Clone Sequence Records
BO14785.3prime Sequence
596 bp (595 high quality bases) assembled on 2006-06-02
> BO14785.3prime
ATGGTCTAGAAAGCTTGCCCACTTAATGTAGGTGAACTTGAAGGTTTTCG
GTTCCGTCGCCTCGCAGACGTACAGCATCTGGATCTTGCAGTTGGCATCG
TTGATCATCTCCCGGGTGGCGAACATGTGGACGCAGTTCTCGTTGCCGCC
GTAGTTATCCGGCATTTGCTTGGGCCCGTTCCAAGGGGCGTAGGTCATCG
GGCGGCCGTTGGACATCCAATAGAAGGCGCCCTCGGTGCCCAGGTCATTG
CCCGATATCCAAAAGTAATCATTGTTCTTGAACCCCTTGGCCTTCATGTA
TTTGATCAGCGCCTCCATTTCCGGCTTATCCTCGATGGAGGCCAAGTGGG
CGTTCATCATGCGACAGGCGCCGGCCGCCTGAAACCAATTCACCTTATTC
ATGGGCTCGATGTAGTAATAGTTGTCCCCGATCCGCACGAACGGTGTGGT
ATCAATCTCCGATGGAATGCCATTATAGACCTCGGTGCGGTAGTTGGTGA
ATATGTTCACATCGGGCAGATAGGCCAGTGACGGTATCCCGACGCTCGTC
AGGATTAGCAGCAGAGTCTCGGTGCGGTACATGTCGACTGATAACT
BO14785.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12111-PA | 567 | CG12111-RA | 1..564 | 582..19 | 2820 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:22:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12111-RB | 675 | CG12111-RB | 27..590 | 582..19 | 2820 | 100 | Minus |
CG12111-RA | 631 | CG12111-RA | 27..590 | 582..19 | 2820 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:22:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8570293..8570745 | 19..471 | 2265 | 100 | Plus |
X | 23542271 | X | 8570810..8570922 | 470..582 | 565 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:22:01 has no hits.
BO14785.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:35:50 Download gff for
BO14785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12111-PA | 1..567 | 18..582 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:47 Download gff for
BO14785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12111-PA | 1..567 | 18..582 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:47:22 Download gff for
BO14785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12111-RA | 22..598 | 9..590 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:41:10 Download gff for
BO14785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12111-RA | 22..598 | 9..590 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:41:10 Download gff for
BO14785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8570285..8570744 | 9..470 | 99 | <- | Plus |
X | 8570811..8570927 | 471..590 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:47:22 Download gff for
BO14785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8464318..8464777 | 9..470 | 99 | <- | Plus |
arm_X | 8464844..8464960 | 471..590 | 96 | | Plus |
BO14785.5prime Sequence
596 bp (595 high quality bases) assembled on 2006-05-29
> BO14785.5prime
GAAGTTATCAGTCGACATGTACCGCACCGAGACTCTGCTGCTAATCCTGA
CGAGCGTCGGGATACCGTCACTGGCCTATCTGCCCGATGTGAACATATTC
ACCAACTACCGCACCGAGGTCTATAATGGCATTCCATCGGAGATTGATAC
CACACCGTTCGTGCGGATCGGGGACAACTATTACTACATCGAGCCCATGA
ATAAGGTGAATTGGTTTCAGGCGGCCGGCGCCTGTCGCATGATGAACGCC
CACTTGGCCTCCATCGAGGATAAGCCGGAAATGGAGGCGCTGATCAAATA
CATGAAGGCCAAGGGGTTCAAGAACAATGATTACTTTTGGATATCGGGCA
ATGACCTGGGCACCGAGGGCGCCTTCTATTGGATGTCCAACGGCCGCCCG
ATGACCTACGCCCCTTGGAACGGGCCCAAGCAAATGCCGGATAACTACGG
CGGCAACGAGAACTGCGTCCACATGTTCGCCACCCGGGAGATGATCAACG
ATGCCAACTGCAAGATCCAGATGCTGTACGTCTGCGAGGCGACGGAACCG
AAAACCTTCAAGTTCACCTACATTAAGTGGGCAAGCTTTCTAGACC
BO14785.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12111-PA | 567 | CG12111-RA | 1..564 | 17..580 | 2820 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:57:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12111-RB | 675 | CG12111-RB | 27..590 | 17..580 | 2820 | 100 | Plus |
CG12111-RA | 631 | CG12111-RA | 27..590 | 17..580 | 2820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:57:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8570293..8570745 | 580..128 | 2265 | 100 | Minus |
X | 23542271 | X | 8570810..8570922 | 129..17 | 565 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:57:23 has no hits.
