Clone BO14821 Report

Search the DGRC for BO14821

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:148
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptSirt4-RC
Protein status:BO14821.pep: validated full length
Sequenced Size:970

Clone Sequence Records

BO14821.3prime Sequence

829 bp (820 high quality bases) assembled on 2006-06-16

> BO14821.3prime
ATGGTCTAGAAAGCTTGCACTGACGCTTTTCGAATTGCGAAAGTCGAACA
GTTTGGGTATGACATCGCCGCACTTGGCGGATATCTTGATATCCGCCAGG
TGATCGGCGCGCGTTTCGCCAATATTAACAATGCCCACCGGTAGCTTGAG
GTCCTTGGTCTGCAGGACAACGCGGTAGCCGGAGAAGACCAGGAGACTGG
ACCCGAGGACAAGCAGGCCATCGCTATTGTACACCATGCCGGCAATCTGA
TCCACTCGTGGCCGAGGCACAGAATCTCCGAAGAAGACAATTTCCGGCTT
CAAGTCGCCGCCGCACTGCGTACACTCGGGTATCCGGAAGTTCTCGATGT
ACTCCAGCGGTATCTCTACATCGCCATCGGGCCGGATCATGTCGGGGGCA
TCTTTGAAGGCCGGATTTAGCGACGCCAGTATGCTCTGGAACTCGTGACG
ATCGATCCGGTACTCGCATGACAGGCACTTGACCACATAGCCACTGCCAT
GAACCTCCACAACATTTCGGCTGCCCGCCTTCGTGTGCAGCCGGTCCACG
TTCTGGGTGACCACCGCCTGGACCCGCTCCTCCCGCTCGAATCTGGCCAG
CGCGTGATGCGTGGCATTGGGCTGTGTGGCAGAAAACTTGGGCCAGCCCA
CAAAGTTCCTGGCCCAGTACCGCTTGCGCACCGCCGACGACTTGACGAAC
TCCATGTGCTGGACGGGCTTGTGGTTGGAGCGGGCGTAGAGGCCCACGCC
TTCGGAACGGTAATCGGGAATCCCCGATTCCGTCGAGATGCCAGCGCCCG
TGAGAACCAAAACATTCGGTTTGGACAGG

BO14821.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:28:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG3187-PC 939 Sirt4-RC 29..936 926..19 4540 100 Minus
CG3187-PA 690 Sirt4-RA 1..687 705..19 3435 100 Minus
CG3187-PB 690 Sirt4-RB 1..687 705..19 3435 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:56:22
Subject Length Description Subject Range Query Range Score Percent Strand
Sirt4-RC 1112 CG3187-RC 198..1008 829..19 4055 100 Minus
Sirt4-RB 1253 CG3187-RB 394..1149 774..19 3780 100 Minus
Sirt4-RA 1198 CG3187-RA 340..1094 773..19 3775 100 Minus
Sirt4-RB 1253 CG3187-RB 198..253 829..774 280 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:56:15
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5664732..5665487 19..774 3780 100 Plus
X 23542271 X 5665687..5665743 773..829 285 100 Plus
Blast to na_te.dros performed on 2015-01-31 10:56:19 has no hits.

BO14821.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:25 Download gff for BO14821.3prime
Subject Subject Range Query Range Percent Splice Strand
Sirt4-PC 27..939 15..928 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:33 Download gff for BO14821.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3187-PC 27..939 15..928 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:44:44 Download gff for BO14821.3prime
Subject Subject Range Query Range Percent Splice Strand
Sirt4-RC 198..1011 15..829 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:52:06 Download gff for BO14821.3prime
Subject Subject Range Query Range Percent Splice Strand
Sirt4-RC 198..1011 15..829 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:52:06 Download gff for BO14821.3prime
Subject Subject Range Query Range Percent Splice Strand
X 5664729..5665486 15..773 99 <- Plus
X 5665688..5665743 774..829 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:44:44 Download gff for BO14821.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 5558762..5559519 15..773 99 <- Plus
arm_X 5559721..5559776 774..829 100   Plus

