Clone BO14783 Report

Search the DGRC for BO14783

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:147
Well:83
Vector:pDNR-Dual
Associated Gene/TranscriptCG13494-RA
Protein status:BO14783.pep: validated full length
Sequenced Size:394

Clone Sequence Records

BO14783.5prime Sequence

392 bp (392 high quality bases) assembled on 2006-06-02

> BO14783.5prime
GAAGTTATCAGTCGACATGGATGACACATTATCAACGGTAGAAGGCGGGA
TGACGGAAACATCCTCATGGAGCACCACGATCGCCACCACCACCACTACA
GAGGCCGCCAAGGCGGGTAGCATGGCTGTCGGTATTATTGTCCTGATCGT
TGTTATGGTGCTCCTCTGCTGCCTGCTCATCATCTGCCTGCCGCTCCTCT
GCCTGTGCGGCTGTTGCGGACTCGCCTGCTCCGCGTGCCTCGCTTGCGAC
GAAGGATGTTGTGGTGAAGGCGGCGGCGGTGGATGTTGCGGCGATGACGG
CGGTGGATGTTGCGGCGATGGCGGCGGGTGTGGCGATTGTGGCGACGGCT
GTGGGGACTGCACCTTGGACGATGATGCAAGCTTTCTAGACC

BO14783.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG13494-PA 363 CG13494-RA 1..360 17..376 1800 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:30:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG13494-RA 604 CG13494-RA 73..433 16..376 1805 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:30:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21954413..21954773 376..16 1805 100 Minus
Blast to na_te.dros performed on 2015-02-12 11:30:35 has no hits.

BO14783.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:35:49 Download gff for BO14783.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13494-PA 1..363 17..380 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:46 Download gff for BO14783.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13494-PA 1..363 17..380 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:08:40 Download gff for BO14783.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13494-RA 73..438 16..384 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:49:59 Download gff for BO14783.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13494-RA 73..438 16..384 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:49:59 Download gff for BO14783.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21954408..21954773 16..384 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:08:40 Download gff for BO14783.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17841913..17842278 16..384 98   Minus

BO14783.3prime Sequence

392 bp (392 high quality bases) assembled on 2006-06-16

> BO14783.3prime
ATGGTCTAGAAAGCTTGCATCATCGTCCAAGGTGCAGTCCCCACAGCCGT
CGCCACAATCGCCACACCCGCCGCCATCGCCGCAACATCCACCGCCGTCA
TCGCCGCAACATCCACCGCCGCCGCCTTCACCACAACATCCTTCGTCGCA
AGCGAGGCACGCGGAGCAGGCGAGTCCGCAACAGCCGCACAGGCAGAGGA
GCGGCAGGCAGATGATGAGCAGGCAGCAGAGGAGCACCATAACAACGATC
AGGACAATAATACCGACAGCCATGCTACCCGCCTTGGCGGCCTCTGTAGT
GGTGGTGGTGGCGATCGTGGTGCTCCATGAGGATGTTTCCGTCATCCCGC
CTTCTACCGTTGATAATGTGTCATCCATGTCGACTGATAACT

BO14783.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG13494-PA 363 CG13494-RA 1..360 378..19 1800 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:24:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG13494-RA 604 CG13494-RA 73..433 379..19 1805 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:24:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21954413..21954773 19..379 1805 100 Plus
Blast to na_te.dros performed on 2015-02-10 15:24:27 has no hits.

BO14783.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:35:48 Download gff for BO14783.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13494-PA 1..363 15..378 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:44 Download gff for BO14783.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13494-PA 1..363 15..378 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 22:55:28 Download gff for BO14783.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13494-RA 73..438 11..379 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:25:23 Download gff for BO14783.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13494-RA 73..438 11..379 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:25:23 Download gff for BO14783.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 21954408..21954773 11..379 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 22:55:28 Download gff for BO14783.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17841913..17842278 11..379 98   Plus

BO14783.complete Sequence

394 bp (394 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633243

> BO14783.complete
GAAGTTATCAGTCGACATGGATGACACATTATCAACGGTAGAAGGCGGGA
TGACGGAAACATCCTCATGGAGCACCACGATCGCCACCACCACCACTACA
GAGGCCGCCAAGGCGGGTAGCATGGCTGTCGGTATTATTGTCCTGATCGT
TGTTATGGTGCTCCTCTGCTGCCTGCTCATCATCTGCCTGCCGCTCCTCT
GCCTGTGCGGCTGTTGCGGACTCGCCTGCTCCGCGTGCCTCGCTTGCGAC
GAAGGATGTTGTGGTGAAGGCGGCGGCGGTGGATGTTGCGGCGATGACGG
CGGTGGATGTTGCGGCGATGGCGGCGGGTGTGGCGATTGTGGCGACGGCT
GTGGGGACTGCACCTTGGACGATGATGCAAGCTTTCTAGACCAT

BO14783.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:43:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG13494-RA 363 CG13494-PA 1..360 17..376 1800 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:43:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG13494-RA 604 CG13494-RA 73..433 16..376 1805 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:43:48
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21954413..21954773 376..16 1805 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:43:50 has no hits.

BO14783.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:57:17 Download gff for BO14783.complete
Subject Subject Range Query Range Percent Splice Strand
CG13494-RA 1..363 17..380 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:29:54 Download gff for BO14783.complete
Subject Subject Range Query Range Percent Splice Strand
CG13494-RA 73..438 16..384 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:58:26 Download gff for BO14783.complete
Subject Subject Range Query Range Percent Splice Strand
CG13494-RA 74..433 17..378 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:57:17 Download gff for BO14783.complete
Subject Subject Range Query Range Percent Splice Strand
CG13494-RA 73..438 16..384 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:25:39 Download gff for BO14783.complete
Subject Subject Range Query Range Percent Splice Strand
CG13494-RA 74..433 17..378 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:25:39 Download gff for BO14783.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21954411..21954772 17..378 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:58:26 Download gff for BO14783.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17841916..17842277 17..378 99   Minus

BO14783.pep Sequence

Translation from 16 to 394

> BO14783.pep
MDDTLSTVEGGMTETSSWSTTIATTTTTEAAKAGSMAVGIIVLIVVMVLL
CCLLIICLPLLCLCGCCGLACSACLACDEGCCGEGGGGGCCGDDGGGCCG
DGGGCGDCGDGCGDCTLDDDASFLDH

BO14783.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:20:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG13494-PA 120 CG13494-PA 1..120 1..120 686 100 Plus