Clone Sequence Records
BO14832.3prime Sequence
464 bp (463 high quality bases) assembled on 2006-06-16
> BO14832.3prime
ATGGTCTAGAAAGCTTGCCTTGCAAATCCGTCGGCGCTTGTGGCGTTCAC
TGGTGGTGACCTTGCATGCCATCCGGCGGTATCTATCCTTTCTATGCTCC
GGGAGCTCGGCCCACGCTTTAGCGGCCTCTGCAATTAATTCCTGCGGCTT
CAAGTCACAGTGCTTCTTTCGGAAGAAACGCACGAAATTCAAATAGGCGT
TGTTAGTGACAGGTCCCTGCTTGCTGCACTTCTGACTCGGTGCACACTTG
ACCTTGGGCCGAGTCGCCTTGGCACAGGCTGCCTTTCGGCGCGGCTTTGC
ACAGGACTTCATTGGCTTACATTTGGGCGGTGCTCTCCTCTTTGGATGAT
TACACATTTCAGTGAGACCTTTAGGACTTTCATCTTTTGCAGAAATGGAA
ATTATGCCATTCCACAGGCTCTTGCACTCATTTACATTATTTGAACTCAT
GTCGACTGATAACT
BO14832.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:28:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4478-PA | 435 | Mst35Bb-RA | 1..432 | 450..19 | 2160 | 100 | Minus |
CG4479-PA | 441 | Mst35Ba-RA | 127..429 | 324..22 | 1215 | 96 | Minus |
CG4479-PA | 441 | Mst35Ba-RA | 1..122 | 450..329 | 560 | 98.3 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 11:26:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst35Bb-RA | 679 | CG4478-RA | 142..573 | 450..19 | 2160 | 100 | Minus |
Mst35Ba-RB | 643 | CG4479-RB | 124..552 | 450..22 | 1890 | 96 | Minus |
Mst35Ba-RA | 683 | CG4479-RA | 164..592 | 450..22 | 1890 | 96 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 11:25:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 14882306..14882687 | 69..450 | 1910 | 100 | Plus |
2L | 23513712 | 2L | 14879237..14879618 | 69..450 | 1655 | 95.5 | Plus |
2L | 23513712 | 2L | 14882207..14882258 | 19..70 | 260 | 100 | Plus |
2L | 23513712 | 2L | 14879141..14879189 | 22..70 | 245 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-06 11:25:56 has no hits.
BO14832.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:36 Download gff for
BO14832.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4478-PA | 1..435 | 15..450 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:48 Download gff for
BO14832.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4478-PA | 1..435 | 15..450 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:51:49 Download gff for
BO14832.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 136..576 | 15..455 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:33:57 Download gff for
BO14832.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 136..576 | 15..455 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:33:57 Download gff for
BO14832.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14882204..14882257 | 15..69 | 96 | <- | Plus |
2L | 14882307..14882693 | 70..455 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:51:49 Download gff for
BO14832.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 14882204..14882257 | 15..69 | 96 | <- | Plus |
arm_2L | 14882307..14882693 | 70..455 | 99 | | Plus |
BO14832.5prime Sequence
464 bp (463 high quality bases) assembled on 2006-06-16
> BO14832.5prime
GAAGTTATCAGTCGACATGAGTTCAAATAATGTAAATGAGTGCAAGAGCC
TGTGGAATGGCATAATTTCCATTTCTGCAAAAGATGAAAGTCCTAAAGGT
CTCACTGAAATGTGTAATCATCCAAAGAGGAGAGCACCGCCCAAATGTAA
GCCAATGAAGTCCTGTGCAAAGCCGCGCCGAAAGGCAGCCTGTGCCAAGG
CGACTCGGCCCAAGGTCAAGTGTGCACCGAGTCAGAAGTGCAGCAAGCAG
GGACCTGTCACTAACAACGCCTATTTGAATTTCGTGCGTTTCTTCCGAAA
GAAGCACTGTGACTTGAAGCCGCAGGAATTAATTGCAGAGGCCGCTAAAG
CGTGGGCCGAGCTCCCGGAGCATAGAAAGGATAGATACCGCCGGATGGCA
TGCAAGGTCACCACCAGTGAACGCCACAAGCGCCGACGGATTTGCAAGGC
AAGCTTTCTAGACC
BO14832.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:28:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4478-PA | 435 | Mst35Bb-RA | 1..432 | 17..448 | 2160 | 100 | Plus |
CG4479-PA | 441 | Mst35Ba-RA | 127..429 | 143..445 | 1215 | 96 | Plus |
CG4479-PA | 441 | Mst35Ba-RA | 1..122 | 17..138 | 560 | 98.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:57:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst35Bb-RA | 679 | CG4478-RA | 142..573 | 17..448 | 2160 | 100 | Plus |
Mst35Ba-RB | 643 | CG4479-RB | 124..552 | 17..445 | 1890 | 96 | Plus |
Mst35Ba-RA | 683 | CG4479-RA | 164..592 | 17..445 | 1890 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:57:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 14882306..14882687 | 398..17 | 1910 | 100 | Minus |
2L | 23513712 | 2L | 14879237..14879618 | 398..17 | 1655 | 95.5 | Minus |
2L | 23513712 | 2L | 14882207..14882258 | 448..397 | 260 | 100 | Minus |
2L | 23513712 | 2L | 14879141..14879189 | 445..397 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 10:57:47 has no hits.
