Clone BO14815 Report

Search the DGRC for BO14815

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:148
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptCG17324-RB
Protein status:BO14815.pep: Imported from assembly
Sequenced Size:1609

Clone Sequence Records

BO14815.3prime Sequence

885 bp (873 high quality bases) assembled on 2006-06-16

> BO14815.3prime
ATGGTCTAGAAAGCTTGCTTGCGTCTTTGTCTTAGTATCTCTAGAGATTT
TCCCCCGACAAAAAGCTGTTTTGAATATCTTTATGAGCTTCCGCAGGGCG
ACAATCAGTAGAAATAAGATTCCCAGCCAGAACAGGAGAACATCGATGGA
ATTGTAGACGATCCAGTTTATGTGTCTGGCTTCACTTTGGATATGTGGAG
CTCCCCCATACTTTATGACATGCTCAATCCACCAGGTGGCCAATTTGATA
GGGGGAATGGGACGCTGGCGAAATGCTTCGCTGGATCGTCTAACTCTTTC
CGCGAATTTTTTATCAAGTATAATACGAAGTCCTCTGGTTATGTGATTCG
AATCGAAGTCTCTGAAGTCAACGATAACTCCGAAACCTCTTTGTTTCACT
GCGCCTGAGTTGAGAAACTGATCTCCGTAGAAAGGTGTCACCAGCATGGG
AACTCCACAGTGAATCGCCTCCGTGGTGCCCAAAAGTCCGCCATGGGAGA
TAAAAGCCCTGATCTTTGGGTGACACAAAAGATCTCTTTGTGGCAGCCAG
TCGAAAGTGTAGAGGTTCGAGGGCTGTTTATCTTCCAGAGATTCTAAACT
TTTCCAGCGCATTACAAAGTTGTATTCCTTAAGTTGGGAAATGCTTTGGA
AAAGCGCACTTCGCTTGCCCGAAGGAAGTGTATTGCTGTTTACCATGGAG
CCCCAGCTGATATAGATTACTCCATTGGGAGATCGATCCAGAAGATCTAG
CAGGTGTTGTGGAAGTGGTTTTATCGGCCCCACTTGCAGCCCACCCACTT
CAATCACATTCGGAGCATAGGGGCGTGGTCCGGTTAGGGCGTAATGCTGA
TTGATCAGCATCAGACTCGTATTCTTCACGATCTC

BO14815.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:27:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG17324-PA 1578 CG17324-RA 709..1575 885..19 4335 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:47:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG17324-RB 1680 CG17324-RB 786..1652 885..19 4335 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:47:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18821723..18822171 756..308 2245 100 Minus
2L 23513712 2L 18822257..18822545 307..19 1445 100 Minus
2L 23513712 2L 18821086..18821214 885..757 645 100 Minus
Blast to na_te.dros performed on 2015-02-12 03:47:57 has no hits.

BO14815.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:19 Download gff for BO14815.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17324-PA 709..1578 15..885 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:25 Download gff for BO14815.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17324-PA 709..1578 15..885 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:43:02 Download gff for BO14815.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17324-RB 786..1661 10..885 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:51:53 Download gff for BO14815.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17324-RB 786..1661 10..885 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:51:53 Download gff for BO14815.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 18822257..18822554 10..307 98   Minus
2L 18821086..18821214 757..885 100 -> Minus
2L 18821723..18822171 308..756 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:43:02 Download gff for BO14815.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18821086..18821214 757..885 100 -> Minus
arm_2L 18821723..18822171 308..756 100 -> Minus
arm_2L 18822257..18822554 10..307 98   Minus

