Clone BO14831 Report

Search the DGRC for BO14831

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:148
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptCG11404-RA
Protein status:BO14831.pep: validated full length
Sequenced Size:601

Clone Sequence Records

BO14831.3prime Sequence

599 bp (599 high quality bases) assembled on 2006-06-16

> BO14831.3prime
ATGGTCTAGAAAGCTTGCGATCTTAATGGTCTGGGCCATTGCCATTCGTT
CCTGAATTTCCTCTGCGGGATGTGGCTGCTGCTCTGGGAGAGCCTCGGAC
TGGATCCGAGGTTTGGGATCTCCGTCGATCTGCATCTGATACATAACGGT
TGCTATAATCAGACTAAAGTGCAGCATGGTCAACAGGAATCCGAAAAGGA
CAAGAGAAGCGTAGTAGCTCCAGCATAGGTCGCTCCACCACAAGTGCCAC
ACCATCTTCAGGTGGAAAGCAGCCAGACACTGGTGAAGGTAGCAGTTCCA
CATGAGAACAATCGCCACCAGCAAGGAGATGTGATAGATCTGAAAAAATG
CGGGGAGAAGCAGTAAGATGTTTACATATAGGTTAAAGTCCCACATGCTT
TCCCCGAACTCCACTCCATAATTGGTTTCCGGTTGTAACGGAGCGAACAT
CTGGCCGATAATAGGAATATTCTGCCAAAGACTTGTCTGGGCTGTAGAAA
CATTTATGATTCGATTGATTTCCATGCTTATGTAACCTACAAGTACGTTG
TACACAAGCAAGTTTAGAGCAGGCATAAAAATCATGTCGACTGATAACT

BO14831.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:28:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG11404-PA 570 CG11404-RA 1..564 585..22 2820 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:35:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG11404-RA 806 CG11404-RA 22..590 587..19 2845 100 Minus
CG11404-RB 797 CG11404-RB 22..581 587..19 2700 98.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:34:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22548803..22549126 342..19 1620 100 Minus
3L 28110227 3L 22548591..22548752 501..340 810 100 Minus
3L 28110227 3L 22548458..22548544 587..501 435 100 Minus
Blast to na_te.dros performed on 2015-02-10 17:34:56 has no hits.

BO14831.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:34 Download gff for BO14831.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11404-PA 1..570 15..585 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:46 Download gff for BO14831.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11404-PA 1..570 15..585 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 23:04:05 Download gff for BO14831.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 11..593 15..597 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:56:36 Download gff for BO14831.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 11..593 15..597 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:56:36 Download gff for BO14831.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 22548447..22548544 501..597 95 -> Minus
3L 22548592..22548752 340..500 100 -> Minus
3L 22548806..22549129 15..339 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 23:04:05 Download gff for BO14831.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22541547..22541644 501..597 95 -> Minus
arm_3L 22541692..22541852 340..500 100 -> Minus
arm_3L 22541906..22542229 15..339 99   Minus

BO14831.5prime Sequence

599 bp (599 high quality bases) assembled on 2006-06-16

> BO14831.5prime
GAAGTTATCAGTCGACATGATTTTTATGCCTGCTCTAAACTTGCTTGTGT
ACAACGTACTTGTAGGTTACATAAGCATGGAAATCAATCGAATCATAAAT
GTTTCTACAGCCCAGACAAGTCTTTGGCAGAATATTCCTATTATCGGCCA
GATGTTCGCTCCGTTACAACCGGAAACCAATTATGGAGTGGAGTTCGGGG
AAAGCATGTGGGACTTTAACCTATATGTAAACATCTTACTGCTTCTCCCC
GCATTTTTTCAGATCTATCACATCTCCTTGCTGGTGGCGATTGTTCTCAT
GTGGAACTGCTACCTTCACCAGTGTCTGGCTGCTTTCCACCTGAAGATGG
TGTGGCACTTGTGGTGGAGCGACCTATGCTGGAGCTACTACGCTTCTCTT
GTCCTTTTCGGATTCCTGTTGACCATGCTGCACTTTAGTCTGATTATAGC
AACCGTTATGTATCAGATGCAGATCGACGGAGATCCCAAACCTCGGATCC
AGTCCGAGGCTCTCCCAGAGCAGCAGCCACATCCCGCAGAGGAAATTCAG
GAACGAATGGCAATGGCCCAGACCATTAAGATCGCAAGCTTTCTAGACC

BO14831.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:28:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG11404-PA 570 CG11404-RA 1..567 17..583 2835 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:58:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG11404-RA 806 CG11404-RA 22..590 15..583 2845 100 Plus
CG11404-RB 797 CG11404-RB 22..581 15..583 2700 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:57:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22548803..22549126 260..583 1620 100 Plus
3L 28110227 3L 22548591..22548752 101..262 810 100 Plus
3L 28110227 3L 22548458..22548544 15..101 435 100 Plus
Blast to na_te.dros performed on 2015-02-11 10:58:02 has no hits.

