Clone Sequence Records
BO14848.3prime Sequence
894 bp (778 high quality bases) assembled on 2006-06-16
> BO14848.3prime
ATGGTCTAGAAAGCTTGCACAGTGGCTGCCCGTCGTCGCAACGGCAGCCG
GGGAGCTTTGGACGCTCGGTGTCACCTGGGGAGCCTCCAAGCTGCCAGTG
GTGGCGGAGGAGGGCGAGGTTATCGTCGAGGAGTCTTCGACGGCGGATAG
CACGCTGTTGTCCCCGTAGAAGCGCGGCTCATCGTGCGACTCGCCACCAG
GGGAGGCAGTCTCCTCGTCGGAGTCCTCATCGTTGGAGCTGTCGCCGGCT
GTTGTGTTGAGCTTGTTGCCGGAGGCAGCGCCGGTAGCCGCTGCCGAGTC
CTCGCCAGAGCCAAGGGAACTTGGCACGTGCTTCAAGCGCTCGTAGCAGG
CGTCACAGACGCGCAACGCCTTGGTGCTCTGCTGCGGAAGCAGGAACTTC
TTGGCCGAGCAGCCGGCGCAGACAACAGCGCCGCAGTTGCGGCAGTGATG
CCGGCGCTGGATGAAAGTAAACTGCGTCTTCTTGCAGTGCATGCAGACGC
TGGCGTCGGTGTCGGGCACCCAAACGGCGGCGTGGTTCTCCACCGGCTTC
TTGCCGCTCTTGCGCAGCAGGTCCTCCACGCACTTGTTGATGTGAGCCAT
CCACTCCTGCTTCTCGGTGCTGGTGGCCGCAAACACCACAAACGACTTGG
TGGTGGTGCGGATGTACCAGCCGTTTCTGTACGTCTGGTTGTCGGCAATC
GATTCCAGCGAGACCTCCTCCAGCGGCATGATATGCTGCTTGTTGTACTT
CTTCTTGCCAATCACTATGTTTCCGTACACCAGGATGTCGTTGAACAGGA
AGAACTGGCGCGACTTGGGCCGCTTGCGACACATCTTGGTCAGCACGCCC
TCGCCCACCAAAACGCGACCTTGCATCGCCCGCGGCACGCCCGA
BO14848.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:28:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14782-PA | 951 | CG14782-RA | 73..948 | 894..19 | 4330 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:56:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rush-RB | 2672 | CG14782-RB | 711..1586 | 894..19 | 4350 | 99.8 | Minus |
| rush-RA | 2082 | CG14782-RA | 760..1635 | 894..19 | 4350 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:55:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1479311..1480186 | 894..19 | 4350 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-01-30 18:55:58 has no hits.
BO14848.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:56 Download gff for
BO14848.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14782-PA | 74..951 | 16..893 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:36:18 Download gff for
BO14848.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14782-PA | 74..951 | 16..893 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 19:03:43 Download gff for
BO14848.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rush-RA | 761..1639 | 15..893 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:16:13 Download gff for
BO14848.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rush-RA | 761..1639 | 15..893 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:16:13 Download gff for
BO14848.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1479312..1480184 | 21..893 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 19:03:43 Download gff for
BO14848.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1373345..1374217 | 21..893 | 99 | -> | Minus |
BO14848.5prime Sequence
814 bp (752 high quality bases) assembled on 2006-06-16
> BO14848.5prime
GAAGTTATCAGTCGACATGGTGGACCGTCTGGTCAACTCGGAGGCCAACA
CGCGCCGCATCGCCTCCGTGGAGAACTGCTTCGGGAGCTCGGGCGTGCCG
CTGGCGATGCAAGGTCGCGTTCTGGTGGGCGAGGGCGTGCTGACCAAGAT
GTGTCGCAAGCGGCCCAAGTCGCGCCAGTTCTTCCTGTTCAACGACATCC
TGGTGTACGGAAACATAGTGATTGGCAAGAAGAAGTACAACAAGCAGCAT
ATCATGCCGCTGGAGGAGGTCTCGCTGGAATCGATTGCCGACAACCAGAC
GTACAGAAACGGCTGGTACATCCGCACCACCACCAAGTCGTTTGTGGTGT
TTGCGGCCACCAGCACCGAGAAGCAGGAGTGGATGGCTCACATCAACAAG
TGCGTGGAGGACCTGCTGCGCAAGAGCGGCAAGAAGCCGGTGGAGAACCA
CGCCGCCGTTTGGGTGCCCGACACCGACGCCAGCGTCTGCATGCACTGCA
AGAAGACGCAGTTTACTTTCATCCAGCGCCGGCATCACTGCCGCAACTGC
GGCGCTGTTGTCTGCGCCGGCTGCTCGGCCAAGAAGTTCCTGCTTCCGCA
GCAGAGCACCAAGGCGTTGCGCGTCTGTGACGCCTGCTACGAGCGCTTGA
AGCACGTGCCAAGTTCCCTTGGCTCTGGCGAGGACTCGGCAGCGGCTACC
GGCGCTGCCTCCGGCAACAAGCTCAACACAACAGCCGGCGACAGCTCCAA
CGATGAGGACTCCGACGAGGAGACTGCCTCCCCTGGTGGCGAGTCGCACG
ATGAGCCGCGCTTC
BO14848.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:28:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14782-PA | 951 | CG14782-RA | 1..798 | 17..814 | 3990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:46:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rush-RB | 2672 | CG14782-RB | 634..1436 | 12..814 | 4000 | 99.9 | Plus |
| rush-RA | 2082 | CG14782-RA | 683..1485 | 12..814 | 4000 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:45:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1479234..1480036 | 12..814 | 4000 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-12 00:45:57 has no hits.
