Clone Sequence Records
BO14807.3prime Sequence
416 bp (416 high quality bases) assembled on 2006-06-16
> BO14807.3prime
ATGGTCTAGAAAGCTTGCGGCTTCGACGGCGGGTTCCATGGACAAGGACC
TGCTGCTCACACTCCCGGCGGGGGTCATGATGTCCTCCAGCATTTGGTTG
AGCGACTCGGAGCCCAGAGCGTACTCCTGCTTATTGGCACTTCGGTTGTG
CATGGCGTCCAAGTAGACGCCACTCGCATTGCGCTCGCTGCTCAGAATGT
GCTGCATGACATTGCTGATCTGTTCGGAGCCCAGGATCTTCGGTTGCTCG
GTGGCCAGTCCATCGATGACCGCAGTTTCCAGCTGGCTTGAAATTTTGGC
CGGCGACTCCTCCTCGTTGGCAGTTTTTAGAAAACGAATCGCCTGTGCAG
AGGCCAAGGCTCCGGCCGTAAAAGAGGTCAGCAACTGAGCAATCGAAATC
ATGTCGACTGATAACT
BO14807.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17648-PA | 387 | CG17648-RA | 1..384 | 402..19 | 1920 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:49:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17648-RA | 541 | CG17648-RA | 76..459 | 402..19 | 1920 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:49:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1752383..1752766 | 402..19 | 1920 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 15:49:11 has no hits.
BO14807.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:09 Download gff for
BO14807.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17648-PA | 1..387 | 18..402 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:11 Download gff for
BO14807.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17648-PA | 1..387 | 18..402 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:31:50 Download gff for
BO14807.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17648-RA | 72..471 | 7..407 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:32:38 Download gff for
BO14807.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17648-RA | 72..471 | 7..407 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:32:38 Download gff for
BO14807.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1752379..1752778 | 7..407 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:31:50 Download gff for
BO14807.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1752379..1752778 | 7..407 | 98 | | Minus |
BO14807.5prime Sequence
416 bp (415 high quality bases) assembled on 2006-06-16
> BO14807.5prime
GAAGTTATCAGTCGACATGATTTCGATTGCTCAGTTGCTGACCTCTTTTA
CGGCCGGAGCCTTGGCCTCTGCACAGGCGATTCGTTTTCTAAAAACTGCC
AACGAGGAGGAGTCGCCGGCCAAAATTTCAAGCCAGCTGGAAACTGCGGT
CATCGATGGACTGGCCACCGAGCAACCGAAGATCCTGGGCTCCGAACAGA
TCAGCAATGTCATGCAGCACATTCTGAGCAGCGAGCGCAATGCGAGTGGC
GTCTACTTGGACGCCATGCACAACCGAAGTGCCAATAAGCAGGAGTACGC
TCTGGGCTCCGAGTCGCTCAACCAAATGCTGGAGGACATCATGACCCCCG
CCGGGAGTGTGAGCAGCAGGTCCTTGTCCATGGAACCCGCCGTCGAAGCC
GCAAGCTTTCTAGACC
BO14807.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17648-PA | 387 | CG17648-RA | 1..384 | 17..400 | 1920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:36:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17648-RA | 541 | CG17648-RA | 76..459 | 17..400 | 1920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:36:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1752383..1752766 | 17..400 | 1920 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 12:36:36 has no hits.
BO14807.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:10 Download gff for
BO14807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17648-PA | 1..387 | 17..401 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:12 Download gff for
BO14807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17648-PA | 1..387 | 17..401 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:10:55 Download gff for
BO14807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17648-RA | 72..471 | 12..412 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:31:30 Download gff for
BO14807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17648-RA | 72..471 | 12..412 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:31:30 Download gff for
BO14807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1752379..1752778 | 12..412 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:10:55 Download gff for
BO14807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1752379..1752778 | 12..412 | 98 | | Plus |
BO14807.complete Sequence
418 bp (418 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633248
> BO14807.complete
GAAGTTATCAGTCGACATGATTTCGATTGCTCAGTTGCTGACCTCTTTTA
CGGCCGGAGCCTTGGCCTCTGCACAGGCGATTCGTTTTCTAAAAACTGCC
AACGAGGAGGAGTCGCCGGCCAAAATTTCAAGCCAGCTGGAAACTGCGGT
CATCGATGGACTGGCCACCGAGCAACCGAAGATCCTGGGCTCCGAACAGA
TCAGCAATGTCATGCAGCACATTCTGAGCAGCGAGCGCAATGCGAGTGGC
GTCTACTTGGACGCCATGCACAACCGAAGTGCCAATAAGCAGGAGTACGC
TCTGGGCTCCGAGTCGCTCAACCAAATGCTGGAGGACATCATGACCCCCG
CCGGGAGTGTGAGCAGCAGGTCCTTGTCCATGGAACCCGCCGTCGAAGCC
GCAAGCTTTCTAGACCAT
BO14807.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:42:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17648-RA | 387 | CG17648-PA | 1..384 | 17..400 | 1920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:42:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17648-RA | 541 | CG17648-RA | 76..459 | 17..400 | 1920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:42:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1752383..1752766 | 17..400 | 1920 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:42:02 has no hits.
BO14807.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:29 Download gff for
BO14807.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17648-RA | 1..387 | 17..401 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:14 Download gff for
BO14807.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17648-RA | 31..430 | 12..412 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:34:06 Download gff for
BO14807.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17648-RA | 76..459 | 17..402 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:29 Download gff for
BO14807.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17648-RA | 31..430 | 12..412 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:39:56 Download gff for
BO14807.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17648-RA | 76..459 | 17..402 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:39:56 Download gff for
BO14807.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1752383..1752766 | 17..402 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:34:06 Download gff for
BO14807.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1752383..1752766 | 17..402 | 99 | | Plus |
BO14807.pep Sequence
Translation from 16 to 418
> BO14807.pep
MISIAQLLTSFTAGALASAQAIRFLKTANEEESPAKISSQLETAVIDGLA
TEQPKILGSEQISNVMQHILSSERNASGVYLDAMHNRSANKQEYALGSES
LNQMLEDIMTPAGSVSSRSLSMEPAVEAASFLDH
BO14807.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:47:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17648-PA | 128 | CG17648-PA | 1..128 | 1..128 | 612 | 100 | Plus |
