Clone BO14754 Report

Search the DGRC for BO14754

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:147
Well:54
Vector:pDNR-Dual
Associated Gene/TranscriptCG5017-RA
Protein status:BO14754.pep: validated full length
Sequenced Size:883

Clone Sequence Records

BO14754.3prime Sequence

705 bp (691 high quality bases) assembled on 2006-06-02

> BO14754.3prime
ATGGTCTAGAAAGCTTGCCTTGTCGACGCCATCCTCCTCTTCGGCATCCG
ACTCGTCCTCGGTATCTTCCGACTCGGTCTCCGATCCGCTGGAGCTCTGA
CAATCGGCAATCTCGCCGGTGAAGAAGATCACCGCCTTGGGAATCACGCG
CTCCTTTAGATAGAAGCCCACCTCAAAATCGTTTTGCAGCATAGCATTGA
CGTCACAGTAGTTGGGGTCAAGGGTATCTTCTGGCAAAAGCGGCGGCGAG
AAGAACTCAAAGAACGACGGCTCTTGATTTTCGGTTTTGGTCTGGTCCTT
GGTCTGCTTCCAGTCGATGACGCAGCCTTCGCACTTGTAGATCTCGGCGC
CATCATATGCGAGCGGATCGTCTGGATCCGGCAGGCAGTTGAGGAAATAT
GTCTTGGTCAGCACCGTGTTGGTAAAGTAATCATTGGGATCGAAGTGGAA
TTCGATATCAAACTTCACCACGGGTTCGTTGTACAGCCGAGAACGGATGT
CGCTTAAGCACTCTAATATTTTCTCATCCCTCTTGCTGATGAACTCGGTG
TACGATGCTTTGAGAACCCTCAGCCAAAAGTTGGGCACGCTCTGATTGGT
TTCCACGTCACCGTGGTTTTGCTTTCTAAACTCATCTAGAATCTTCTTGC
GCTTATCAAATATGATATTGTGCTTATCCTCGTACTTCTTCTCGATATTG
TAAAT

BO14754.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG5017-PA 852 CG5017-RA 163..849 705..19 3410 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:10:28
Subject Length Description Subject Range Query Range Score Percent Strand
mil-RA 1097 CG5017-RA 284..970 705..19 3420 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 07:10:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27913052..27913282 512..282 1155 100 Minus
3R 32079331 3R 27913482..27913658 195..19 885 100 Minus
3R 32079331 3R 27912866..27912989 634..511 605 99.2 Minus
3R 32079331 3R 27913341..27913428 282..195 440 100 Minus
3R 32079331 3R 27912730..27912800 705..635 355 100 Minus
Blast to na_te.dros performed on 2015-02-03 07:10:24 has no hits.

BO14754.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:35:20 Download gff for BO14754.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5017-PA 163..852 15..705 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:05 Download gff for BO14754.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5017-PA 163..852 15..705 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:36:10 Download gff for BO14754.3prime
Subject Subject Range Query Range Percent Splice Strand
hanabi-RA 284..978 10..705 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:42:33 Download gff for BO14754.3prime
Subject Subject Range Query Range Percent Splice Strand
mil-RA 284..978 10..705 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:42:33 Download gff for BO14754.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 27912730..27912800 635..705 100 -> Minus
3R 27912866..27912989 511..634 99 -> Minus
3R 27913054..27913282 282..510 100 -> Minus
3R 27913342..27913427 196..281 100 -> Minus
3R 27913482..27913666 10..195 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:36:10 Download gff for BO14754.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 23738452..23738522 635..705 100 -> Minus
arm_3R 23738588..23738711 511..634 99 -> Minus
arm_3R 23738776..23739004 282..510 100 -> Minus
arm_3R 23739064..23739149 196..281 100 -> Minus
arm_3R 23739204..23739388 10..195 97   Minus

