Clone BO14810 Report

Search the DGRC for BO14810

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:148
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptKaz1-ORFB-RA
Protein status:BO14810.pep: validated full length
Sequenced Size:376

Clone Sequence Records

BO14810.3prime Sequence

374 bp (373 high quality bases) assembled on 2006-06-16

> BO14810.3prime
ATGGTCTAGAAAGCTTGCAGTCTGACAAATTCCCTTGTGCACCTTCCGGA
TGTTTAGGCCGCAGTTCAAGGCGCAGTTGAACTTGTTTTCATTGTAGTAG
TTCACGTTATCACTGCCGCAGATTGGATTGTACTCGCTGGTGGCCGGGCA
TGAATGGAAACAGGCGAAATAGCGCGGTGACTGGGTGGTTGGTGGAGCAG
CGTTGGCCGGGGTACTGCCCCCCGCATTCGGAGATATCGTAGGTTCAGTG
GGTTGCCGAGGCCTCAACCAGGGGTTTTCGCTATCGAACTGCGGGTAGCA
CTGCGCCATCCCAATCAATAGCAGGGCAAGACCTGAAACAAATATTTTGA
TCCAATCCATGTCGACTGATAACT

BO14810.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG1220-PA 345 Kaz1-ORFB-RA 1..342 360..19 1710 100 Minus
CG1220-PE 345 Kaz1-ORFB-RE 1..342 360..19 1710 100 Minus
CG1220-PF 345 Kaz1-ORFB-RF 1..342 360..19 1710 100 Minus
CG1220-PH 348 Kaz1-ORFB-RH 1..307 360..54 1535 100 Minus
CG1220-PC 294 Kaz1-ORFB-RC 1..291 309..19 1455 100 Minus
CG1220-PG 297 Kaz1-ORFB-RG 1..256 309..54 1280 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:46:25
Subject Length Description Subject Range Query Range Score Percent Strand
Kaz1-ORFB-RF 1130 CG1220-RF 616..961 364..19 1715 99.7 Minus
Kaz1-ORFB-RE 1143 CG1220-RE 629..974 364..19 1715 99.7 Minus
Kaz1-ORFB-RA 562 CG1220-RA 48..393 364..19 1715 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:46:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 217490..217775 339..54 1430 100 Minus
Blast to na_te.dros performed on 2015-02-12 13:46:24 has no hits.

BO14810.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:13 Download gff for BO14810.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1220-PF 1..345 18..360 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:16 Download gff for BO14810.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1220-PF 1..345 18..360 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 12:36:10 Download gff for BO14810.3prime
Subject Subject Range Query Range Percent Splice Strand
Kaz1-ORFB-RA 45..393 19..369 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:04:43 Download gff for BO14810.3prime
Subject Subject Range Query Range Percent Splice Strand
Kaz1-ORFB-RA 45..393 19..369 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:04:43 Download gff for BO14810.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 217491..217775 54..338 100 -> Minus
3L 217855..217889 19..53 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 12:36:10 Download gff for BO14810.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 217491..217775 54..338 100 -> Minus
arm_3L 217855..217889 19..53 100   Minus

BO14810.5prime Sequence

374 bp (373 high quality bases) assembled on 2006-06-16

> BO14810.5prime
GAAGTTATCAGTCGACATGGATTGGATCAAAATATTTGTTTCAGGTCTTG
CCCTGCTATTGATTGGGATGGCGCAGTGCTACCCGCAGTTCGATAGCGAA
AACCCCTGGTTGAGGCCTCGGCAACCCACTGAACCTACGATATCTCCGAA
TGCGGGGGGCAGTACCCCGGCCAACGCTGCTCCACCAACCACCCAGTCAC
CGCGCTATTTCGCCTGTTTCCATTCATGCCCGGCCACCAGCGAGTACAAT
CCAATCTGCGGCAGTGATAACGTGAACTACTACAATGAAAACAAGTTCAA
CTGCGCCTTGAACTGCGGCCTAAACATCCGGAAGGTGCACAAGGGAATTT
GTCAGACTGCAAGCTTTCTAGACC

BO14810.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG1220-PA 345 Kaz1-ORFB-RA 1..342 17..358 1710 100 Plus
CG1220-PE 345 Kaz1-ORFB-RE 1..342 17..358 1710 100 Plus
CG1220-PF 345 Kaz1-ORFB-RF 1..342 17..358 1710 100 Plus
CG1220-PH 348 Kaz1-ORFB-RH 1..307 17..323 1535 100 Plus
CG1220-PC 294 Kaz1-ORFB-RC 1..291 68..358 1455 100 Plus
CG1220-PG 297 Kaz1-ORFB-RG 1..256 68..323 1280 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:03:07
Subject Length Description Subject Range Query Range Score Percent Strand
Kaz1-ORFB-RF 1130 CG1220-RF 616..961 13..358 1715 99.7 Plus
Kaz1-ORFB-RE 1143 CG1220-RE 629..974 13..358 1715 99.7 Plus
Kaz1-ORFB-RA 562 CG1220-RA 48..393 13..358 1715 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 11:03:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 217490..217775 38..323 1430 100 Plus
Blast to na_te.dros performed on 2015-02-09 11:03:03 has no hits.