BO14831.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:35 Download gff for BO14831.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11404-PA 1..570 17..587 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:47 Download gff for BO14831.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11404-PA 1..570 17..587 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:12:30 Download gff for BO14831.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 11..593 5..587 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:32:30 Download gff for BO14831.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 11..593 5..587 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:32:30 Download gff for BO14831.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 22548447..22548544 5..101 95 -> Plus
3L 22548592..22548752 102..262 100 -> Plus
3L 22548806..22549129 263..587 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:12:30 Download gff for BO14831.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22541547..22541644 5..101 95 -> Plus
arm_3L 22541692..22541852 102..262 100 -> Plus
arm_3L 22541906..22542229 263..587 99   Plus

BO14831.complete Sequence

601 bp (601 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633255

> BO14831.complete
GAAGTTATCAGTCGACATGATTTTTATGCCTGCTCTAAACTTGCTTGTGT
ACAACGTACTTGTAGGTTACATAAGCATGGAAATCAATCGAATCATAAAT
GTTTCTACAGCCCAGACAAGTCTTTGGCAGAATATTCCTATTATCGGCCA
GATGTTCGCTCCGTTACAACCGGAAACCAATTATGGAGTGGAGTTCGGGG
AAAGCATGTGGGACTTTAACCTATATGTAAACATCTTACTGCTTCTCCCC
GCATTTTTTCAGATCTATCACATCTCCTTGCTGGTGGCGATTGTTCTCAT
GTGGAACTGCTACCTTCACCAGTGTCTGGCTGCTTTCCACCTGAAGATGG
TGTGGCACTTGTGGTGGAGCGACCTATGCTGGAGCTACTACGCTTCTCTT
GTCCTTTTCGGATTCCTGTTGACCATGCTGCACTTTAGTCTGATTATAGC
AACCGTTATGTATCAGATGCAGATCGACGGAGATCCCAAACCTCGGATCC
AGTCCGAGGCTCTCCCAGAGCAGCAGCCACATCCCGCAGAGGAAATTCAG
GAACGAATGGCAATGGCCCAGACCATTAAGATCGCAAGCTTTCTAGACCA
T

BO14831.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:35:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG11404-RA 570 CG11404-PA 1..567 17..583 2835 100 Plus
CG11404-RB 561 CG11404-PB 1..558 17..583 2665 98.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:35:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG11404-RA 806 CG11404-RA 22..590 15..583 2845 100 Plus
CG11404-RB 797 CG11404-RB 22..581 15..583 2675 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:35:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22548803..22549126 260..583 1620 100 Plus
3L 28110227 3L 22548591..22548752 101..262 810 100 Plus
3L 28110227 3L 22548458..22548544 15..101 435 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:35:31 has no hits.

BO14831.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:34 Download gff for BO14831.complete
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 1..570 17..587 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:22 Download gff for BO14831.complete
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 11..593 5..587 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:27:38 Download gff for BO14831.complete
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 24..590 17..585 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:34 Download gff for BO14831.complete
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 11..593 5..587 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:34:32 Download gff for BO14831.complete
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 24..590 17..585 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:34:32 Download gff for BO14831.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22548460..22548544 17..101 100 -> Plus
3L 22548592..22548752 102..262 100 -> Plus
3L 22548806..22549126 263..585 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:27:38 Download gff for BO14831.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22541560..22541644 17..101 100 -> Plus
arm_3L 22541692..22541852 102..262 100 -> Plus
arm_3L 22541906..22542226 263..585 99   Plus

BO14831.pep Sequence

Translation from 16 to 601

> BO14831.pep
MIFMPALNLLVYNVLVGYISMEINRIINVSTAQTSLWQNIPIIGQMFAPL
QPETNYGVEFGESMWDFNLYVNILLLLPAFFQIYHISLLVAIVLMWNCYL
HQCLAAFHLKMVWHLWWSDLCWSYYASLVLFGFLLTMLHFSLIIATVMYQ
MQIDGDPKPRIQSEALPEQQPHPAEEIQERMAMAQTIKIASFLDH

BO14831.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:47:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG11404-PA 189 CG11404-PA 1..189 1..189 1005 100 Plus
CG11404-PB 186 CG11404-PB 1..186 1..189 978 98.4 Plus