Clone BO14763 Report

Search the DGRC for BO14763

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:147
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG10694-RA
Protein status:BO14763.pep: validated full length
Sequenced Size:904

Clone Sequence Records

BO14763.3prime Sequence

865 bp (687 high quality bases) assembled on 2006-06-02

> BO14763.3prime
ATGGTCTAGAAAGCTTGCGTCTCGATCCTCTTCTGACTGGCGTATTAGTA
CCTCTGCGGCCAGCTGCTCGTCCTTGTCGCAGGCCAGATAGGCCTGAACG
GCCATCACACGTTCGAAACCCAGTGCCTCCAAACGCCCTACGGCGGCGGT
TTCTTCGGCGGTTAAAGTAATCTGTAAATGTTCAATCTCGTTCGGGGTGC
GACTTGCGCCGCCTGAAATCATGTTCATTAACTCCTCCTGGTTACGCTGA
AAGACTTCGAAGGTAGCCGGATCGGTTTCAGCCAGTCTGTTCATTAGTCT
GTGTATTAGTTCTGGATTCTGATTAATCATCTCACGCATCCGTGTAATGT
TAAGATCTGCCATTAATTGCTGCAATTGATCACTTGTCTGTACGCTCGGG
ATTGCAGCTAATCCCTGCTCTGAAACAACCTCCTGAGGAATCCCATTAAT
CAAATACTCTATAGCCCTTTCCGGATGATTAAAGCTCGCCCGGAGGGCTG
AGCGTACCTCCTCTTCGCCATATCCCATTGACATGAGATCGCTCACCCAC
TGATCATTGGGAGCTAGTGAAGGCACCACATCCTCTGTGCGCAAAACATT
TGGGCCAGCGGCCAACGGTGGTGTCGGGGCAACCTTCTCCTCTGGCGAGC
TCTTATCAACCTTCTTCTTACCCATCAACACAATGATCTTGTCCTCGGCT
ATACGATATTCACTGAGGGGCATGGCATCCTCCATAATGCGGCCACTGTA
TATCAGCTGAAGGTTCTCCGCGGGCATGGCGACTTCNGGTAAATTGCCCA
ATTTCTGCTTCAGAACCCTCACCTCCTGCGATTCGTTCATCTCCAAAGTG
ATGGGTGCGTGGGTC

BO14763.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG10694-PA 873 CG10694-RA 35..870 854..19 4136 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:27:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG10694-RA 968 CG10694-RA 83..928 865..19 4169 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:27:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24107483..24108318 854..19 4154 99.8 Minus
Blast to na_te.dros performed on 2015-01-30 18:27:42 has no hits.

BO14763.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:35:28 Download gff for BO14763.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10694-PA 25..873 15..865 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:18 Download gff for BO14763.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10694-PA 25..873 15..865 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:58:24 Download gff for BO14763.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10694-RA 83..931 15..865 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:11:48 Download gff for BO14763.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10694-RA 83..931 15..865 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:11:48 Download gff for BO14763.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 24107473..24108317 20..865 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:58:24 Download gff for BO14763.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19933195..19934039 20..865 99 <- Minus

BO14763.5prime Sequence

749 bp (653 high quality bases) assembled on 2006-06-02

> BO14763.5prime
GAAGTTATCAGTCGACATGAAGCTGTCTATACGCATGCTGGACCAACGCA
CCATCACTTTGGAGATGAACGAATCGCAGGAGGTGAGGGCTCTGAAGCAG
AAATTGGGCAATTTACCCGAAGTCGCCATGCCCGCGGAGAACCTTCAGCT
GATATACAGTGGCCGCATTATGGAGGATGCCATGCCCCTCAGTGAATATC
GTATAGCCGAGGACAAGATCATTGTGTTGATGGGTAAGAAGAAGGTTGAT
AAGAGCTCGCCAGAGGAGAAGGTTGCCCCGACACCACCGTTGGCCGCTGG
CCCAAATGTTTTGCGCACAGAGGATGTGGTGCCTTCACTAGCTCCCAATG
ATCAGTGGGTGAGCGATCTCATGTCAATGGGATATGGCGAAGAGGAGGTA
CGCTCAGCCCTCCGGGCGAGCTTTAATCATCCGGAAAGGGCTATAGAGTA
TTTGATTAATGGGATTCCTCAGGAGGTTGTTTCAGAGCAGGGATTAGCTG
CAATCCCGAGCGTACAGACAAGTGATCAATTGCAGCAATTAATGGCAGAT
CTTAACATTACACGGATGCGTGAGATGATTAATCAGAATCCAGAACTAAT
ACACAGACTAATGAACAGACTGGCTGAAACCGATCCGGCTACCTTCGAAG
TCTTTTCGCGTAACCAGGAGGAGTTAATGAACATGATTTCAGGCGGCGCA
AGTCGCACCCCGAACGAGATTGAACATTTACAGATTACTTTAACCGCCG

BO14763.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG10694-PA 873 CG10694-RA 1..733 17..749 3615 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:06:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG10694-RA 968 CG10694-RA 59..791 17..749 3635 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:06:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24107449..24108181 17..749 3635 99.7 Plus
Blast to na_te.dros performed on 2015-02-11 13:06:45 has no hits.

