Clone Sequence Records
BO14750.5prime Sequence
792 bp (719 high quality bases) assembled on 2006-06-02
> BO14750.5prime
GAAGTTATCAGTCGACATGTCTGGCGATCGACTGGATGTGATTATCTTTG
GGGCCAGTGGCTTCACCGGCAAGTACACGGTCTTCGAGGCGGTCACGGTG
CTGCGCGGCTTGCGATGGGGCATCGCTGGCAGGAACCGCGAGAAGCTGGA
GGCGGTGTTGAAGGAGATGGGCGCCAAGGCCAAGAAGGACCTCTCGCAGG
TGCCCATCTTCATCGCGGACGTCAACGACCAGGCCTCCCTGCTTGAGATG
GCGAAAAAGTGCCGGATTGTGGTGAACACGGCAGGACCCTACCGCTTTCA
CGGCGAAAACGTCGTGAAGTGCTGCATCGAATCGGGCACGCACCATGTGG
ACGTTAGCGGCGAGCCCCAGTACATGGAGACCATGCAGCTGAGGTACGAT
CAGCTGGCCAGGGAAAAGGGCGTGTACGTGGTCAGCGCCTGCGGCTTTGA
CTCCATACCCGCCGACATGGGCGTCGTCTTTGTGGAAAAAAACTTCGACG
GCGTGGTGAACTCCGTGGAGACCTTCCTGGAGACCGGAATCAAAGAAGGC
GGCAGTGGCGGAGGCACTGCCGGCCTCAACTACGGAACCTGGGAGAGCGC
CGTTTACGGGCTAGCTCACTCTGACGAGCTGCGCGGCATCCGGAAGCAGA
TCTATCCCCAGAGACTGCCAAGATTCTATCCCTTTCTCAAGCCACGACCG
CTGGTCTTCCGCTCTACCGAGGTTGACAAGGTGTGTCTACCTTTTTCCGG
CTCCGACCGCTCGTTGGTAATGAGGTCCCAGCGCTTCCTCTA
BO14750.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2604-PA | 1293 | CG2604-RA | 1..776 | 17..792 | 3805 | 99.6 | Plus |
CG2604-PC | 1293 | CG2604-RC | 1..776 | 17..792 | 3805 | 99.6 | Plus |
CG2604-PB | 1293 | CG2604-RB | 1..776 | 17..792 | 3805 | 99.6 | Plus |
CG5167-PA | 1296 | CG5167-RA | 403..455 | 419..471 | 140 | 90.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:06:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2604-RB | 1636 | CG2604-RB | 133..912 | 13..792 | 3840 | 99.5 | Plus |
CG2604-RC | 1631 | CG2604-RC | 128..907 | 13..792 | 3840 | 99.5 | Plus |
CG2604-RA | 1581 | CG2604-RA | 170..949 | 13..792 | 3840 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:06:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5222356..5223135 | 792..13 | 3840 | 99.5 | Minus |
3R | 32079331 | 3R | 12406738..12407232 | 31..525 | 840 | 78 | Plus |
Blast to na_te.dros performed on 2015-02-11 13:06:52 has no hits.
BO14750.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:35:17 Download gff for
BO14750.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2604-PB | 1..775 | 17..791 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:00 Download gff for
BO14750.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2604-PB | 1..775 | 17..791 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:06:43 Download gff for
BO14750.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2604-RA | 164..948 | 5..791 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:37:23 Download gff for
BO14750.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2604-RA | 164..948 | 5..791 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:37:23 Download gff for
BO14750.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5222357..5223141 | 5..791 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:06:43 Download gff for
BO14750.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1048079..1048863 | 5..791 | 99 | | Minus |
BO14750.complete Sequence
1324 bp (1324 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633236
> BO14750.complete
GAAGTTATCAGTCGACATGTCTGGCGATCGACTGGATGTGATTATCTTTG
GGGCCAGTGGCTTCACCGGCAAGTACACGGTCTTCGAGGCGGTCACGGTG
CTGCGCGGCTTGCGATGGGGCATCGCTGGCAGGAACCGCGAGAAGCTGGA
GGCGGTGTTGAAGGAGATGGGCGCCAAGGCCAAGAAGGACCTCTCGCAGG
TGCCCATCTTCATCGCGGACGTCAACGACCAGGCCTCCCTGCTTGAGATG
GCGAAAAAGTGCCGGATTGTGGTGAACACGGCAGGACCCTACCGCTTTCA
CGGCGAAAACGTCGTGAAGTGCTGCATCGAATCGGGCACGCACCATGTGG
ACGTTAGCGGCGAGCCCCAGTACATGGAGACCATGCAGCTGAGGTACGAT
CAGCTGGCCAGGGAAAAGGGCGTGTACGTGGTCAGCGCCTGCGGCTTTGA
CTCCATACCCGCCGACATGGGCGTCGTCTTTGTGGAAAAAAACTTCGACG
GCGTGGTGAACTCCGTGGAGACCTTCCTGGAGACCGGAATCAAAGAAGGC
GGCAGTGGCGGAGGCACTGCCGGCCTCAACTACGGAACCTGGGAGAGCGC
CGTTTACGGGCTAGCTCACTCTGACGAGCTGCGCGGCATCCGGAAGCAGA
TCTATCCCCAGAGACTGCCAAGATTCTATCCCTTTCTCAAGCCACGACCG