BO14810.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:14 Download gff for BO14810.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1220-PF 1..345 17..359 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:18 Download gff for BO14810.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1220-PF 1..345 17..359 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 16:40:37 Download gff for BO14810.5prime
Subject Subject Range Query Range Percent Splice Strand
Kaz1-ORFB-RA 45..393 8..358 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:41:49 Download gff for BO14810.5prime
Subject Subject Range Query Range Percent Splice Strand
Kaz1-ORFB-RA 45..393 8..358 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 11:41:49 Download gff for BO14810.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 217491..217775 39..323 100 -> Plus
3L 217855..217889 324..358 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 16:40:37 Download gff for BO14810.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 217855..217889 324..358 100   Plus
arm_3L 217491..217775 39..323 100 -> Plus

BO14810.complete Sequence

376 bp (376 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633250

> BO14810.complete
GAAGTTATCAGTCGACATGGATTGGATCAAAATATTTGTTTCAGGTCTTG
CCCTGCTATTGATTGGGATGGCGCAGTGCTACCCGCAGTTCGATAGCGAA
AACCCCTGGTTGAGGCCTCGGCAACCCACTGAACCTACGATATCTCCGAA
TGCGGGGGGCAGTACCCCGGCCAACGCTGCTCCACCAACCACCCAGTCAC
CGCGCTATTTCGCCTGTTTCCATTCATGCCCGGCCACCAGCGAGTACAAT
CCAATCTGCGGCAGTGATAACGTGAACTACTACAATGAAAACAAGTTCAA
CTGCGCCTTGAACTGCGGCCTAAACATCCGGAAGGTGCACAAGGGAATTT
GTCAGACTGCAAGCTTTCTAGACCAT

BO14810.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:01:53
Subject Length Description Subject Range Query Range Score Percent Strand
Kaz1-ORFB-RF 345 CG1220-PF 1..342 17..358 1710 100 Plus
Kaz1-ORFB-RE 345 CG1220-PE 1..342 17..358 1710 100 Plus
Kaz1-ORFB-RA 345 CG1220-PA 1..342 17..358 1710 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:01:54
Subject Length Description Subject Range Query Range Score Percent Strand
Kaz1-ORFB-RF 1130 CG1220-RF 616..961 13..358 1715 99.7 Plus
Kaz1-ORFB-RE 1143 CG1220-RE 629..974 13..358 1715 99.7 Plus
Kaz1-ORFB-RA 562 CG1220-RA 48..393 13..358 1715 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:01:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 217490..217775 38..323 1430 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:01:51 has no hits.

BO14810.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:31 Download gff for BO14810.complete
Subject Subject Range Query Range Percent Splice Strand
Kaz1-ORFB-RF 1..345 17..359 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:17 Download gff for BO14810.complete
Subject Subject Range Query Range Percent Splice Strand
Kaz1-ORFB-RF 613..961 8..358 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:05:52 Download gff for BO14810.complete
Subject Subject Range Query Range Percent Splice Strand
Kaz1-ORFB-RA 52..393 17..360 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:31 Download gff for BO14810.complete
Subject Subject Range Query Range Percent Splice Strand
Kaz1-ORFB-RE 606..954 8..358 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:13:08 Download gff for BO14810.complete
Subject Subject Range Query Range Percent Splice Strand
Kaz1-ORFB-RA 52..393 17..360 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:13:08 Download gff for BO14810.complete
Subject Subject Range Query Range Percent Splice Strand
3L 217421..217442 17..38 100 -> Plus
3L 217491..217775 39..323 100 -> Plus
3L 217855..217889 324..360 94   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:05:52 Download gff for BO14810.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 217421..217442 17..38 100 -> Plus
arm_3L 217491..217775 39..323 100 -> Plus
arm_3L 217855..217889 324..360 94   Plus

BO14810.pep Sequence

Translation from 16 to 376

> BO14810.pep
MDWIKIFVSGLALLLIGMAQCYPQFDSENPWLRPRQPTEPTISPNAGGST
PANAAPPTTQSPRYFACFHSCPATSEYNPICGSDNVNYYNENKFNCALNC
GLNIRKVHKGICQTASFLDH

BO14810.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:47:25
Subject Length Description Subject Range Query Range Score Percent Strand
Kaz1-ORFB-PF 114 CG1220-PF 1..114 1..114 642 100 Plus
Kaz1-ORFB-PE 114 CG1220-PE 1..114 1..114 642 100 Plus
Kaz1-ORFB-PA 114 CG1220-PA 1..114 1..114 642 100 Plus
Kaz1-ORFB-PH 115 CG1220-PH 1..103 1..103 577 99 Plus
CG34454-PA 133 CG34454-PA 3..125 1..113 194 38.9 Plus