Clone BO14808 Report

Search the DGRC for BO14808

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:148
Well:8
Vector:pDNR-Dual
Associated Gene/TranscriptCG1537-RA
Protein status:BO14808.pep: validated full length
Sequenced Size:439

Clone Sequence Records

BO14808.3prime Sequence

437 bp (437 high quality bases) assembled on 2006-06-16

> BO14808.3prime
ATGGTCTAGAAAGCTTGCATCGAAGTAATTCATAAGCGTACACTGGACGC
TGGTACAGTCGGGCAGTGAAGTGAACAGCACGCAGGATAACTTATAATCG
TAGATGAACTCGCAAGTGGGGAAGCTGACGGTGAAGAACCAGGTGCACTT
GAAGTTGCACAATATGCCATAGGGCTTCTTCAGCTGCTCCTTTTTGTTGA
CCACAGTGTTCTGCAGATTGTAGCCATCGTAACGGCGCCAGCAATGGTTA
ATGTTACGGCGAATGTGGTGACTGCCGCCATGGTGATGAAAGTCCCGTCC
CTCCAGCTGACCCCCGTGCCCGTTGGTGGCCTCCACGCCTCTGACGCCCC
TGCCACCGAAAAGCAGGAGGTACCAGAGGACCAGGGAGCTGACGATGAAG
ATGTAAGTCACTAATTTGGCCATGTCGACTGATAACT

BO14808.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG1537-PA 408 CG1537-RA 1..405 423..19 2025 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:48:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG1537-RA 869 CG1537-RA 329..733 423..19 2025 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:48:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11062673..11062842 254..423 850 100 Plus
X 23542271 X 11062331..11062463 125..257 665 100 Plus
X 23542271 X 11062163..11062271 19..127 545 100 Plus
Blast to na_te.dros performed on 2015-02-12 03:48:11 has no hits.

BO14808.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:11 Download gff for BO14808.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1537-PA 1..408 15..423 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:14 Download gff for BO14808.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1537-PA 1..408 15..423 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:43:07 Download gff for BO14808.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1537-RA 326..738 12..426 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:52:13 Download gff for BO14808.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1537-RA 326..738 12..426 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:52:13 Download gff for BO14808.3prime
Subject Subject Range Query Range Percent Splice Strand
X 11062158..11062268 12..124 97 <- Plus
X 11062331..11062463 125..257 100 <- Plus
X 11062677..11062845 258..426 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:43:07 Download gff for BO14808.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10956191..10956301 12..124 97 <- Plus
arm_X 10956364..10956496 125..257 100 <- Plus
arm_X 10956710..10956878 258..426 99   Plus

BO14808.5prime Sequence

437 bp (436 high quality bases) assembled on 2006-06-16

> BO14808.5prime
GAAGTTATCAGTCGACATGGCCAAATTAGTGACTTACATCTTCATCGTCA
GCTCCCTGGTCCTCTGGTACCTCCTGCTTTTCGGTGGCAGGGGCGTCAGA
GGCGTGGAGGCCACCAACGGGCACGGGGGTCAGCTGGAGGGACGGGACTT
TCATCACCATGGCGGCAGTCACCACATTCGCCGTAACATTAACCATTGCT
GGCGCCGTTACGATGGCTACAATCTGCAGAACACTGTGGTCAACAAAAAG
GAGCAGCTGAAGAAGCCCTATGGCATATTGTGCAACTTCAAGTGCACCTG
GTTCTTCACCGTCAGCTTCCCCACTTGCGAGTTCATCTACGATTATAAGT
TATCCTGCGTGCTGTTCACTTCACTGCCCGACTGTACCAGCGTCCAGTGT
ACGCTTATGAATTACTTCGATGCAAGCTTTCTAGACC

BO14808.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG1537-PA 408 CG1537-RA 1..405 17..421 2025 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:51:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG1537-RA 869 CG1537-RA 329..733 17..421 2025 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:51:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11062673..11062842 186..17 850 100 Minus
X 23542271 X 11062331..11062463 315..183 665 100 Minus
X 23542271 X 11062163..11062271 421..313 545 100 Minus
Blast to na_te.dros performed on 2015-02-09 22:51:05 has no hits.

