Clone BO14791 Report

Search the DGRC for BO14791

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:147
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptMtl-RA
Protein status:BO14791.pep: Imported from assembly
Sequenced Size:620

Clone Sequence Records

BO14791.3prime Sequence

618 bp (618 high quality bases) assembled on 2006-06-16

> BO14791.3prime
ATGGTCTAGAAAGCTTGCCATTATTAAACACTTTCGCTGGCGTCGCTTTA
GCGGCTCTGGTCTGAGCACCGCGCGCACCGCTTCCTCGAACACCGGCTTG
AGACCGCGCTGCGTCAAGGCGGAGCACTCCATGTATTTCACAGCGCGTAT
CTTGTTTGCCAGCTTCTGGCCCTGCTCGCGCTTCAGCGGCGTCAGTCCCT
GCTCTGCCAGGCCGCTGAGTGTCTCTCGATCTTCGCGCAAATCGATTTTG
GTGCCAACTAGAATGATGGGCGCATCGGGACAGTGGTGCTTTATCTCCGG
ATACCATTTTGAGGTGACGTTCTCAAAGGACGAGGGACTCGCCACGCTGT
AGCATATCAGGAAAACGTCTGTCTGCGGGTAGGATAGCGGTCTCAGGCGG
TCGTAGTCCTCCTGACCCGCCGTATCCCACAGTCCCAGCGAGACCTGTAT
TGTGTCCACTTGCATGGGCGCCGAGTAGTTGTCGAAGACTGTGGGCACAT
ATTCGCCGGGAAAGCAGTCTGTCGTGTAAGAGATTAGCATGCAGGTCTTT
CCGACGGTGCCGTCACCAACGACTACACACTTTATGGGCCTTCCGGTTGA
CATTGTCGACTGATAACT

BO14791.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG5588-PB 588 Mtl-RB 1..585 603..19 2875 99.6 Minus
CG5588-PA 588 Mtl-RA 1..585 603..19 2875 99.6 Minus
CG5588-PC 588 Mtl-RC 1..585 603..19 2875 99.6 Minus
CG8556-PA 579 Rac2-RA 166..221 429..374 155 91 Minus
CG2248-PA 579 Rac1-RA 157..203 438..392 135 91.4 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:01:36
Subject Length Description Subject Range Query Range Score Percent Strand
Mtl-RC 1197 CG5588-RC 215..799 603..19 2895 99.7 Minus
Mtl-RA 2002 CG5588-RA 244..828 603..19 2895 99.7 Minus
Mtl-RB 2097 CG5588-RB 339..923 603..19 2895 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:01:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27638073..27638306 487..254 1155 99.6 Minus
3R 32079331 3R 27638378..27638541 255..92 820 100 Minus
3R 32079331 3R 27637888..27638003 603..488 565 99.1 Minus
3L 28110227 3L 1301985..1302334 233..582 400 74.3 Plus
3R 32079331 3R 27638622..27638697 94..19 380 100 Minus
3L 28110227 3L 7434290..7434503 374..587 275 75.2 Plus
X 23542271 X 19698114..19698237 438..315 200 77.4 Minus
Blast to na_te.dros performed on 2015-02-11 18:01:33 has no hits.

BO14791.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:35:58 Download gff for BO14791.3prime
Subject Subject Range Query Range Percent Splice Strand
Mtl-PB 1..588 15..603 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:55 Download gff for BO14791.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5588-PC 1..588 15..603 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:28:16 Download gff for BO14791.3prime
Subject Subject Range Query Range Percent Splice Strand
Mtl-RB 331..926 15..612 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:36:33 Download gff for BO14791.3prime
Subject Subject Range Query Range Percent Splice Strand
Mtl-RB 331..926 15..612 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:36:33 Download gff for BO14791.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 27637880..27638003 488..612 96 -> Minus
3R 27638073..27638305 255..487 99 -> Minus
3R 27638379..27638539 94..254 100 -> Minus
3R 27638623..27638700 15..93 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:28:16 Download gff for BO14791.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 23463602..23463725 488..612 96 -> Minus
arm_3R 23463795..23464027 255..487 99 -> Minus
arm_3R 23464101..23464261 94..254 100 -> Minus
arm_3R 23464345..23464422 15..93 97   Minus

