Clone Sequence Records
BO14778.3prime Sequence
662 bp (662 high quality bases) assembled on 2006-06-16
> BO14778.3prime
ATGGTCTAGAAAGCTTGCGCAATCAGTGGTGGTGGCCAGCAGCTTTAGAT
GATTCTCCGGCAGCTGCACTTCATCAGGATTTTGTGACTCCTCTGGCTCT
GGAGCAGGCTGCTCAATCTTCTCCAGATCGTGATCCTGCTTCTGTTTCTC
CTCCCGCTGGCACAGGACCGCCTTCATCCGGATGTCCTTGACATCCTTCG
ACACCCTCTCTGCTTTAGTTGTCTCCGTGGCCTCGAAGGCGTTTATCCAG
AGCATGGCTGCCAGCGTGGTCATCAGACCACCCATGATGGCCCACTCCCA
GCGCTGGTAGACTTCGGTGGAGACGCCCAGATAGCGGCGCAGCACGAACT
GGGTGGACAGGTGGAGGATGTGCTCCACGCTGCACCAGAGCCACAGGGCC
AGGACCTCCATGAAGGCCACGCCCAACACCAGTTCGATCAGGAAGGTGGT
CAGCCAGCCCATCCGGCTACGATAGCGCGTGGGCAGGATCTCCAGGTCGT
GCAGGAAGTATAGGATGGCGCAGTAGGCAATGTGGCCGGCGTAGATGGTG
CCGGGAATTACCGGGAAACGCTCTATGTCCAGCAGACAACTGCCACGCAT
TCGGAAGTGCAGAACGCTGGCAATCAGGAGTACCAATGTGCAGGTCATGT
CGACTGATAACT
BO14778.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9570-PA | 633 | CG9570-RA | 1..630 | 648..19 | 3150 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:15:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9570-RA | 1226 | CG9570-RA | 163..792 | 648..19 | 3150 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:15:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20051456..20052085 | 648..19 | 3150 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:15:55 has no hits.
BO14778.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:35:42 Download gff for
BO14778.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-PA | 1..633 | 15..648 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:35 Download gff for
BO14778.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-PA | 1..633 | 15..648 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:37:16 Download gff for
BO14778.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 154..795 | 15..658 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:01:05 Download gff for
BO14778.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 154..795 | 15..658 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:01:05 Download gff for
BO14778.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20051447..20052088 | 15..658 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:37:16 Download gff for
BO14778.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19945480..19946121 | 15..658 | 99 | | Minus |
BO14778.5prime Sequence
662 bp (662 high quality bases) assembled on 2006-06-16
> BO14778.5prime
GAAGTTATCAGTCGACATGACCTGCACATTGGTACTCCTGATTGCCAGCG
TTCTGCACTTCCGAATGCGTGGCAGTTGTCTGCTGGACATAGAGCGTTTC
CCGGTAATTCCCGGCACCATCTACGCCGGCCACATTGCCTACTGCGCCAT
CCTATACTTCCTGCACGACCTGGAGATCCTGCCCACGCGCTATCGTAGCC
GGATGGGCTGGCTGACCACCTTCCTGATCGAACTGGTGTTGGGCGTGGCC
TTCATGGAGGTCCTGGCCCTGTGGCTCTGGTGCAGCGTGGAGCACATCCT
CCACCTGTCCACCCAGTTCGTGCTGCGCCGCTATCTGGGCGTCTCCACCG
AAGTCTACCAGCGCTGGGAGTGGGCCATCATGGGTGGTCTGATGACCACG
CTGGCAGCCATGCTCTGGATAAACGCCTTCGAGGCCACGGAGACAACTAA
AGCAGAGAGGGTGTCGAAGGATGTCAAGGACATCCGGATGAAGGCGGTCC
TGTGCCAGCGGGAGGAGAAACAGAAGCAGGATCACGATCTGGAGAAGATT
GAGCAGCCTGCTCCAGAGCCAGAGGAGTCACAAAATCCTGATGAAGTGCA
GCTGCCGGAGAATCATCTAAAGCTGCTGGCCACCACCACTGATTGCGCAA
GCTTTCTAGACC
BO14778.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9570-PA | 633 | CG9570-RA | 1..630 | 17..646 | 3150 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:28:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9570-RA | 1226 | CG9570-RA | 163..792 | 17..646 | 3150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:28:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20051456..20052085 | 17..646 | 3150 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:28:50 has no hits.