CTGGTCTTCCGCTCTACCGAGGTTGACAAGGTGTGTCTACCTTTTCCCGG
CTCCGACCGCTCGGTGGTAATGAGGTCCCAGCGCTTCCTCTACGACCAGG
ACAAGAAACGTCCGGTCCAGATGCAGGCCTACGTGGGATTTTCGTCTTGG
CTGGTCGCCGGCGGTGTCATCTTTTTTGCCACCATCTTCGGTCTGCTGTC
AAAGTTCAAGCTGGGACGTACGCTGCTGCTCAATTACCCCGGTCTCTTCT
CCGGCGGATTGGCCTCTCGTTCCGGCCCAAGTGAGGAGTCAATGGAGCGC
ACCTATTTCAAGATGACTTTTAAGGCCAGTGGCTGGCTTAAGAGCGATCG
CCTGGCCGAGAGTTCAAACCAATACACGGAGTCCCCGACCAAGACGCTGA
TGGTCCGCGTATCGGGCATGAATCCCGGATATGGAGCCACCTGCGTGGCT
GTGCTCTCAGCGGCACTGACCATTCTTCGTGAGTCGGACAAGATGCCCAG
CACAGGCGGAGTGCTGCCTCCAGCTGCCGCCTTCTCTAAGACCGGACTAA
TTAGCGAGTTGGAGAAGCACGACCACGGCATCAAGTTTGAGATTCTGGCC
AACAAGGCAAGCTTTCTAGACCAT
BO14750.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:10:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2604-RB | 1293 | CG2604-PB | 1..1290 | 17..1306 | 6435 | 99.9 | Plus |
CG2604-RC | 1293 | CG2604-PC | 1..1290 | 17..1306 | 6435 | 99.9 | Plus |
CG2604-RA | 1293 | CG2604-PA | 1..1290 | 17..1306 | 6435 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:10:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2604-RB | 1636 | CG2604-RB | 133..1426 | 13..1306 | 6440 | 99.8 | Plus |
CG2604-RC | 1631 | CG2604-RC | 128..1421 | 13..1306 | 6440 | 99.8 | Plus |
CG2604-RA | 1581 | CG2604-RA | 170..1463 | 13..1306 | 6440 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:10:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5221842..5223135 | 1306..13 | 6440 | 99.8 | Minus |
3R | 32079331 | 3R | 12406738..12407232 | 31..525 | 840 | 78 | Plus |
3R | 32079331 | 3R | 12407468..12408015 | 758..1305 | 310 | 70.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:10:10 has no hits.
BO14750.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:39 Download gff for
BO14750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2604-RB | 1..1293 | 17..1310 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:28 Download gff for
BO14750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2604-RB | 132..1434 | 5..1310 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:35:29 Download gff for
BO14750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2604-RA | 174..1463 | 17..1308 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:39 Download gff for
BO14750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2604-RB | 132..1434 | 5..1310 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:04:58 Download gff for
BO14750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2604-RA | 174..1463 | 17..1308 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:04:58 Download gff for
BO14750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5221840..5223131 | 17..1308 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:35:29 Download gff for
BO14750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1047562..1048853 | 17..1308 | 99 | | Minus |
BO14750.pep Sequence
Translation from 16 to 1324
> BO14750.pep
MSGDRLDVIIFGASGFTGKYTVFEAVTVLRGLRWGIAGRNREKLEAVLKE
MGAKAKKDLSQVPIFIADVNDQASLLEMAKKCRIVVNTAGPYRFHGENVV
KCCIESGTHHVDVSGEPQYMETMQLRYDQLAREKGVYVVSACGFDSIPAD
MGVVFVEKNFDGVVNSVETFLETGIKEGGSGGGTAGLNYGTWESAVYGLA
HSDELRGIRKQIYPQRLPRFYPFLKPRPLVFRSTEVDKVCLPFPGSDRSV
VMRSQRFLYDQDKKRPVQMQAYVGFSSWLVAGGVIFFATIFGLLSKFKLG
RTLLLNYPGLFSGGLASRSGPSEESMERTYFKMTFKASGWLKSDRLAESS
NQYTESPTKTLMVRVSGMNPGYGATCVAVLSAALTILRESDKMPSTGGVL
PPAAAFSKTGLISELEKHDHGIKFEILANKASFLDH
BO14750.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:46:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2604-PB | 430 | CG2604-PB | 1..430 | 1..430 | 2224 | 100 | Plus |
CG2604-PC | 430 | CG2604-PC | 1..430 | 1..430 | 2224 | 100 | Plus |
CG2604-PA | 430 | CG2604-PA | 1..430 | 1..430 | 2224 | 100 | Plus |
CG5167-PA | 431 | CG5167-PA | 1..431 | 1..430 | 1604 | 70.1 | Plus |