Clone Sequence Records
BO14783.5prime Sequence
392 bp (392 high quality bases) assembled on 2006-06-02
> BO14783.5prime
GAAGTTATCAGTCGACATGGATGACACATTATCAACGGTAGAAGGCGGGA
TGACGGAAACATCCTCATGGAGCACCACGATCGCCACCACCACCACTACA
GAGGCCGCCAAGGCGGGTAGCATGGCTGTCGGTATTATTGTCCTGATCGT
TGTTATGGTGCTCCTCTGCTGCCTGCTCATCATCTGCCTGCCGCTCCTCT
GCCTGTGCGGCTGTTGCGGACTCGCCTGCTCCGCGTGCCTCGCTTGCGAC
GAAGGATGTTGTGGTGAAGGCGGCGGCGGTGGATGTTGCGGCGATGACGG
CGGTGGATGTTGCGGCGATGGCGGCGGGTGTGGCGATTGTGGCGACGGCT
GTGGGGACTGCACCTTGGACGATGATGCAAGCTTTCTAGACC
BO14783.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13494-PA | 363 | CG13494-RA | 1..360 | 17..376 | 1800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:30:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13494-RA | 604 | CG13494-RA | 73..433 | 16..376 | 1805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:30:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21954413..21954773 | 376..16 | 1805 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:30:35 has no hits.
BO14783.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:35:49 Download gff for
BO14783.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-PA | 1..363 | 17..380 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:46 Download gff for
BO14783.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-PA | 1..363 | 17..380 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:08:40 Download gff for
BO14783.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 73..438 | 16..384 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:49:59 Download gff for
BO14783.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 73..438 | 16..384 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:49:59 Download gff for
BO14783.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21954408..21954773 | 16..384 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:08:40 Download gff for
BO14783.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17841913..17842278 | 16..384 | 98 | | Minus |
BO14783.3prime Sequence
392 bp (392 high quality bases) assembled on 2006-06-16
> BO14783.3prime
ATGGTCTAGAAAGCTTGCATCATCGTCCAAGGTGCAGTCCCCACAGCCGT
CGCCACAATCGCCACACCCGCCGCCATCGCCGCAACATCCACCGCCGTCA
TCGCCGCAACATCCACCGCCGCCGCCTTCACCACAACATCCTTCGTCGCA
AGCGAGGCACGCGGAGCAGGCGAGTCCGCAACAGCCGCACAGGCAGAGGA
GCGGCAGGCAGATGATGAGCAGGCAGCAGAGGAGCACCATAACAACGATC
AGGACAATAATACCGACAGCCATGCTACCCGCCTTGGCGGCCTCTGTAGT
GGTGGTGGTGGCGATCGTGGTGCTCCATGAGGATGTTTCCGTCATCCCGC
CTTCTACCGTTGATAATGTGTCATCCATGTCGACTGATAACT
BO14783.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13494-PA | 363 | CG13494-RA | 1..360 | 378..19 | 1800 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:24:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13494-RA | 604 | CG13494-RA | 73..433 | 379..19 | 1805 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:24:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21954413..21954773 | 19..379 | 1805 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 15:24:27 has no hits.
BO14783.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:35:48 Download gff for
BO14783.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-PA | 1..363 | 15..378 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:44 Download gff for
BO14783.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-PA | 1..363 | 15..378 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 22:55:28 Download gff for
BO14783.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 73..438 | 11..379 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:25:23 Download gff for
BO14783.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 73..438 | 11..379 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:25:23 Download gff for
BO14783.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21954408..21954773 | 11..379 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 22:55:28 Download gff for
BO14783.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17841913..17842278 | 11..379 | 98 | | Plus |
BO14783.complete Sequence
394 bp (394 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633243
> BO14783.complete
GAAGTTATCAGTCGACATGGATGACACATTATCAACGGTAGAAGGCGGGA
TGACGGAAACATCCTCATGGAGCACCACGATCGCCACCACCACCACTACA
GAGGCCGCCAAGGCGGGTAGCATGGCTGTCGGTATTATTGTCCTGATCGT
TGTTATGGTGCTCCTCTGCTGCCTGCTCATCATCTGCCTGCCGCTCCTCT
GCCTGTGCGGCTGTTGCGGACTCGCCTGCTCCGCGTGCCTCGCTTGCGAC
GAAGGATGTTGTGGTGAAGGCGGCGGCGGTGGATGTTGCGGCGATGACGG
CGGTGGATGTTGCGGCGATGGCGGCGGGTGTGGCGATTGTGGCGACGGCT
GTGGGGACTGCACCTTGGACGATGATGCAAGCTTTCTAGACCAT
BO14783.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:43:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13494-RA | 363 | CG13494-PA | 1..360 | 17..376 | 1800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:43:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13494-RA | 604 | CG13494-RA | 73..433 | 16..376 | 1805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:43:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21954413..21954773 | 376..16 | 1805 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:43:50 has no hits.
BO14783.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:57:17 Download gff for
BO14783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 1..363 | 17..380 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:29:54 Download gff for
BO14783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 73..438 | 16..384 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:58:26 Download gff for
BO14783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 74..433 | 17..378 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:57:17 Download gff for
BO14783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 73..438 | 16..384 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:25:39 Download gff for
BO14783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 74..433 | 17..378 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:25:39 Download gff for
BO14783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21954411..21954772 | 17..378 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:58:26 Download gff for
BO14783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17841916..17842277 | 17..378 | 99 | | Minus |
BO14783.pep Sequence
Translation from 16 to 394
> BO14783.pep
MDDTLSTVEGGMTETSSWSTTIATTTTTEAAKAGSMAVGIIVLIVVMVLL
CCLLIICLPLLCLCGCCGLACSACLACDEGCCGEGGGGGCCGDDGGGCCG
DGGGCGDCGDGCGDCTLDDDASFLDH
BO14783.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:20:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13494-PA | 120 | CG13494-PA | 1..120 | 1..120 | 686 | 100 | Plus |