BO14832.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:36 Download gff for
BO14832.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4478-PA | 1..435 | 17..452 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:50 Download gff for
BO14832.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4478-PA | 1..435 | 17..452 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:12:28 Download gff for
BO14832.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 136..576 | 12..452 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:32:05 Download gff for
BO14832.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 136..576 | 12..452 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:32:05 Download gff for
BO14832.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14882204..14882257 | 398..452 | 96 | <- | Minus |
2L | 14882307..14882693 | 12..397 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:12:28 Download gff for
BO14832.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 14882204..14882257 | 398..452 | 96 | <- | Minus |
arm_2L | 14882307..14882693 | 12..397 | 99 | | Minus |
BO14832.complete Sequence
466 bp (466 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633256
> BO14832.complete
GAAGTTATCAGTCGACATGAGTTCAAATAATGTAAATGAGTGCAAGAGCC
TGTGGAATGGCATAATTTCCATTTCTGCAAAAGATGAAAGTCCTAAAGGT
CTCACTGAAATGTGTAATCATCCAAAGAGGAGAGCACCGCCCAAATGTAA
GCCAATGAAGTCCTGTGCAAAGCCGCGCCGAAAGGCAGCCTGTGCCAAGG
CGACTCGGCCCAAGGTCAAGTGTGCACCGAGTCAGAAGTGCAGCAAGCAG
GGACCTGTCACTAACAACGCCTATTTGAATTTCGTGCGTTTCTTCCGAAA
GAAGCACTGTGACTTGAAGCCGCAGGAATTAATTGCAGAGGCCGCTAAAG
CGTGGGCCGAGCTCCCGGAGCATAGAAAGGATAGATACCGCCGGATGGCA
TGCAAGGTCACCACCAGTGAACGCCACAAGCGCCGACGGATTTGCAAGGC
AAGCTTTCTAGACCAT
BO14832.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:09:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst35Bb-RA | 435 | CG4478-PA | 1..432 | 17..448 | 2160 | 100 | Plus |
Mst35Ba-RB | 441 | CG4479-PB | 1..429 | 17..445 | 1890 | 96 | Plus |
Mst35Ba-RA | 441 | CG4479-PA | 1..429 | 17..445 | 1890 | 96 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:09:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst35Bb-RA | 679 | CG4478-RA | 142..573 | 17..448 | 2160 | 100 | Plus |
Mst35Ba-RB | 643 | CG4479-RB | 124..552 | 17..445 | 1890 | 96 | Plus |
Mst35Ba-RA | 683 | CG4479-RA | 164..592 | 17..445 | 1890 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:09:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 14882306..14882687 | 398..17 | 1910 | 100 | Minus |
2L | 23513712 | 2L | 14879237..14879618 | 398..17 | 1655 | 95.5 | Minus |
2L | 23513712 | 2L | 14882207..14882258 | 448..397 | 260 | 100 | Minus |
2L | 23513712 | 2L | 14879141..14879189 | 445..397 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:09:48 has no hits.
BO14832.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:06:24 Download gff for
BO14832.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 1..435 | 17..452 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:21:51 Download gff for
BO14832.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 130..570 | 12..452 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:40:49 Download gff for
BO14832.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 142..573 | 17..450 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:06:24 Download gff for
BO14832.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 130..570 | 12..452 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:46:14 Download gff for
BO14832.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 142..573 | 17..450 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:46:14 Download gff for
BO14832.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14882205..14882257 | 398..450 | 96 | <- | Minus |
2L | 14882307..14882687 | 17..397 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:40:49 Download gff for
BO14832.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 14882205..14882257 | 398..450 | 96 | <- | Minus |
arm_2L | 14882307..14882687 | 17..397 | 100 | | Minus |
BO14832.pep Sequence
Translation from 16 to 466
> BO14832.pep
MSSNNVNECKSLWNGIISISAKDESPKGLTEMCNHPKRRAPPKCKPMKSC
AKPRRKAACAKATRPKVKCAPSQKCSKQGPVTNNAYLNFVRFFRKKHCDL
KPQELIAEAAKAWAELPEHRKDRYRRMACKVTTSERHKRRRICKASFLDH
BO14832.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:48:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst35Bb-PA | 144 | CG4478-PA | 1..144 | 1..144 | 786 | 100 | Plus |
Mst35Ba-PB | 146 | CG4479-PB | 1..144 | 1..144 | 720 | 92.4 | Plus |
Mst35Ba-PA | 146 | CG4479-PA | 1..144 | 1..144 | 720 | 92.4 | Plus |