTAAGGCCAGTGGCTGGCTTAAGAGCGATCG
CCTGGCCGAGAGTTCAAACCAATACACGGAGTCCCCGACCAAGACGCTGA
TGGTCCGCGTATCGGGCATGAATCCCGGATATGGAGCCACCTGCGTGGCT
GTGCTCTCAGCGGCACTGACCATTCTTCGTGAGTCGGACAAGATGCCCAG
CACAGGCGGAGTGCTGCCTCCAGCTGCCGCCTTCTCTAAGACCGGACTAA
TTAGCGAGTTGGAGAAGCACGACCACGGCATCAAGTTTGAGATTCTGGCC
AACAAGGCAAGCTTTCTAGACCAT

BO14750.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:10:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG2604-RB 1293 CG2604-PB 1..1290 17..1306 6435 99.9 Plus
CG2604-RC 1293 CG2604-PC 1..1290 17..1306 6435 99.9 Plus
CG2604-RA 1293 CG2604-PA 1..1290 17..1306 6435 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:10:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG2604-RB 1636 CG2604-RB 133..1426 13..1306 6440 99.8 Plus
CG2604-RC 1631 CG2604-RC 128..1421 13..1306 6440 99.8 Plus
CG2604-RA 1581 CG2604-RA 170..1463 13..1306 6440 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:10:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5221842..5223135 1306..13 6440 99.8 Minus
3R 32079331 3R 12406738..12407232 31..525 840 78 Plus
3R 32079331 3R 12407468..12408015 758..1305 310 70.4 Plus
Blast to na_te.dros performed on 2014-11-27 14:10:10 has no hits.

BO14750.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:39 Download gff for BO14750.complete
Subject Subject Range Query Range Percent Splice Strand
CG2604-RB 1..1293 17..1310 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:28 Download gff for BO14750.complete
Subject Subject Range Query Range Percent Splice Strand
CG2604-RB 132..1434 5..1310 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:35:29 Download gff for BO14750.complete
Subject Subject Range Query Range Percent Splice Strand
CG2604-RA 174..1463 17..1308 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:39 Download gff for BO14750.complete
Subject Subject Range Query Range Percent Splice Strand
CG2604-RB 132..1434 5..1310 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:04:58 Download gff for BO14750.complete
Subject Subject Range Query Range Percent Splice Strand
CG2604-RA 174..1463 17..1308 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:04:58 Download gff for BO14750.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5221840..5223131 17..1308 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:35:29 Download gff for BO14750.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1047562..1048853 17..1308 99   Minus

BO14750.pep Sequence

Translation from 16 to 1324

> BO14750.pep
MSGDRLDVIIFGASGFTGKYTVFEAVTVLRGLRWGIAGRNREKLEAVLKE
MGAKAKKDLSQVPIFIADVNDQASLLEMAKKCRIVVNTAGPYRFHGENVV
KCCIESGTHHVDVSGEPQYMETMQLRYDQLAREKGVYVVSACGFDSIPAD
MGVVFVEKNFDGVVNSVETFLETGIKEGGSGGGTAGLNYGTWESAVYGLA
HSDELRGIRKQIYPQRLPRFYPFLKPRPLVFRSTEVDKVCLPFPGSDRSV
VMRSQRFLYDQDKKRPVQMQAYVGFSSWLVAGGVIFFATIFGLLSKFKLG
RTLLLNYPGLFSGGLASRSGPSEESMERTYFKMTFKASGWLKSDRLAESS
NQYTESPTKTLMVRVSGMNPGYGATCVAVLSAALTILRESDKMPSTGGVL
PPAAAFSKTGLISELEKHDHGIKFEILANKASFLDH

BO14750.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:46:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG2604-PB 430 CG2604-PB 1..430 1..430 2224 100 Plus
CG2604-PC 430 CG2604-PC 1..430 1..430 2224 100 Plus
CG2604-PA 430 CG2604-PA 1..430 1..430 2224 100 Plus
CG5167-PA 431 CG5167-PA 1..431 1..430 1604 70.1 Plus