BO14778.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:35:43 Download gff for
BO14778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-PA | 1..633 | 17..650 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:36 Download gff for
BO14778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-PA | 1..633 | 17..650 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:08:38 Download gff for
BO14778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 154..795 | 7..650 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:45:43 Download gff for
BO14778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 154..795 | 7..650 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:45:43 Download gff for
BO14778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20051447..20052088 | 7..650 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:08:38 Download gff for
BO14778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19945480..19946121 | 7..650 | 99 | | Plus |
BO14778.complete Sequence
664 bp (664 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633242
> BO14778.complete
GAAGTTATCAGTCGACATGACCTGCACATTGGTACTCCTGATTGCCAGCG
TTCTGCACTTCCGAATGCGTGGCAGTTGTCTGCTGGACATAGAGCGTTTC
CCGGTAATTCCCGGCACCATCTACGCCGGCCACATTGCCTACTGCGCCAT
CCTATACTTCCTGCACGACCTGGAGATCCTGCCCACGCGCTATCGTAGCC
GGATGGGCTGGCTGACCACCTTCCTGATCGAACTGGTGTTGGGCGTGGCC
TTCATGGAGGTCCTGGCCCTGTGGCTCTGGTGCAGCGTGGAGCACATCCT
CCACCTGTCCACCCAGTTCGTGCTGCGCCGCTATCTGGGCGTCTCCACCG
AAGTCTACCAGCGCTGGGAGTGGGCCATCATGGGTGGTCTGATGACCACG
CTGGCAGCCATGCTCTGGATAAACGCCTTCGAGGCCACGGAGACAACTAA
AGCAGAGAGGGTGTCGAAGGATGTCAAGGACATCCGGATGAAGGCGGTCC
TGTGCCAGCGGGAGGAGAAACAGAAGCAGGATCACGATCTGGAGAAGATT
GAGCAGCCTGCTCCAGAGCCAGAGGAGTCACAAAATCCTGATGAAGTGCA
GCTGCCGGAGAATCATCTAAAGCTGCTGGCCACCACCACTGATTGCGCAA
GCTTTCTAGACCAT
BO14778.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:05:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9570-RA | 633 | CG9570-PA | 1..630 | 17..646 | 3150 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:05:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9570-RA | 1226 | CG9570-RA | 163..792 | 17..646 | 3150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:05:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20051456..20052085 | 17..646 | 3150 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:05:03 has no hits.
BO14778.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:11:50 Download gff for
BO14778.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 1..633 | 17..650 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:30:09 Download gff for
BO14778.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 154..795 | 7..650 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:45:11 Download gff for
BO14778.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 163..792 | 17..648 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:11:51 Download gff for
BO14778.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 154..795 | 7..650 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:14:10 Download gff for
BO14778.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 163..792 | 17..648 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:14:10 Download gff for
BO14778.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20051456..20052085 | 17..648 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:45:11 Download gff for
BO14778.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19945489..19946118 | 17..648 | 99 | | Plus |
BO14778.pep Sequence
Translation from 16 to 664
> BO14778.pep
MTCTLVLLIASVLHFRMRGSCLLDIERFPVIPGTIYAGHIAYCAILYFLH
DLEILPTRYRSRMGWLTTFLIELVLGVAFMEVLALWLWCSVEHILHLSTQ
FVLRRYLGVSTEVYQRWEWAIMGGLMTTLAAMLWINAFEATETTKAERVS
KDVKDIRMKAVLCQREEKQKQDHDLEKIEQPAPEPEESQNPDEVQLPENH
LKLLATTTDCASFLDH
BO14778.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:35:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9570-PA | 210 | CG9570-PA | 1..210 | 1..210 | 1105 | 100 | Plus |
