Clone Sequence Records
BO14762.5prime Sequence
669 bp (666 high quality bases) assembled on 2006-06-02
> BO14762.5prime
GAAGTTATCAGTCGACATGGAATTTTTACACGAATCCGTTGCACTGGGCG
TGGATCTGCTAATACTTGGCCTGTGTGCGCGCGAGTACGTGCACTACAAG
CGAACTGCCAAGGTGCTGAAGGCGGCACCACAATACAACATCGATGGAGA
CCTAAAATCGGTGGTGGAGCGGCAGCGCGACAAGAAGATACCATATGCGG
TAATCCGGGGCACAGTGACGCCCATCGGGGTGCCACTGAGGAGCTCCCTG
GTGCCCAGTGTGAGTGGAGTGCTGCAGATTGTGAAGCTGCATGAGCACAG
GGTAACGCGCGGATTCGCCGGCTTCTGGACGGAACAACACAAGTTGCTGC
ACGAATCCGCCAACGAGATGCCCTTCGAGTTGCGTAACCAGAGCCATGGT
GTGGAGATTGTGGACGCCTTGAGTGCCGCCGTCTTGGACGTGGACGTGGT
CTACGACAACTACGAGCCCTCCAATCTGTCCCTCTTCGACCATGTGTTTG
GTTTCTTCTCTGGCGTCCGTCAGAGGGGATTGCAAACGACGGAGGAGGTG
CTCAGAGAAGGCAGCTTCCTGACCGCTATTGGTGAACTGGAGTTGGATGG
CGATACTCTGCGCATGCAGCCCTCCAATGAGGGACCGCTCTTCCTGACCA
CTGCCACCAAGTCCACGCT
BO14762.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1134-PA | 1017 | CG1134-RA | 1..653 | 17..669 | 3265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:03:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mul1-RB | 1656 | CG1134-RB | 79..731 | 17..669 | 3265 | 100 | Plus |
Mul1-RA | 1213 | CG1134-RA | 79..731 | 17..669 | 3265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:03:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4021702..4022251 | 120..669 | 2750 | 100 | Plus |
3L | 28110227 | 3L | 4021535..4021640 | 17..122 | 530 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 09:03:18 has no hits.
BO14762.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:35:27 Download gff for
BO14762.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1134-PA | 1..653 | 17..669 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:16 Download gff for
BO14762.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1134-PA | 1..653 | 17..669 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:27:11 Download gff for
BO14762.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mul1-RA | 73..731 | 9..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:59:46 Download gff for
BO14762.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mul1-RA | 73..731 | 9..669 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:59:46 Download gff for
BO14762.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4021530..4021639 | 13..121 | 97 | -> | Plus |
3L | 4021704..4022251 | 122..669 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:27:11 Download gff for
BO14762.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4021530..4021639 | 13..121 | 97 | -> | Plus |
arm_3L | 4021704..4022251 | 122..669 | 100 | | Plus |
BO14762.complete Sequence
1048 bp (1048 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633240
> BO14762.complete
GAAGTTATCAGTCGACATGGAATTTTTACACGAATCCGTTGCACTGGGCG
TGGATCTGCTAATACTTGGCCTGTGTGCGCGCGAGTACGTGCACTACAAG
CGAACTGCCAAGGTGCTGAAGGCGGCACCACAATACAACATCGATGGAGA
CCTAAAATCGGTGGTGGAGCGGCAGCGCGACAAGAAGATACCATATGCGG
TAATCCGGGGCACAGTGACGCCCATCGGGGTGCCACTGAGGAGCTCCCTG
GTGCCCAGTGTGAGTGGAGTGCTGCAGATTGTGAAGCTGCATGAGCACAG
GGTAACGCGCGGATTCGCCGGCTTCTGGACGGAACAACACAAGTTGCTGC
ACGAATCCGCCAACGAGATGCCCTTCGAGTTGCGTAACCAGAGCCATGGT
GTGGAGATTGTGGACGCCTTGAGTGCCGCCGTCTTGGACGTGGACGTGGT
CTACGACAACTACGAGCCCTCCAATCTGTCCCTCTTCGACCATGTGTTTG
GTTTCTTCTCTGGCGTCCGTCAGAGGGGATTGCAAACGACGGAGGAGGTG
CTCAGAGAAGGCAGCTTCCTGACCGCTATTGGTGAACTGGAGTTGGATGG
CGATACTCTGCGCATGCAGCCCTCCAATGAGGGACCGCTCTTCCTGACCA
CTGCCACCAAGTCCACGCTTATTAAGCGGTTCGAAGATGCCAAGACAACG
ACGATACTCAAGCTGGTTGTGTGCAGCACCATCTCTGCCATCCTGGTTGC