BO14785.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:35:51 Download gff for
BO14785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12111-PA | 1..567 | 17..581 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:48 Download gff for
BO14785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12111-PA | 1..567 | 17..581 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:52:27 Download gff for
BO14785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12111-RA | 22..598 | 9..590 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:52:30 Download gff for
BO14785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12111-RA | 22..598 | 9..590 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:52:30 Download gff for
BO14785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8570285..8570744 | 129..590 | 99 | <- | Minus |
X | 8570811..8570927 | 9..128 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:52:27 Download gff for
BO14785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8464318..8464777 | 129..590 | 99 | <- | Minus |
arm_X | 8464844..8464960 | 9..128 | 96 | | Minus |
BO14785.complete Sequence
598 bp (598 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633244
> BO14785.complete
GAAGTTATCAGTCGACATGTACCGCACCGAGACTCTGCTGCTAATCCTGA
CGAGCGTCGGGATACCGTCACTGGCCTATCTGCCCGATGTGAACATATTC
ACCAACTACCGCACCGAGGTCTATAATGGCATTCCATCGGAGATTGATAC
CACACCGTTCGTGCGGATCGGGGACAACTATTACTACATCGAGCCCATGA
ATAAGGTGAATTGGTTTCAGGCGGCCGGCGCCTGTCGCATGATGAACGCC
CACTTGGCCTCCATCGAGGATAAGCCGGAAATGGAGGCGCTGATCAAATA
CATGAAGGCCAAGGGGTTCAAGAACAATGATTACTTTTGGATATCGGGCA
ATGACCTGGGCACCGAGGGCGCCTTCTATTGGATGTCCAACGGCCGCCCG
ATGACCTACGCCCCTTGGAACGGGCCCAAGCAAATGCCGGATAACTACGG
CGGCAACGAGAACTGCGTCCACATGTTCGCCACCCGGGAGATGATCAACG
ATGCCAACTGCAAGATCCAGATGCTGTACGTCTGCGAGGCGACGGAACCG
AAAACCTTCAAGTTCACCTACATTAAGTGGGCAAGCTTTCTAGACCAT
BO14785.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:47:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12111-RB | 567 | CG12111-PB | 1..564 | 17..580 | 2820 | 100 | Plus |
CG12111-RA | 567 | CG12111-PA | 1..564 | 17..580 | 2820 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:47:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12111-RB | 675 | CG12111-RB | 27..590 | 17..580 | 2820 | 100 | Plus |
CG12111-RA | 631 | CG12111-RA | 27..590 | 17..580 | 2820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:47:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8570293..8570745 | 580..128 | 2265 | 100 | Minus |
X | 23542271 | X | 8570810..8570922 | 129..17 | 565 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:47:45 has no hits.
BO14785.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:07:17 Download gff for
BO14785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12111-RA | 1..567 | 17..581 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:23:22 Download gff for
BO14785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12111-RA | 9..585 | 9..590 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:22:57 Download gff for
BO14785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12111-RA | 27..590 | 17..582 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:07:17 Download gff for
BO14785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12111-RA | 9..585 | 9..590 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:17:04 Download gff for
BO14785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12111-RA | 27..590 | 17..582 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:17:04 Download gff for
BO14785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8570291..8570744 | 129..582 | 99 | <- | Minus |
X | 8570811..8570922 | 17..128 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:22:57 Download gff for
BO14785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8464324..8464777 | 129..582 | 99 | <- | Minus |
arm_X | 8464844..8464955 | 17..128 | 100 | | Minus |
BO14785.pep Sequence
Translation from 16 to 598
> BO14785.pep
MYRTETLLLILTSVGIPSLAYLPDVNIFTNYRTEVYNGIPSEIDTTPFVR
IGDNYYYIEPMNKVNWFQAAGACRMMNAHLASIEDKPEMEALIKYMKAKG
FKNNDYFWISGNDLGTEGAFYWMSNGRPMTYAPWNGPKQMPDNYGGNENC
VHMFATREMINDANCKIQMLYVCEATEPKTFKFTYIKWASFLDH
BO14785.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:53:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12111-PB | 188 | CG12111-PB | 1..188 | 1..188 | 1039 | 100 | Plus |
CG12111-PA | 188 | CG12111-PA | 1..188 | 1..188 | 1039 | 100 | Plus |
lectin-37Da-PB | 186 | CG33532-PB | 21..179 | 28..180 | 272 | 36 | Plus |
lectin-37Da-PA | 186 | CG33532-PA | 21..179 | 28..180 | 272 | 36 | Plus |
CG43055-PA | 180 | CG43055-PA | 10..177 | 20..183 | 257 | 34.3 | Plus |