BO14754.5prime Sequence

748 bp (699 high quality bases) assembled on 2006-06-02

> BO14754.5prime
GAAGTTATCAGTCGACATGGAAACTGTGCGAAATCGAAACCCTCCGCGGA
TGAAGTACACCGCTCCACCGAAGATGGAATCGGATTTAAACTTCACCGAG
AAGGAGAAGAAAACTCTTACCGAACTGAAGCAGCTCTATTTGGAGACCAT
TAACCTGGATGTGGCTCTGCAGCGCGACATTTACAATATCGAGAAGAAGT
ACGAGGATAAGCACAATATCATATTTGATAAGCGCAAGAAGATTCTAGAT
GAGTTTAGAAAGCAAAACCACGGTGACGTGGAAACCAATCAGAGCGTGCC
CAACTTTTGGCTGAGGGTTCTCAAAGCATCGTACACCGAGTTCATCAGCA
AGAGGGATGAGAAAATATTAGAGTGCTTAAGCGACATCCGTTCTCGGCTG
TACAACGAACCCGTGGTGAAGTTTGATATCGAATTCCACTTCGATCCCAA
TGATTACTTTACCAACACGGTGCTGACCAAGACATATTTCCTCAACTGCC
TGCCGGATCCAGACGATCCGCTCGCATATGATGGCGCCGAGATCTACAAG
TGCGAAGGCTGCGTCATCGACTGGAAGCAGACCAAGGACCAGACCAAAAC
CGAAAATCAAGAGCCGTCGTTCTTTGAGTTCTTCTCGCCGCCGCTTTTGC
CAGAAGATACCCTTGACCCCAACTACTGTGACGTCAATGCTATGCTGCAA
AACGATTTTGAGGTGGGCTTCTATCTAAAGGAGCGCGTGATTCCCAAG

BO14754.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG5017-PA 852 CG5017-RA 1..732 17..748 3635 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:07:01
Subject Length Description Subject Range Query Range Score Percent Strand
mil-RA 1097 CG5017-RA 122..853 17..748 3645 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 19:06:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27912568..27912800 17..249 1165 100 Plus
3R 32079331 3R 27913052..27913282 372..602 1155 100 Plus
3R 32079331 3R 27912866..27912989 250..373 605 99.2 Plus
3R 32079331 3R 27913341..27913428 602..689 440 100 Plus
3R 32079331 3R 27913482..27913541 689..748 300 100 Plus
Blast to na_te.dros performed on 2015-02-11 19:07:00 has no hits.

BO14754.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:35:21 Download gff for BO14754.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5017-PA 1..732 17..748 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:06 Download gff for BO14754.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5017-PA 1..732 17..748 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:56:52 Download gff for BO14754.5prime
Subject Subject Range Query Range Percent Splice Strand
hanabi-RA 117..853 9..748 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:58:17 Download gff for BO14754.5prime
Subject Subject Range Query Range Percent Splice Strand
mil-RA 117..853 9..748 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 23:58:17 Download gff for BO14754.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 27912563..27912800 9..249 98 -> Plus
3R 27912866..27912989 250..373 99 -> Plus
3R 27913054..27913282 374..602 100 -> Plus
3R 27913342..27913427 603..688 100 -> Plus
3R 27913482..27913541 689..748 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:56:52 Download gff for BO14754.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 23738776..23739004 374..602 100 -> Plus
arm_3R 23739064..23739149 603..688 100 -> Plus
arm_3R 23739204..23739263 689..748 100   Plus
arm_3R 23738285..23738522 9..249 98 -> Plus
arm_3R 23738588..23738711 250..373 99 -> Plus

BO14754.complete Sequence

883 bp (883 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633238

> BO14754.complete
GAAGTTATCAGTCGACATGGAAACTGTGCGAAATCGAAACCCTCCGCGGA
TGAAGTACACCGCTCCACCGAAGATGGAATCGGATTTAAACTTCACCGAG
AAGGAGAAGAAAACTCTTACCGAACTGAAGCAGCTCTATTTGGAGACCAT
TAACCTGGATGTGGCTCTGCAGCGCGACATTTACAATATCGAGAAGAAGT
ACGAGGATAAGCACAATATCATATTTGATAAGCGCAAGAAGATTCTAGAT
GAGTTTAGAAAGCAAAACCACGGTGACGTGGAAACCAATCAGAGCGTGCC
CAACTTTTGGCTGAGGGTTCTCAAAGCATCGTACACCGAGTTCATCAGCA
AGAGGGATGAGAAAATATTAGAGTGCTTAAGCGACATCCGTTCTCGGCTG
TACAACGAACCCGTGGTGAAGTTTGATATCGAATTCCACTTCGATCCCAA
TGATTACTTTACCAACACGGTGCTGACCAAGACATATTTCCTCAACTGCC
TGCCGGATCCAGACGATCCGCTCGCATATGATGGCGCCGAGATCTACAAG
TGCGAAGGCTGCGTCATCGACTGGAAGCAGACCAAGGACCAGACCAAAAC
CGAAAATCAAGAGCCGTCGTTCTTTGAGTTCTTCTCGCCGCCGCTTTTGC
CAGAAGATACCCTTGACCCCAACTACTGTGACGTCAATGCTATGCTGCAA
AACGATTTTGAGGTGGGCTTCTATCTAAAGGAGCGCGTGATTCCCAAGGC
GGTGATCTTCTTCACCGGCGAGATTGCCGATTGTCAGAGCTCCAGCGGAT
CGGAGACCGAGTCGGAAGATACCGAGGACGAGTCGGATGCCGAAGAGGAG
GATGGCGTCGACAAGGCAAGCTTTCTAGACCAT