BO14791.5prime Sequence

618 bp (618 high quality bases) assembled on 2006-06-16

> BO14791.5prime
GAAGTTATCAGTCGACAATGTCAACCGGAAGGCCCATAAAGTGTGTAGTC
GTTGGTGACGGCACCGTCGGAAAGACCTGCATGCTAATCTCCTACACGAC
AGACTGCTTTCCCGGCGAATATGTGCCCACAGTCTTCGACAACTACTCGG
CGCCCATGCAAGTGGACACAATACAGGTCTCGCTGGGACTGTGGGATACG
GCGGGTCAGGAGGACTACGACCGCCTGAGACCGCTATCCTACCCGCAGAC
AGACGTTTTCCTGATATGCTACAGCGTGGCGAGTCCCTCGTCCTTTGAGA
ACGTCACCTCAAAATGGTATCCGGAGATAAAGCACCACTGTCCCGATGCG
CCCATCATTCTAGTTGGCACCAAAATCGATTTGCGCGAAGATCGAGAGAC
ACTCAGCGGCCTGGCAGAGCAGGGACTGACGCCGCTGAAGCGCGAGCAGG
GCCAGAAGCTGGCAAACAAGATACGCGCTGTGAAATACATGGAGTGCTCC
GCCTTGACGCAGCGCGGTCTCAAGCCGGTGTTCGAGGAAGCGGTGCGCGC
GGTGCTCAGACCAGAGCCGCTAAAGCGACGCCAGCGAAAGTGTTTAATAA
TGGCAAGCTTTCTAGACC

BO14791.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG5588-PB 588 Mtl-RB 1..585 18..602 2900 99.8 Plus
CG5588-PA 588 Mtl-RA 1..585 18..602 2900 99.8 Plus
CG5588-PC 588 Mtl-RC 1..585 18..602 2900 99.8 Plus
CG8556-PA 579 Rac2-RA 166..221 192..247 155 91 Plus
CG2248-PA 579 Rac1-RA 157..203 183..229 135 91.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:34:21
Subject Length Description Subject Range Query Range Score Percent Strand
Mtl-RC 1197 CG5588-RC 215..799 18..602 2910 99.8 Plus
Mtl-RA 2002 CG5588-RA 244..828 18..602 2910 99.8 Plus
Mtl-RB 2097 CG5588-RB 339..923 18..602 2910 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:34:17
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27638073..27638306 134..367 1155 99.6 Plus
3R 32079331 3R 27638378..27638541 366..529 820 100 Plus
3R 32079331 3R 27637888..27638003 18..133 580 100 Plus
3L 28110227 3L 1301985..1302334 388..39 415 74.6 Minus
3R 32079331 3R 27638622..27638697 527..602 380 100 Plus
3L 28110227 3L 7434290..7434503 247..34 290 75.7 Minus
X 23542271 X 19698114..19698237 183..306 200 77.4 Plus
Blast to na_te.dros performed on 2015-02-11 10:34:19 has no hits.

BO14791.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:35:59 Download gff for BO14791.5prime
Subject Subject Range Query Range Percent Splice Strand
Mtl-PB 1..588 18..606 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:57 Download gff for BO14791.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5588-PC 1..588 18..606 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:09:38 Download gff for BO14791.5prime
Subject Subject Range Query Range Percent Splice Strand
Mtl-RB 331..926 9..606 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:35:18 Download gff for BO14791.5prime
Subject Subject Range Query Range Percent Splice Strand
Mtl-RB 331..926 9..606 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:35:18 Download gff for BO14791.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 27637880..27638003 9..133 97 -> Plus
3R 27638073..27638305 134..366 99 -> Plus
3R 27638379..27638539 367..527 100 -> Plus
3R 27638623..27638700 528..606 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:09:38 Download gff for BO14791.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 23463602..23463725 9..133 97 -> Plus
arm_3R 23463795..23464027 134..366 99 -> Plus
arm_3R 23464101..23464261 367..527 100 -> Plus
arm_3R 23464345..23464422 528..606 97   Plus