CTTCATTGCCAAGAAACTCTACCGAAAACGAAAGCAGGAGCGGGAGGAGG
CCAAAATTCGCGAACGCCTGGATACGGAGCGTCGGGAGCGGAGGGCGAGG
AGTCGTCCTCACACTCTGTCCCAGGATCAACTCTGCGTGGTGTGCTCCAC
CAATCCCAAGGAGATTATCCTACTGCCATGTGGTCATGTGTGTCTCTGCG
AGGACTGTGCCCAGAAAATCTCCGTCACCTGCCCCGTGTGTCGTGGTAGC
ATCGTCTCCAAGGCAGCCGCCTTCATCGCCGCAAGCTTTCTAGACCAT
BO14762.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:52:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mul1-RB | 1017 | CG1134-PB | 1..1014 | 17..1030 | 5070 | 100 | Plus |
Mul1-RA | 1017 | CG1134-PA | 1..1014 | 17..1030 | 5070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:52:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mul1-RB | 1656 | CG1134-RB | 79..1092 | 17..1030 | 5070 | 100 | Plus |
Mul1-RA | 1213 | CG1134-RA | 79..1092 | 17..1030 | 5070 | 100 | Plus |
CG11594-RA | 2895 | CG11594-RA | 2658..2776 | 1030..912 | 595 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:52:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4021702..4022287 | 120..705 | 2930 | 100 | Plus |
3L | 28110227 | 3L | 4022346..4022553 | 706..913 | 1040 | 100 | Plus |
3L | 28110227 | 3L | 4022819..4022937 | 912..1030 | 595 | 100 | Plus |
3L | 28110227 | 3L | 4021535..4021640 | 17..122 | 530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:52:41 has no hits.
BO14762.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:42 Download gff for
BO14762.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1134-RA | 1..1017 | 17..1031 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:33 Download gff for
BO14762.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1134-RA | 91..1110 | 9..1030 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:27:23 Download gff for
BO14762.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mul1-RA | 79..1092 | 17..1032 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:42 Download gff for
BO14762.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1134-RA | 91..1110 | 9..1030 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:57:55 Download gff for
BO14762.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mul1-RA | 79..1092 | 17..1032 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:57:55 Download gff for
BO14762.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4021535..4021639 | 17..121 | 100 | -> | Plus |
3L | 4021704..4022287 | 122..705 | 100 | -> | Plus |
3L | 4022346..4022553 | 706..913 | 100 | -> | Plus |
3L | 4022821..4022937 | 914..1032 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:27:23 Download gff for
BO14762.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4021535..4021639 | 17..121 | 100 | -> | Plus |
arm_3L | 4021704..4022287 | 122..705 | 100 | -> | Plus |
arm_3L | 4022346..4022553 | 706..913 | 100 | -> | Plus |
arm_3L | 4022821..4022937 | 914..1032 | 98 | | Plus |
BO14762.pep Sequence
Translation from 16 to 1048
> BO14762.pep
MEFLHESVALGVDLLILGLCAREYVHYKRTAKVLKAAPQYNIDGDLKSVV
ERQRDKKIPYAVIRGTVTPIGVPLRSSLVPSVSGVLQIVKLHEHRVTRGF
AGFWTEQHKLLHESANEMPFELRNQSHGVEIVDALSAAVLDVDVVYDNYE
PSNLSLFDHVFGFFSGVRQRGLQTTEEVLREGSFLTAIGELELDGDTLRM
QPSNEGPLFLTTATKSTLIKRFEDAKTTTILKLVVCSTISAILVAFIAKK
LYRKRKQEREEAKIRERLDTERRERRARSRPHTLSQDQLCVVCSTNPKEI
ILLPCGHVCLCEDCAQKISVTCPVCRGSIVSKAAAFIAASFLDH
BO14762.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:46:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mul1-PB | 338 | CG1134-PB | 1..338 | 1..338 | 1723 | 100 | Plus |
Mul1-PA | 338 | CG1134-PA | 1..338 | 1..338 | 1723 | 100 | Plus |