BO14848.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:36:57 Download gff for
BO14848.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14782-PA | 1..798 | 17..814 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:36:19 Download gff for
BO14848.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14782-PA | 1..798 | 17..814 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:34:05 Download gff for
BO14848.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rush-RA | 678..1485 | 6..814 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:17:06 Download gff for
BO14848.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rush-RA | 678..1485 | 6..814 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:17:06 Download gff for
BO14848.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1479229..1480036 | 6..814 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:34:05 Download gff for
BO14848.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1373262..1374069 | 6..814 | 99 | | Plus |
BO14848.complete Sequence
982 bp (982 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633259
> BO14848.complete
GAAGTTATCAGTCGACATGGTGGACCGTCTGGTCAACTCGGAGGCCAACA
CGCGCCGCATCGCCTCCGTGGAGAACTGCTTCGGGAGCTCGGGCGTGCCG
CTGGCGATGCAAGGTCGCGTTCTGGTGGGCGAGGGCGTGCTGACCAAGAT
GTGTCGCAAGCGGCCCAAGTCGCGCCAGTTCTTCCTGTTCAACGACATCC
TGGTGTACGGAAACATAGTGATTGGCAAGAAGAAGTACAACAAGCAGCAT
ATCATGCCGCTGGAGGAGGTCTCGCTGGAATCGATTGCCGACAACCAGAC
GTACAGAAACGGCTGGTACATCCGCACCACCACCAAGTCGTTTGTGGTGT
TTGCGGCCACCAGCACCGAGAAGCAGGAGTGGATGGCTCACATCAACAAG
TGCGTGGAGGACCTGCTGCGCAAGAGCGGCAAGAAGCCGGTGGAGAACCA
CGCCGCCGTTTGGGTGCCCGACACCGACGCCAGCGTCTGCATGCACTGCA
AGAAGACGCAGTTTACTTTCATCCAGCGCCGGCATCACTGCCGCAACTGC
GGCGCTGTTGTCTGCGCCGGCTGCTCGGCCAAGAAGTTCCTGCTTCCGCA
GCAGAGCACCAAGGCGTTGCGCGTCTGTGACGCCTGCTACGAGCGCTTGA
AGCACGTGCCAAGTTCCCTTGGCTCTGGCGAGGACTCGGCAGCGGCTACC
GGCGCTGCCTCCGGCAACAAGCTCAACACAACAGCCGGCGACAGCTCCAA
CGATGAGGACTCCGACGAGGAGACTGCCTCCCCTGGTGGCGAGTCGCACG
ATGAGCCGCGCTTCTACGGGGACAACAGCGTGCTATCCGCCGTCGAAGAC
TCCTCGACGATAACCTCGCCCTCCTCCGCCACCACTGGCAGCTTGGAGGC
TCCCCAGGTGACACCGAGCGTCCAAAGCTCCCCGGCTGCCGTTGCGACGA
CGGGCAGCCACTGTGCAAGCTTTCTAGACCAT
BO14848.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:26:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rush-RB | 951 | CG14782-PB | 1..948 | 17..964 | 4740 | 100 | Plus |
| rush-RA | 951 | CG14782-PA | 1..948 | 17..964 | 4740 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:26:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rush-RB | 2672 | CG14782-RB | 634..1586 | 12..964 | 4750 | 99.9 | Plus |
| rush-RA | 2082 | CG14782-RA | 683..1635 | 12..964 | 4750 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:26:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1479234..1480186 | 12..964 | 4750 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:26:46 has no hits.
BO14848.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:22 Download gff for
BO14848.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14782-RA | 1..951 | 17..967 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:04 Download gff for
BO14848.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14782-RA | 678..1639 | 6..968 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:10:36 Download gff for
BO14848.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rush-RA | 688..1635 | 17..966 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:23 Download gff for
BO14848.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14782-RA | 678..1639 | 6..968 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:18:54 Download gff for
BO14848.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rush-RA | 688..1635 | 17..966 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:18:54 Download gff for
BO14848.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1479239..1480186 | 17..966 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:10:36 Download gff for
BO14848.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1373272..1374219 | 17..966 | 99 | | Plus |
BO14848.pep Sequence
Translation from 16 to 982
> BO14848.pep
MVDRLVNSEANTRRIASVENCFGSSGVPLAMQGRVLVGEGVLTKMCRKRP
KSRQFFLFNDILVYGNIVIGKKKYNKQHIMPLEEVSLESIADNQTYRNGW
YIRTTTKSFVVFAATSTEKQEWMAHINKCVEDLLRKSGKKPVENHAAVWV
PDTDASVCMHCKKTQFTFIQRRHHCRNCGAVVCAGCSAKKFLLPQQSTKA
LRVCDACYERLKHVPSSLGSGEDSAAATGAASGNKLNTTAGDSSNDEDSD
EETASPGGESHDEPRFYGDNSVLSAVEDSSTITSPSSATTGSLEAPQVTP
SVQSSPAAVATTGSHCASFLDH
BO14848.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:47:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rush-PB | 316 | CG14782-PB | 1..316 | 1..316 | 1655 | 100 | Plus |
| rush-PA | 316 | CG14782-PA | 1..316 | 1..316 | 1655 | 100 | Plus |
| CG6051-PD | 988 | CG6051-PD | 905..973 | 149..219 | 171 | 50 | Plus |
| CG6051-PC | 989 | CG6051-PC | 906..974 | 149..219 | 171 | 50 | Plus |
| CG6051-PB | 989 | CG6051-PB | 906..974 | 149..219 | 171 | 50 | Plus |