BO14808.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:12 Download gff for BO14808.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1537-PA 1..408 17..425 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:15 Download gff for BO14808.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1537-PA 1..408 17..425 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:23:53 Download gff for BO14808.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1537-RA 326..738 14..428 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:49:24 Download gff for BO14808.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1537-RA 326..738 14..428 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:49:24 Download gff for BO14808.5prime
Subject Subject Range Query Range Percent Splice Strand
X 11062158..11062268 316..428 97 <- Minus
X 11062331..11062463 183..315 100 <- Minus
X 11062677..11062845 14..182 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:23:53 Download gff for BO14808.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10956191..10956301 316..428 97 <- Minus
arm_X 10956364..10956496 183..315 100 <- Minus
arm_X 10956710..10956878 14..182 99   Minus

BO14808.complete Sequence

439 bp (439 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633249

> BO14808.complete
GAAGTTATCAGTCGACATGGCCAAATTAGTGACTTACATCTTCATCGTCA
GCTCCCTGGTCCTCTGGTACCTCCTGCTTTTCGGTGGCAGGGGCGTCAGA
GGCGTGGAGGCCACCAACGGGCACGGGGGTCAGCTGGAGGGACGGGACTT
TCATCACCATGGCGGCAGTCACCACATTCGCCGTAACATTAACCATTGCT
GGCGCCGTTACGATGGCTACAATCTGCAGAACACTGTGGTCAACAAAAAG
GAGCAGCTGAAGAAGCCCTATGGCATATTGTGCAACTTCAAGTGCACCTG
GTTCTTCACCGTCAGCTTCCCCACTTGCGAGTTCATCTACGATTATAAGT
TATCCTGCGTGCTGTTCACTTCACTGCCCGACTGTACCAGCGTCCAGTGT
ACGCTTATGAATTACTTCGATGCAAGCTTTCTAGACCAT

BO14808.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:02:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG1537-RA 408 CG1537-PA 1..405 17..421 2025 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:02:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG1537-RA 869 CG1537-RA 329..733 17..421 2025 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:02:31
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11062673..11062842 186..17 850 100 Minus
X 23542271 X 11062331..11062463 315..183 665 100 Minus
X 23542271 X 11062163..11062271 421..313 545 100 Minus
Blast to na_te.dros performed on 2014-11-27 15:02:31 has no hits.

BO14808.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:30 Download gff for BO14808.complete
Subject Subject Range Query Range Percent Splice Strand
CG1537-RA 1..408 17..425 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:15 Download gff for BO14808.complete
Subject Subject Range Query Range Percent Splice Strand
CG1537-RA 241..653 14..428 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:36:27 Download gff for BO14808.complete
Subject Subject Range Query Range Percent Splice Strand
CG1537-RA 329..733 17..423 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:30 Download gff for BO14808.complete
Subject Subject Range Query Range Percent Splice Strand
CG1537-RA 241..653 14..428 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:58:34 Download gff for BO14808.complete
Subject Subject Range Query Range Percent Splice Strand
CG1537-RA 329..733 17..423 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:58:34 Download gff for BO14808.complete
Subject Subject Range Query Range Percent Splice Strand
X 11062161..11062268 316..423 98 <- Minus
X 11062331..11062463 183..315 100 <- Minus
X 11062677..11062842 17..182 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:36:27 Download gff for BO14808.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10956194..10956301 316..423 98 <- Minus
arm_X 10956364..10956496 183..315 100 <- Minus
arm_X 10956710..10956875 17..182 100   Minus

BO14808.pep Sequence

Translation from 16 to 439

> BO14808.pep
MAKLVTYIFIVSSLVLWYLLLFGGRGVRGVEATNGHGGQLEGRDFHHHGG
SHHIRRNINHCWRRYDGYNLQNTVVNKKEQLKKPYGILCNFKCTWFFTVS
FPTCEFIYDYKLSCVLFTSLPDCTSVQCTLMNYFDASFLDH

BO14808.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:47:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG1537-PA 135 CG1537-PA 1..135 1..135 760 100 Plus
CG1545-PB 128 CG1545-PB 51..115 59..128 148 37.1 Plus