Clone Sequence Records
BO14802.3prime Sequence
626 bp (626 high quality bases) assembled on 2006-06-16
> BO14802.3prime
ATGGTCTAGAAAGCTTGCGGCAATTTTTCGGCAATGATCATTTACGGTCA
GAGTAGTGCCCTGTGGACAAATTCGCGTTGTTTCCAGGACAATCCTTGGC
CCAATAACCACACTAGTGGCACTGCTAGCATTGGTGGCTTCCGTATGATC
CCAAGGCGCTGGCTTATCTGAACTAGATTCCTGGCCGAAGGTTATCATCT
TGGACTCGCTGGAAGGATGTGCATGATTTTTCGAAATGCTGGGCACATCG
TTCATTTTAATCTCTTGTGTTGATGAGTTTCCCTGTGGTTCGGTCAAGTT
TTTCGAATCATTGGTAGTATTTGCCGGTGACTCATGCTTGTTGTCGTTAG
CCGTAGTTCTCGGTGTGCCCTTTTTGATTTCTTTGAGGATTGGTAGATTT
ACATTTGTGGCTCTAGTCACCTCCGCCATTTCTCGCTCGATTTCCTTAAG
TCTGGATTCCAGTCGGATGGCTGTGGCATTTGGCTTGGACTCCGAGGGAA
ACACAAACTGATCGCTGGGCACTCGAGCTGCACGATTTGTATCCAATGAC
AGACACAGCCAGACAAACAAAAACAGCAGCTTCGGCCAGGGAAGCCGCCG
CGTAATTGCCATGTCGACTGATAACT
BO14802.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11400-PA | 597 | CG11400-RA | 1..594 | 612..19 | 2970 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:41:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11400-RB | 1217 | CG11400-RB | 80..673 | 612..19 | 2970 | 100 | Minus |
CG11400-RA | 724 | CG11400-RA | 80..673 | 612..19 | 2970 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:41:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17134208..17134801 | 612..19 | 2970 | 100 | Minus |
2R | 25286936 | 2R | 17135811..17135935 | 612..488 | 505 | 93.6 | Minus |
2R | 25286936 | 2R | 17135937..17136068 | 150..19 | 375 | 85.6 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:41:03 has no hits.
BO14802.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:05 Download gff for
BO14802.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11400-PA | 1..597 | 18..612 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:05 Download gff for
BO14802.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11400-PA | 1..597 | 18..612 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:48:48 Download gff for
BO14802.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11400-RA | 80..679 | 11..612 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:00:04 Download gff for
BO14802.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11400-RA | 80..679 | 11..612 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:00:04 Download gff for
BO14802.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17134208..17134807 | 11..612 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:48:48 Download gff for
BO14802.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13021713..13022312 | 11..612 | 99 | | Minus |
BO14802.5prime Sequence
626 bp (625 high quality bases) assembled on 2006-06-16
> BO14802.5prime
GAAGTTATCAGTCGACATGGCAATTACGCGGCGGCTTCCCTGGCCGAAGC
TGCTGTTTTTGTTTGTCTGGCTGTGTCTGTCATTGGATACAAATCGTGCA
GCTCGAGTGCCCAGCGATCAGTTTGTGTTTCCCTCGGAGTCCAAGCCAAA
TGCCACAGCCATCCGACTGGAATCCAGACTTAAGGAAATCGAGCGAGAAA
TGGCGGAGGTGACTAGAGCCACAAATGTAAATCTACCAATCCTCAAAGAA
ATCAAAAAGGGCACACCGAGAACTACGGCTAACGACAACAAGCATGAGTC
ACCGGCAAATACTACCAATGATTCGAAAAACTTGACCGAACCACAGGGAA
ACTCATCAACACAAGAGATTAAAATGAACGATGTGCCCAGCATTTCGAAA
AATCATGCACATCCTTCCAGCGAGTCCAAGATGATAACCTTCGGCCAGGA
ATCTAGTTCAGATAAGCCAGCGCCTTGGGATCATACGGAAGCCACCAATG
CTAGCAGTGCCACTAGTGTGGTTATTGGGCCAAGGATTGTCCTGGAAACA
ACGCGAATTTGTCCACAGGGCACTACTCTGACCGTAAATGATCATTGCCG
AAAAATTGCCGCAAGCTTTCTAGACC
BO14802.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11400-PA | 597 | CG11400-RA | 1..594 | 17..610 | 2970 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:18:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11400-RB | 1217 | CG11400-RB | 80..673 | 17..610 | 2970 | 100 | Plus |
CG11400-RA | 724 | CG11400-RA | 80..673 | 17..610 | 2970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:18:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17134208..17134801 | 17..610 | 2970 | 100 | Plus |
2R | 25286936 | 2R | 17135811..17135935 | 17..141 | 505 | 93.6 | Plus |
2R | 25286936 | 2R | 17135937..17136068 | 479..610 | 375 | 85.6 | Plus |
Blast to na_te.dros performed on 2015-02-11 13:18:47 has no hits.
