Clone BO14802 Report

Search the DGRC for BO14802

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:148
Well:2
Vector:pDNR-Dual
Associated Gene/TranscriptCG11400-RA
Protein status:BO14802.pep: validated full length
Sequenced Size:628

Clone Sequence Records

BO14802.3prime Sequence

626 bp (626 high quality bases) assembled on 2006-06-16

> BO14802.3prime
ATGGTCTAGAAAGCTTGCGGCAATTTTTCGGCAATGATCATTTACGGTCA
GAGTAGTGCCCTGTGGACAAATTCGCGTTGTTTCCAGGACAATCCTTGGC
CCAATAACCACACTAGTGGCACTGCTAGCATTGGTGGCTTCCGTATGATC
CCAAGGCGCTGGCTTATCTGAACTAGATTCCTGGCCGAAGGTTATCATCT
TGGACTCGCTGGAAGGATGTGCATGATTTTTCGAAATGCTGGGCACATCG
TTCATTTTAATCTCTTGTGTTGATGAGTTTCCCTGTGGTTCGGTCAAGTT
TTTCGAATCATTGGTAGTATTTGCCGGTGACTCATGCTTGTTGTCGTTAG
CCGTAGTTCTCGGTGTGCCCTTTTTGATTTCTTTGAGGATTGGTAGATTT
ACATTTGTGGCTCTAGTCACCTCCGCCATTTCTCGCTCGATTTCCTTAAG
TCTGGATTCCAGTCGGATGGCTGTGGCATTTGGCTTGGACTCCGAGGGAA
ACACAAACTGATCGCTGGGCACTCGAGCTGCACGATTTGTATCCAATGAC
AGACACAGCCAGACAAACAAAAACAGCAGCTTCGGCCAGGGAAGCCGCCG
CGTAATTGCCATGTCGACTGATAACT

BO14802.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG11400-PA 597 CG11400-RA 1..594 612..19 2970 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:41:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG11400-RB 1217 CG11400-RB 80..673 612..19 2970 100 Minus
CG11400-RA 724 CG11400-RA 80..673 612..19 2970 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:41:00
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17134208..17134801 612..19 2970 100 Minus
2R 25286936 2R 17135811..17135935 612..488 505 93.6 Minus
2R 25286936 2R 17135937..17136068 150..19 375 85.6 Minus
Blast to na_te.dros performed on 2015-02-10 22:41:03 has no hits.

BO14802.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:05 Download gff for BO14802.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11400-PA 1..597 18..612 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:05 Download gff for BO14802.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11400-PA 1..597 18..612 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:48:48 Download gff for BO14802.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 80..679 11..612 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:00:04 Download gff for BO14802.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 80..679 11..612 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:00:04 Download gff for BO14802.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 17134208..17134807 11..612 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:48:48 Download gff for BO14802.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13021713..13022312 11..612 99   Minus

BO14802.5prime Sequence

626 bp (625 high quality bases) assembled on 2006-06-16

> BO14802.5prime
GAAGTTATCAGTCGACATGGCAATTACGCGGCGGCTTCCCTGGCCGAAGC
TGCTGTTTTTGTTTGTCTGGCTGTGTCTGTCATTGGATACAAATCGTGCA
GCTCGAGTGCCCAGCGATCAGTTTGTGTTTCCCTCGGAGTCCAAGCCAAA
TGCCACAGCCATCCGACTGGAATCCAGACTTAAGGAAATCGAGCGAGAAA
TGGCGGAGGTGACTAGAGCCACAAATGTAAATCTACCAATCCTCAAAGAA
ATCAAAAAGGGCACACCGAGAACTACGGCTAACGACAACAAGCATGAGTC
ACCGGCAAATACTACCAATGATTCGAAAAACTTGACCGAACCACAGGGAA
ACTCATCAACACAAGAGATTAAAATGAACGATGTGCCCAGCATTTCGAAA
AATCATGCACATCCTTCCAGCGAGTCCAAGATGATAACCTTCGGCCAGGA
ATCTAGTTCAGATAAGCCAGCGCCTTGGGATCATACGGAAGCCACCAATG
CTAGCAGTGCCACTAGTGTGGTTATTGGGCCAAGGATTGTCCTGGAAACA
ACGCGAATTTGTCCACAGGGCACTACTCTGACCGTAAATGATCATTGCCG
AAAAATTGCCGCAAGCTTTCTAGACC

BO14802.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG11400-PA 597 CG11400-RA 1..594 17..610 2970 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:18:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG11400-RB 1217 CG11400-RB 80..673 17..610 2970 100 Plus
CG11400-RA 724 CG11400-RA 80..673 17..610 2970 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:18:46
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17134208..17134801 17..610 2970 100 Plus
2R 25286936 2R 17135811..17135935 17..141 505 93.6 Plus
2R 25286936 2R 17135937..17136068 479..610 375 85.6 Plus
Blast to na_te.dros performed on 2015-02-11 13:18:47 has no hits.