BO14821.5prime Sequence

849 bp (808 high quality bases) assembled on 2006-06-16

> BO14821.5prime
GAAGTTATCAGTCGACATGCGTGTGGGCCAGCTGCTCCGCTTCCGGAGCA
CCAGCTTGCGCAGCTCCACCGCCAGGCAGGAGTACGTGCCGCATCACAAG
CCCGTCGTGGAGGACGACATCAAACGGCTGGAGGACTTTCTCCTGTCCAA
ACCGAATGTTTTGGTTCTCACGGGCGCTGGCATCTCGACGGAATCGGGGA
TTCCCGATTACCGTTCCGAAGGCGTGGGCCTCTACGCCCGCTCCAACCAC
AAGCCCGTCCAGCACATGGAGTTCGTCAAGTCGTCGGCGGTGCGCAAGCG
GTACTGGGCCAGGAACTTTGTGGGCTGGCCCAAGTTTTCTGCCACACAGC
CCAATGCCACGCATCACGCGCTGGCCAGATTCGAGCGGGAGGAGCGGGTC
CAGGCGGTGGTCACCCAGAACGTGGACCGGCTGCACACGAAGGCGGGCAG
CCGAAATGTTGTGGAGGTTCATGGCAGTGGCTATGTGGTCAAGTGCCTGT
CATGCGAGTACCGGATCGATCGTCACGAGTTCCAGAGCATACTGGCGTCG
CTAAATCCGGCCTTCAAAGATGCCCCCGACATGATCCGGCCCGATGGCGA
TGTAGAGATACCGCTGGAGTACATCGAGAACTTCCGGATACCCGAGTGTA
CGCAGTGCGGCGGCGACTTGAAGCCGGAAATTGTCTTCTTCGGAGATTCT
GTGCCTCGGCCACGAGTGGATCAGATTGCCGGCATGGTGTACAATAGCGA
TGGCCTGCTTGTCCTCGGGTCCAGTCTCCTGGTCTTCTCCGGCTACCGCG
TTGTCCTGCAGACCAAAGACCTCAAGCTACCGGGTGGGCATTGTTAATA

BO14821.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:28:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG3187-PC 939 Sirt4-RC 1..817 17..833 4060 99.8 Plus
CG3187-PA 690 Sirt4-RA 1..568 266..833 2815 99.8 Plus
CG3187-PB 690 Sirt4-RB 1..568 266..833 2815 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 02:06:17
Subject Length Description Subject Range Query Range Score Percent Strand
Sirt4-RC 1112 CG3187-RC 73..904 17..849 4125 99.8 Plus
Sirt4-RB 1253 CG3187-RB 394..1045 197..849 3225 99.7 Plus
Sirt4-RA 1198 CG3187-RA 340..990 198..849 3220 99.7 Plus
Sirt4-RB 1253 CG3187-RB 73..253 17..197 905 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 02:06:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5664836..5665487 849..197 3200 99.7 Minus
X 23542271 X 5665687..5665868 198..17 910 100 Minus
Blast to na_te.dros performed on 2015-02-04 02:06:14 has no hits.

BO14821.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:26 Download gff for BO14821.5prime
Subject Subject Range Query Range Percent Splice Strand
Sirt4-PC 1..831 17..848 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:34 Download gff for BO14821.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3187-PC 1..831 17..848 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:42:36 Download gff for BO14821.5prime
Subject Subject Range Query Range Percent Splice Strand
Sirt4-RC 73..903 17..848 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:19:56 Download gff for BO14821.5prime
Subject Subject Range Query Range Percent Splice Strand
Sirt4-RC 73..903 17..848 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:19:56 Download gff for BO14821.5prime
Subject Subject Range Query Range Percent Splice Strand
X 5664837..5665486 198..848 99 <- Minus
X 5665688..5665868 17..197 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:42:36 Download gff for BO14821.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 5558870..5559519 198..848 99 <- Minus
arm_X 5559721..5559901 17..197 100   Minus