BO14802.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:06 Download gff for
BO14802.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11400-PA | 1..597 | 17..611 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:07 Download gff for
BO14802.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11400-PA | 1..597 | 17..611 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:09:55 Download gff for
BO14802.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11400-RA | 80..679 | 17..618 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:46:14 Download gff for
BO14802.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11400-RA | 80..679 | 17..618 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:46:14 Download gff for
BO14802.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17134208..17134807 | 17..618 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:09:55 Download gff for
BO14802.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13021713..13022312 | 17..618 | 99 | | Plus |
BO14802.complete Sequence
628 bp (628 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633247
> BO14802.complete
GAAGTTATCAGTCGACATGGCAATTACGCGGCGGCTTCCCTGGCCGAAGC
TGCTGTTTTTGTTTGTCTGGCTGTGTCTGTCATTGGATACAAATCGTGCA
GCTCGAGTGCCCAGCGATCAGTTTGTGTTTCCCTCGGAGTCCAAGCCAAA
TGCCACAGCCATCCGACTGGAATCCAGACTTAAGGAAATCGAGCGAGAAA
TGGCGGAGGTGACTAGAGCCACAAATGTAAATCTACCAATCCTCAAAGAA
ATCAAAAAGGGCACACCGAGAACTACGGCTAACGACAACAAGCATGAGTC
ACCGGCAAATACTACCAATGATTCGAAAAACTTGACCGAACCACAGGGAA
ACTCATCAACACAAGAGATTAAAATGAACGATGTGCCCAGCATTTCGAAA
AATCATGCACATCCTTCCAGCGAGTCCAAGATGATAACCTTCGGCCAGGA
ATCTAGTTCAGATAAGCCAGCGCCTTGGGATCATACGGAAGCCACCAATG
CTAGCAGTGCCACTAGTGTGGTTATTGGGCCAAGGATTGTCCTGGAAACA
ACGCGAATTTGTCCACAGGGCACTACTCTGACCGTAAATGATCATTGCCG
AAAAATTGCCGCAAGCTTTCTAGACCAT
BO14802.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:03:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11400-RB | 597 | CG11400-PB | 1..594 | 17..610 | 2970 | 100 | Plus |
CG11400-RA | 597 | CG11400-PA | 1..594 | 17..610 | 2970 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:03:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11400-RB | 1217 | CG11400-RB | 80..673 | 17..610 | 2970 | 100 | Plus |
CG11400-RA | 724 | CG11400-RA | 80..673 | 17..610 | 2970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:03:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17134208..17134801 | 17..610 | 2970 | 100 | Plus |
2R | 25286936 | 2R | 17135811..17135935 | 17..141 | 505 | 93.6 | Plus |
2R | 25286936 | 2R | 17135937..17136068 | 479..610 | 375 | 85.6 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:03:27 has no hits.
BO14802.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:09:00 Download gff for
BO14802.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11400-RA | 1..597 | 17..611 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:25:57 Download gff for
BO14802.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11400-RA | 52..651 | 17..618 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:03 Download gff for
BO14802.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11400-RA | 80..673 | 17..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:09:00 Download gff for
BO14802.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11400-RA | 52..651 | 17..618 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:58:59 Download gff for
BO14802.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11400-RA | 80..673 | 17..612 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:58:59 Download gff for
BO14802.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17134208..17134801 | 17..612 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:03 Download gff for
BO14802.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13021713..13022306 | 17..612 | 99 | | Plus |
BO14802.pep Sequence
Translation from 16 to 628
> BO14802.pep
MAITRRLPWPKLLFLFVWLCLSLDTNRAARVPSDQFVFPSESKPNATAIR
LESRLKEIEREMAEVTRATNVNLPILKEIKKGTPRTTANDNKHESPANTT
NDSKNLTEPQGNSSTQEIKMNDVPSISKNHAHPSSESKMITFGQESSSDK
PAPWDHTEATNASSATSVVIGPRIVLETTRICPQGTTLTVNDHCRKIAAS
FLDH
BO14802.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:46:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11400-PB | 198 | CG11400-PB | 1..198 | 1..198 | 1026 | 100 | Plus |
CG11400-PA | 198 | CG11400-PA | 1..198 | 1..198 | 1026 | 100 | Plus |