BO14815.complete Sequence

1609 bp assembled on 2011-06-28

GenBank Submission: KX796603

> BO14815.complete
GAAGTTATCAGTCGACATGAAGTTGCTACCTCTGGCTTTATTAGCCTTTT
TATTAAGACCGAAACCCAATGACGCGGCGCACATTTTGGGCTTGTTTCAA
CATCCCGGAAAGAGCCACTTTGACTTCTTCCGTCCCATGTTCTTGGCCTT
GGCGGAGAGGGGTCACAACATTAGCATGTATAGCTATTTTCCACTGGAGA
AACCAGTGGCCAACTACACGGATTACGTCTTTCAAGGAATGCCCTTGCTC
ACCGATATTGTGGACTTAAGTAACTTTGAATCCGAATGGAAGCCCCTGGG
ACTGCCGTTCAAGGTGCCCACCTACTTTATGCTTCACGATTGGGGTCTGC
GATCCTGTAAGGTGGCCCTGAACTCACCCCTCATCACCCAACTGCTCAAG
TCCCCCATTCGATATGACGTCATACTCCTGGAACACTTCTCCAACGATTG
CATGGCAGCGGTGGCCCACCTATTGAATGCACCTGTAATCGCATTGAGTA
GCTGTGCGATAATGCCGTGGCACTACAAACGCATGGGAAGTCCGTTCATT
AACCCCATTATGCCCATGAATTTCCTGCCCTACACTGATGAGATGAGTCT
GATCGATCGACTGAATAATTTCTTTCATTTCCACACCGTTAATACTCTGT
ACAACATGATTACCCAACCAGCCACCGATGCCCTGATCGCTGAGAGATTT
GGACCCGGTCTGCCGCCCATCAATGAGATCGTGAAGAATACGAGTCTGAT
GCTGATCAATCAGCATTACGCCCTAACCGGACCACGCCCCTATGCTCCGA
ATGTGATTGAAGTGGGTGGGCTGCAAGTGGGGCCGATAAAACCACTTCCA
CAACACCTGCTAGATCTTCTGGATCGATCTCCCAATGGAGTAATCTATAT
CAGCTGGGGCTCCATGGTAAACAGCAATACACTTCCTTCGGGCAAGCGAA
GTGCGCTTTTCCAAAGCATTTCCCAACTTAAGGAATACAACTTTGTAATG
CGCTGGAAAAGTTTAGAATCTCTGGAAGATAAACAGCCCTCGAACCTCTA
CACTTTCGACTGGCTGCCACAAAGAGATCTTTTGTGTCACCCAAAGATCA
GGGCTTTTATCTCCCATGGCGGACTTTTGGGCACCACGGAGGCGATTCAC
TGTGGAGTTCCCATGCTGGTGACACCTTTCTACGGAGATCAGTTTCTCAA
CTCAGGCGCAGTGAAACAAAGAGGTTTCGGAGTTATCGTTGACTTCAGAG
ACTTCGATTCGAATCACATAACCAGAGGACTTCGTATTATACTTGATAAA
AAATTCGCGGAAAGAGTTAGACGATCCAGCGAAGCATTTCGCCAGCGTCC
CATTCCCCCTATCAAATTGGCCACCTGGTGGATTGAGCATGTCATAAAGT
ATGGGGGAGCTCCACATATCCAAAGTGAAGCCAGACACATAAACTGGATC
GTCTACAATTCCATCGATGTTCTCCTGTTCTGGCTGGGAATCTTATTTCT
ACTGATTGTCGCCCTGCGGAAGCTCATAAAGATATTCAAAACAGCTTTTT
GTCGGGGGAAAATCTCTAGAGATACTAAGACAAAGACGCAAGCAAGCTTT
CTAGACCAT

BO14815.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:12:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG17324-RB 1578 CG17324-PB 1..1575 17..1591 7875 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:12:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG17324-RB 1680 CG17324-RB 78..1652 17..1591 7875 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:12:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18821723..18822171 854..1302 2245 100 Plus
2L 23513712 2L 18820570..18820952 272..654 1915 100 Plus
2L 23513712 2L 18822257..18822545 1303..1591 1445 100 Plus
2L 23513712 2L 18820256..18820510 17..271 1275 100 Plus
2L 23513712 2L 18821012..18821214 651..853 1000 99.5 Plus
Blast to na_te.dros performed on 2014-11-26 16:12:05 has no hits.

BO14815.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 12:16:18 Download gff for BO14815.complete
Subject Subject Range Query Range Percent Splice Strand
CG17324-RB 78..1652 17..1593 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:54:47 Download gff for BO14815.complete
Subject Subject Range Query Range Percent Splice Strand
CG17324-RB 78..1652 17..1593 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:13:27 Download gff for BO14815.complete
Subject Subject Range Query Range Percent Splice Strand
CG17324-RB 78..1652 17..1593 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:13:27 Download gff for BO14815.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18821016..18821214 655..853 100 -> Plus
2L 18822257..18822545 1303..1593 99   Plus
2L 18821723..18822171 854..1302 100 -> Plus
2L 18820256..18820510 17..271 100 -> Plus
2L 18820570..18820952 272..654 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:54:47 Download gff for BO14815.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18820256..18820510 17..271 100 -> Plus
arm_2L 18820570..18820952 272..654 100 -> Plus
arm_2L 18821016..18821214 655..853 100 -> Plus
arm_2L 18821723..18822171 854..1302 100 -> Plus
arm_2L 18822257..18822545 1303..1593 99   Plus

BO14815.pep Sequence

Translation from 16 to 1609

> BO14815.pep
MKLLPLALLAFLLRPKPNDAAHILGLFQHPGKSHFDFFRPMFLALAERGH
NISMYSYFPLEKPVANYTDYVFQGMPLLTDIVDLSNFESEWKPLGLPFKV
PTYFMLHDWGLRSCKVALNSPLITQLLKSPIRYDVILLEHFSNDCMAAVA
HLLNAPVIALSSCAIMPWHYKRMGSPFINPIMPMNFLPYTDEMSLIDRLN
NFFHFHTVNTLYNMITQPATDALIAERFGPGLPPINEIVKNTSLMLINQH
YALTGPRPYAPNVIEVGGLQVGPIKPLPQHLLDLLDRSPNGVIYISWGSM
VNSNTLPSGKRSALFQSISQLKEYNFVMRWKSLESLEDKQPSNLYTFDWL
PQRDLLCHPKIRAFISHGGLLGTTEAIHCGVPMLVTPFYGDQFLNSGAVK
QRGFGVIVDFRDFDSNHITRGLRIILDKKFAERVRRSSEAFRQRPIPPIK
LATWWIEHVIKYGGAPHIQSEARHINWIVYNSIDVLLFWLGILFLLIVAL
RKLIKIFKTAFCRGKISRDTKTKTQASFLDH

BO14815.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:50:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG17324-PB 525 CG17324-PB 1..525 1..525 2794 100 Plus
CG17323-PD 519 CG17323-PD 30..519 23..519 1159 43.5 Plus
CG17323-PC 519 CG17323-PC 30..519 23..519 1159 43.5 Plus
CG17323-PE 519 CG17323-PE 30..519 23..519 1159 43.5 Plus
CG17323-PA 519 CG17323-PA 30..519 23..519 1159 43.5 Plus