BO14802.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:06 Download gff for BO14802.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11400-PA 1..597 17..611 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:07 Download gff for BO14802.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11400-PA 1..597 17..611 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:09:55 Download gff for BO14802.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 80..679 17..618 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:46:14 Download gff for BO14802.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 80..679 17..618 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:46:14 Download gff for BO14802.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 17134208..17134807 17..618 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:09:55 Download gff for BO14802.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13021713..13022312 17..618 99   Plus

BO14802.complete Sequence

628 bp (628 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633247

> BO14802.complete
GAAGTTATCAGTCGACATGGCAATTACGCGGCGGCTTCCCTGGCCGAAGC
TGCTGTTTTTGTTTGTCTGGCTGTGTCTGTCATTGGATACAAATCGTGCA
GCTCGAGTGCCCAGCGATCAGTTTGTGTTTCCCTCGGAGTCCAAGCCAAA
TGCCACAGCCATCCGACTGGAATCCAGACTTAAGGAAATCGAGCGAGAAA
TGGCGGAGGTGACTAGAGCCACAAATGTAAATCTACCAATCCTCAAAGAA
ATCAAAAAGGGCACACCGAGAACTACGGCTAACGACAACAAGCATGAGTC
ACCGGCAAATACTACCAATGATTCGAAAAACTTGACCGAACCACAGGGAA
ACTCATCAACACAAGAGATTAAAATGAACGATGTGCCCAGCATTTCGAAA
AATCATGCACATCCTTCCAGCGAGTCCAAGATGATAACCTTCGGCCAGGA
ATCTAGTTCAGATAAGCCAGCGCCTTGGGATCATACGGAAGCCACCAATG
CTAGCAGTGCCACTAGTGTGGTTATTGGGCCAAGGATTGTCCTGGAAACA
ACGCGAATTTGTCCACAGGGCACTACTCTGACCGTAAATGATCATTGCCG
AAAAATTGCCGCAAGCTTTCTAGACCAT

BO14802.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:03:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG11400-RB 597 CG11400-PB 1..594 17..610 2970 100 Plus
CG11400-RA 597 CG11400-PA 1..594 17..610 2970 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:03:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG11400-RB 1217 CG11400-RB 80..673 17..610 2970 100 Plus
CG11400-RA 724 CG11400-RA 80..673 17..610 2970 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:03:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17134208..17134801 17..610 2970 100 Plus
2R 25286936 2R 17135811..17135935 17..141 505 93.6 Plus
2R 25286936 2R 17135937..17136068 479..610 375 85.6 Plus
Blast to na_te.dros performed on 2014-11-27 15:03:27 has no hits.

BO14802.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:09:00 Download gff for BO14802.complete
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 1..597 17..611 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:25:57 Download gff for BO14802.complete
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 52..651 17..618 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:03 Download gff for BO14802.complete
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 80..673 17..612 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:09:00 Download gff for BO14802.complete
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 52..651 17..618 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:58:59 Download gff for BO14802.complete
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 80..673 17..612 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:58:59 Download gff for BO14802.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17134208..17134801 17..612 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:03 Download gff for BO14802.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13021713..13022306 17..612 99   Plus

BO14802.pep Sequence

Translation from 16 to 628

> BO14802.pep
MAITRRLPWPKLLFLFVWLCLSLDTNRAARVPSDQFVFPSESKPNATAIR
LESRLKEIEREMAEVTRATNVNLPILKEIKKGTPRTTANDNKHESPANTT
NDSKNLTEPQGNSSTQEIKMNDVPSISKNHAHPSSESKMITFGQESSSDK
PAPWDHTEATNASSATSVVIGPRIVLETTRICPQGTTLTVNDHCRKIAAS
FLDH

BO14802.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:46:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG11400-PB 198 CG11400-PB 1..198 1..198 1026 100 Plus
CG11400-PA 198 CG11400-PA 1..198 1..198 1026 100 Plus