BO14821.complete Sequence

970 bp (970 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633253

> BO14821.complete
GAAGTTATCAGTCGACATGCGTGTGGGCCAGCTGCTCCGCTTCCGGAGCA
CCAGCTTGCGCAGCTCCACCGCCAGGCAGGAGTACGTGCCGCATCACAAG
CCCGTCGTGGAGGACGACATCAAACGGCTGGAGGACTTTCTCCTGTCCAA
ACCGAATGTTTTGGTTCTCACGGGCGCTGGCATCTCGACGGAATCGGGGA
TTCCCGATTACCGTTCCGAAGGCGTGGGCCTCTACGCCCGCTCCAACCAC
AAGCCCGTCCAGCACATGGAGTTCGTCAAGTCGTCGGCGGTGCGCAAGCG
GTACTGGGCCAGGAACTTTGTGGGCTGGCCCAAGTTTTCTGCCACACAGC
CCAATGCCACGCATCACGCGCTGGCCAGATTCGAGCGGGAGGAGCGGGTC
CAGGCGGTGGTCACCCAGAACGTGGACCGGCTGCACACGAAGGCGGGCAG
CCGAAATGTTGTGGAGGTTCATGGCAGTGGCTATGTGGTCAAGTGCCTGT
CATGCGAGTACCGGATCGATCGTCACGAGTTCCAGAGCATACTGGCGTCG
CTAAATCCGGCCTTCAAAGATGCCCCCGACATGATCCGGCCCGATGGCGA
TGTAGAGATACCGCTGGAGTACATCGAGAACTTCCGGATACCCGAGTGTA
CGCAGTGCGGCGGCGACTTGAAGCCGGAAATTGTCTTCTTCGGAGATTCT
GTGCCTCGGCCACGAGTGGATCAGATTGCCGGCATGGTGTACAATAGCGA
TGGCCTGCTTGTCCTCGGGTCCAGTCTCCTGGTCTTCTCCGGCTACCGCG
TTGTCCTGCAGACCAAGGACCTCAAGCTACCGGTGGGCATTGTTAATATT
GGCGAAACGCGCGCCGATCACCTGGCGGATATCAAGATATCCGCCAAGTG
CGGCGATGTCATACCCAAACTGTTCGACTTTCGCAATTCGAAAAGCGTCA
GTGCAAGCTTTCTAGACCAT

BO14821.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:03:35
Subject Length Description Subject Range Query Range Score Percent Strand
Sirt4-RC 939 CG3187-PC 1..936 17..952 4680 100 Plus
Sirt4-RB 690 CG3187-PB 1..687 266..952 3435 100 Plus
Sirt4-RA 690 CG3187-PA 1..687 266..952 3435 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:03:36
Subject Length Description Subject Range Query Range Score Percent Strand
Sirt4-RC 1112 CG3187-RC 73..1008 17..952 4680 100 Plus
Sirt4-RB 1253 CG3187-RB 394..1149 197..952 3780 100 Plus
Sirt4-RA 1198 CG3187-RA 340..1094 198..952 3775 100 Plus
Sirt4-RB 1253 CG3187-RB 73..253 17..197 905 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:03:33
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5664732..5665487 952..197 3780 100 Minus
X 23542271 X 5665687..5665868 198..17 910 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:03:34 has no hits.

BO14821.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:33 Download gff for BO14821.complete
Subject Subject Range Query Range Percent Splice Strand
Sirt4-RC 1..939 17..956 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:20 Download gff for BO14821.complete
Subject Subject Range Query Range Percent Splice Strand
Sirt4-RC 102..1040 17..956 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:03:45 Download gff for BO14821.complete
Subject Subject Range Query Range Percent Splice Strand
Sirt4-RC 73..1008 17..954 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:33 Download gff for BO14821.complete
Subject Subject Range Query Range Percent Splice Strand
Sirt4-RC 102..1040 17..956 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:01:56 Download gff for BO14821.complete
Subject Subject Range Query Range Percent Splice Strand
Sirt4-RC 73..1008 17..954 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:01:56 Download gff for BO14821.complete
Subject Subject Range Query Range Percent Splice Strand
X 5664730..5665486 198..954 99 <- Minus
X 5665688..5665868 17..197 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:03:45 Download gff for BO14821.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 5558763..5559519 198..954 99 <- Minus
arm_X 5559721..5559901 17..197 100   Minus

BO14821.pep Sequence

Translation from 16 to 970

> BO14821.pep
MRVGQLLRFRSTSLRSSTARQEYVPHHKPVVEDDIKRLEDFLLSKPNVLV
LTGAGISTESGIPDYRSEGVGLYARSNHKPVQHMEFVKSSAVRKRYWARN
FVGWPKFSATQPNATHHALARFEREERVQAVVTQNVDRLHTKAGSRNVVE
VHGSGYVVKCLSCEYRIDRHEFQSILASLNPAFKDAPDMIRPDGDVEIPL
EYIENFRIPECTQCGGDLKPEIVFFGDSVPRPRVDQIAGMVYNSDGLLVL
GSSLLVFSGYRVVLQTKDLKLPVGIVNIGETRADHLADIKISAKCGDVIP
KLFDFRNSKSVSASFLDH

BO14821.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:47:20
Subject Length Description Subject Range Query Range Score Percent Strand
Sirt4-PC 312 CG3187-PC 1..312 1..312 1620 100 Plus
Sirt4-PB 229 CG3187-PB 1..229 84..312 1195 100 Plus
Sirt4-PA 229 CG3187-PA 1..229 84..312 1195 100 Plus
Sir2-PA 823 CG5216-PA 224..432 48..256 196 29.6 Plus