BO14754.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:20:16
Subject Length Description Subject Range Query Range Score Percent Strand
mil-RA 852 CG5017-PA 1..849 17..865 4230 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:20:17
Subject Length Description Subject Range Query Range Score Percent Strand
mil-RA 1097 CG5017-RA 122..970 17..865 4230 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:20:14
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27912568..27912800 17..249 1165 100 Plus
3R 32079331 3R 27913052..27913282 372..602 1155 100 Plus
3R 32079331 3R 27913482..27913658 689..865 885 100 Plus
3R 32079331 3R 27912866..27912989 250..373 605 99.2 Plus
3R 32079331 3R 27913341..27913428 602..689 440 100 Plus
Blast to na_te.dros performed on 2014-11-27 10:20:15 has no hits.

BO14754.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:41 Download gff for BO14754.complete
Subject Subject Range Query Range Percent Splice Strand
CG5017-RA 1..852 17..869 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:32 Download gff for BO14754.complete
Subject Subject Range Query Range Percent Splice Strand
CG5017-RA 117..978 9..874 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:17:40 Download gff for BO14754.complete
Subject Subject Range Query Range Percent Splice Strand
hanabi-RA 122..970 17..867 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:41 Download gff for BO14754.complete
Subject Subject Range Query Range Percent Splice Strand
CG5017-RA 117..978 9..874 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:19:07 Download gff for BO14754.complete
Subject Subject Range Query Range Percent Splice Strand
mil-RA 122..970 17..867 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:19:07 Download gff for BO14754.complete
Subject Subject Range Query Range Percent Splice Strand
3R 27913482..27913658 689..867 98   Plus
3R 27912568..27912800 17..249 100 -> Plus
3R 27912866..27912989 250..373 99 -> Plus
3R 27913054..27913282 374..602 100 -> Plus
3R 27913342..27913427 603..688 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:17:40 Download gff for BO14754.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 23738290..23738522 17..249 100 -> Plus
arm_3R 23738588..23738711 250..373 99 -> Plus
arm_3R 23738776..23739004 374..602 100 -> Plus
arm_3R 23739064..23739149 603..688 100 -> Plus
arm_3R 23739204..23739380 689..867 98   Plus

BO14754.pep Sequence

Translation from 16 to 883

> BO14754.pep
METVRNRNPPRMKYTAPPKMESDLNFTEKEKKTLTELKQLYLETINLDVA
LQRDIYNIEKKYEDKHNIIFDKRKKILDEFRKQNHGDVETNQSVPNFWLR
VLKASYTEFISKRDEKILECLSDIRSRLYNEPVVKFDIEFHFDPNDYFTN
TVLTKTYFLNCLPDPDDPLAYDGAEIYKCEGCVIDWKQTKDQTKTENQEP
SFFEFFSPPLLPEDTLDPNYCDVNAMLQNDFEVGFYLKERVIPKAVIFFT
GEIADCQSSSGSETESEDTEDESDAEEEDGVDKASFLDH

BO14754.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:46:35
Subject Length Description Subject Range Query Range Score Percent Strand
mil-PA 283 CG5017-PA 1..283 1..283 1512 100 Plus
Nap1-PC 370 CG5330-PC 60..347 37..277 425 33.7 Plus
Nap1-PB 370 CG5330-PB 60..347 37..277 425 33.7 Plus
Nap1-PA 370 CG5330-PA 60..347 37..277 425 33.7 Plus
CG3708-PB 362 CG3708-PB 67..359 28..274 302 27.3 Plus