BO14791.complete Sequence

620 bp assembled on 2008-08-15

GenBank Submission: FJ633245

> BO14791.complete
GAAGTTATCAGTCGACAATGTCAACCGGAAGGCCCATAAAGTGTGTAGTC
GTTGGTGACGGCACCGTCGGAAAGACCTGCATGCTAATCTCCTACACGAC
AGACTGCTTTCCCGGCGAATATGTGCCCACAGTCTTCGACAACTACTCGG
CGCCCATGCAAGTGGACACAATACAGGTCTCGCTGGGACTGTGGGATACG
GCGGGTCAGGAGGACTACGACCGCCTGAGACCGCTATCCTACCCGCAGAC
AGACGTTTTCCTGATATGCTACAGCGTGGCGAGTCCCTCGTCCTTTGAGA
ACGTCACCTCAAAATGGTATCCGGAGATAAAGCACCACTGTCCCGATGCG
CCCATCATTCTAGTTGGCACCAAAATCGATTTGCGCGAAGATCGAGAGAC
ACTCAGCGGCCTGGCAGAGCAGGGACTGACGCCGCTGAAGCGCGAGCAGG
GCCAGAAGCTGGCAAACAAGATACGCGCTGTGAAATACATGGAGTGCTCC
GCCTTGACGCAGCGCGGTCTCAAGCCGGTGTTCGAGGAAGCGGTGCGCGC
GGTGCTCAGACCAGAGCCGCTAAAGCGACGCCAGCGAAAGTGTTTAATAA
TGGCAAGCTTTCTAGACCAT

BO14791.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:04:27
Subject Length Description Subject Range Query Range Score Percent Strand
Mtl-RC 588 CG5588-PC 1..585 18..602 2910 99.8 Plus
Mtl-RA 588 CG5588-PA 1..585 18..602 2910 99.8 Plus
Mtl-RB 588 CG5588-PB 1..585 18..602 2910 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:04:28
Subject Length Description Subject Range Query Range Score Percent Strand
Mtl-RC 1197 CG5588-RC 215..799 18..602 2910 99.8 Plus
Mtl-RA 2002 CG5588-RA 244..828 18..602 2910 99.8 Plus
Mtl-RB 2097 CG5588-RB 339..923 18..602 2910 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:04:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27638073..27638306 134..367 1155 99.6 Plus
3R 32079331 3R 27638378..27638541 366..529 820 100 Plus
3R 32079331 3R 27637888..27638003 18..133 580 100 Plus
3L 28110227 3L 1301985..1302334 388..39 415 74.6 Minus
3R 32079331 3R 27638622..27638697 527..602 380 100 Plus
3L 28110227 3L 7434290..7434503 247..34 290 75.7 Minus
X 23542271 X 19698114..19698237 183..306 200 77.4 Plus
Blast to na_te.dros performed on 2014-11-28 01:04:27 has no hits.

BO14791.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:28:33 Download gff for BO14791.complete
Subject Subject Range Query Range Percent Splice Strand
Mtl-RC 214..799 17..604 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:38:13 Download gff for BO14791.complete
Subject Subject Range Query Range Percent Splice Strand
Mtl-RB 338..923 17..604 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-03 15:04:33 Download gff for BO14791.complete
Subject Subject Range Query Range Percent Splice Strand
Mtl-RC 207..802 9..606 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:43:52 Download gff for BO14791.complete
Subject Subject Range Query Range Percent Splice Strand
Mtl-RB 338..923 17..604 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:43:52 Download gff for BO14791.complete
Subject Subject Range Query Range Percent Splice Strand
3R 27637887..27638003 17..133 99 -> Plus
3R 27638073..27638305 134..366 99 -> Plus
3R 27638379..27638539 367..527 100 -> Plus
3R 27638623..27638697 528..604 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:38:13 Download gff for BO14791.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 23464101..23464261 367..527 100 -> Plus
arm_3R 23464345..23464419 528..604 97   Plus
arm_3R 23463609..23463725 17..133 99 -> Plus
arm_3R 23463795..23464027 134..366 99 -> Plus

BO14791.pep Sequence

Translation from 17 to 620

> BO14791.pep
MSTGRPIKCVVVGDGTVGKTCMLISYTTDCFPGEYVPTVFDNYSAPMQVD
TIQVSLGLWDTAGQEDYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKW
YPEIKHHCPDAPIILVGTKIDLREDRETLSGLAEQGLTPLKREQGQKLAN
KIRAVKYMECSALTQRGLKPVFEEAVRAVLRPEPLKRRQRKCLIMASFLD
H

BO14791.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:26:13
Subject Length Description Subject Range Query Range Score Percent Strand
Mtl-PC 195 CG5588-PC 1..195 1..195 1030 100 Plus
Mtl-PA 195 CG5588-PA 1..195 1..195 1030 100 Plus
Mtl-PB 195 CG5588-PB 1..195 1..195 1030 100 Plus
Rac1-PB 192 CG2248-PB 4..192 7..195 709 66.7 Plus
Rac1-PA 192 CG2248-PA 4..192 7..195 709 66.7 Plus