BO14763.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:35:30 Download gff for BO14763.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10694-PA 1..733 17..749 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:20 Download gff for BO14763.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10694-PA 1..733 17..749 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:06:41 Download gff for BO14763.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10694-RA 59..791 17..749 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:37:11 Download gff for BO14763.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10694-RA 59..791 17..749 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:37:11 Download gff for BO14763.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 24107449..24108181 17..749 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:06:41 Download gff for BO14763.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19933171..19933903 17..749 99   Plus

BO14763.complete Sequence

904 bp (904 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633241

> BO14763.complete
GAAGTTATCAGTCGACATGAAGCTGTCTATACGCATGCTGGACCAACGCA
CCATCACTTTGGAGATGAACGAATCGCAGGAGGTGAGGGCTCTGAAGCAG
AAATTGGGCAATTTACCCGAAGTCGCCATGCCCGCGGAGAACCTTCAGCT
GATATACAGTGGCCGCATTATGGAGGATGCCATGCCCCTCAGTGAATATC
GTATAGCCGAGGACAAGATCATTGTGTTGATGGGTAAGAAGAAGGTTGAT
AAGAGCTCGCCAGAGGAGAAGGTTGCCCCGACACCACCGTTGGCCGCTGG
CCCAAATGTTTTGCGCACAGAGGATGTGGTGCCTTCACTAGCTCCCAATG
ATCAGTGGGTGAGCGATCTCATGTCAATGGGATATGGCGAAGAGGAGGTA
CGCTCAGCCCTCCGGGCGAGCTTTAATCATCCGGAAAGGGCTATAGAGTA
TTTGATTAATGGGATTCCTCAGGAGGTTGTTTCAGAGCAGGGATTAGCTG
CAATCCCGAGCGTACAGACAAGTGATCAATTGCAGCAATTAATGGCAGAT
CTTAACATTACACGGATGCGTGAGATGATTAATCAGAATCCAGAACTAAT
ACACAGACTAATGAACAGACTGGCTGAAACCGATCCGGCTACCTTCGAAG
TCTTTCAGCGTAACCAGGAGGAGTTAATGAACATGATTTCAGGCGGCGCA
AGTCGCACCCCGAACGAGATTGAACATTTACAGATTACTTTAACCGCCGA
AGAAACCGCCGCCGTAGGGCGTTTGGAGGCACTGGGTTTCGAACGTGTGA
TGGCCGTTCAGGCCTATCTGGCCTGCGACAAGGACGAGCAGCTGGCCGCA
GAGGTACTAATACGCCAGTCAGAAGAGGATCGAGACGCAAGCTTTCTAGA
CCAT

BO14763.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:49:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG10694-RA 873 CG10694-PA 1..870 17..886 4350 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:49:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG10694-RA 968 CG10694-RA 59..928 17..886 4350 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:49:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24107449..24108318 17..886 4350 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:49:30 has no hits.

BO14763.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:15 Download gff for BO14763.complete
Subject Subject Range Query Range Percent Splice Strand
CG10694-RA 1..873 17..890 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:34:36 Download gff for BO14763.complete
Subject Subject Range Query Range Percent Splice Strand
CG10694-RA 59..931 17..890 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:14:36 Download gff for BO14763.complete
Subject Subject Range Query Range Percent Splice Strand
CG10694-RA 59..928 17..888 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:15 Download gff for BO14763.complete
Subject Subject Range Query Range Percent Splice Strand
CG10694-RA 59..931 17..890 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:00 Download gff for BO14763.complete
Subject Subject Range Query Range Percent Splice Strand
CG10694-RA 59..928 17..888 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:00 Download gff for BO14763.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24107449..24108318 17..888 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:14:36 Download gff for BO14763.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19933171..19934040 17..888 99   Plus

BO14763.pep Sequence

Translation from 16 to 904

> BO14763.pep
MKLSIRMLDQRTITLEMNESQEVRALKQKLGNLPEVAMPAENLQLIYSGR
IMEDAMPLSEYRIAEDKIIVLMGKKKVDKSSPEEKVAPTPPLAAGPNVLR
TEDVVPSLAPNDQWVSDLMSMGYGEEEVRSALRASFNHPERAIEYLINGI
PQEVVSEQGLAAIPSVQTSDQLQQLMADLNITRMREMINQNPELIHRLMN
RLAETDPATFEVFQRNQEELMNMISGGASRTPNEIEHLQITLTAEETAAV
GRLEALGFERVMAVQAYLACDKDEQLAAEVLIRQSEEDRDASFLDH

BO14763.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG10694-PA 290 CG10694-PA 1..290 1..290 1444 100 Plus
Rad23-PC 414 CG1836-PC 1..414 1..288 293 24.9 Plus
Rad23-PA 414 CG1836-PA 1..414 1..288 293 24.9 Plus
Rad23-PB 343 CG1836-PB 89..343 112..288 248 27.8 Plus