Clone BO14859 Report

Search the DGRC for BO14859

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:148
Well:59
Vector:pDNR-Dual
Associated Gene/TranscriptAats-his-RA
Protein status:BO14859.pep: validated full length
Sequenced Size:1600

Clone Sequence Records

BO14859.3prime Sequence

903 bp (800 high quality bases) assembled on 2006-06-16

> BO14859.3prime
ATGGTCTAGAAAGCTTGCGGCGGAGGCTTGCTGCCGTCGCCGGATCTCGG
CGGCCAGATCCTCAAGCTTTACGTTGGTCTCCTCGCGCGTGGTCACCTCA
CGCAGTTTGACCAATCCCTGCGCCAGCTCTGCGTCGCCGAGGACAACCAC
CAGAGGAATCTGGTGCTCCTCGCAGTGCTGCAGCTGTACTAACAGCTTAG
GGTTCAGCTTGTAAGAGTGCTCCGCCTTCACGCCCGCATCCCACAGCAGG
TTCAGAACCTTCAGACGCTGCTCGTGGAGACCCTTGTGGGCGGAGGCCAC
GTAAACCTCCACGTCGCTGGTTCGCAACTTCAGACCGCTTGCAGCCGCCC
GCGCCTCCAGAACCGAGAAAATGCGCTCCACGCCAATAGACACGCCCACG
CAGGGCACAGCCTTGCCGCGCGGATCGAACATGCCCACCAGGTTGTCGTA
GCGACCGCCTCCAGCCACGGATCCCACGGTGGCCGGCTCGTTCGCCTGCT
CTCCGTTCTGCTGTGATGTCTTCGCCGGAGATGCCACGGTGGCGGACTCT
CCCTTGAGCACACCTTCGTAGATAACACCGGTGTAGTAGTCCAGGCCACG
GGCCAGACTCAAATCGAAGCTAACTCGCTTATCCAGACCGAATATGGAAC
AGTACTTAAGGAGCTGCTTCATGCCCTCCAGACCCTTTACGGCATTTGGC
ACAGCCTTGAGCTTCTCGTTGGCCAGCAGTTGTTCCACCAGCTCGGCACC
GCCGCTCAGTCGCACGTACTCGCCAATTCGATCCGCTGCTGCCTCGTCCA
GACCCTTCTCATCCACCATCTCCTTGCGCACATCCGCCCAGGGCGACTTA
TCCAACTTATCCACCGCTGAGCAGATGGTGCGGAAGCTATCCGCCGGGAC
TCC

BO14859.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:28:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG6335-PB 1692 Aats-his-RB 805..1689 903..19 4400 99.8 Minus
CG6335-PA 1569 Aats-his-RA 682..1566 903..19 4400 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 11:28:26
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-his-RE 2862 CG6335-RE 1728..2612 903..19 4410 99.9 Minus
Aats-his-RD 2104 CG6335-RD 970..1854 903..19 4410 99.9 Minus
Aats-his-RC 2250 CG6335-RC 1116..2000 903..19 4410 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 11:28:18
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18519313..18519936 848..225 3120 100 Minus
X 23542271 X 18519987..18520195 227..19 1045 100 Minus
X 23542271 X 18519197..18519253 903..847 270 98.2 Minus
Blast to na_te.dros performed on 2015-02-06 11:28:22 has no hits.

BO14859.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:37:07 Download gff for BO14859.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6335-PA 682..1569 18..903 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:36:34 Download gff for BO14859.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6335-PA 682..1569 18..903 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:52:12 Download gff for BO14859.3prime
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RC 1116..2006 12..903 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:34:16 Download gff for BO14859.3prime
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RC 1116..2006 12..903 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:34:16 Download gff for BO14859.3prime
Subject Subject Range Query Range Percent Splice Strand
X 18519197..18519253 847..903 98 -> Minus
X 18519315..18519935 226..846 100 -> Minus
X 18519989..18520201 12..225 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:52:12 Download gff for BO14859.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 18413230..18413286 847..903 98 -> Minus
arm_X 18413348..18413968 226..846 100 -> Minus
arm_X 18414022..18414234 12..225 98   Minus

BO14859.5prime Sequence

863 bp (803 high quality bases) assembled on 2006-06-16

> BO14859.5prime
GAAGTTATCAGTCGACATGAGTGATACGCGTGAGCAGATTCTGGAGCAAA
TCAAAGTGCAAGGCGATCTCGTCCGTCAATTGAAAGCAGCGAAGGAGTCG
AAGGAGAAGATCGATGAGGAGGTCGCCCGCCTACTGGCCCTAAAGGCCAC
TCTTGGCGGAGATGCCGCCCCCACCAATCAGAAGTTCACGCTAAAGACGC
CCAAAGGCACACGGGACTATGGTCCTCAGCAGATGACCCTGCGCCAGGGC
GTCCTGGACAAGATCGTCCAGGTGTTCAAGCGCCACGGCGGCGAAGCCAT
CGATACGCCCGTGTTCGAGCTGAAGGAAGTGCTGACGGGCAAGTACGGCG
AGGACTCAAAGCTGATCTACGACTTGAAGGATCAGGGCGGTGAGATCCTA
TCGATGAGGTATGACTTGACCGTGCCGCTGGCTCGTTACCTGGCGATGAA
CAAGATCTCGAGCATCAAGCGCTACCACATCGCCAAGGTCTATCGACGCG
ACAATCCGGCAATGACCAAGGGTCGCTATCGGGAGTTCTACCAATGTGAC
TTCGACATCGCCGGCACCTACGATCCCATGCTGCCGGATGCCGAGTGCGT
CAAGATTGTGTCGGAGATACTGGACACGCTGGACATTGGAGACTATGTGA
TAAAGCTAAATCACCGCCAGCTTTTGGACGGCATGTTCCAGGCGTGCGGA
GTGCCGGCGGATAGCTTCCGCACCATCTGCTCAGCGGTGGATAAGTTGGA
TAAGTCGCCCTGGGCGGATGTGCGCAAGGAGATGGTGGATGAGAAGGGTC
TGGACGAAGCAGCAGCGGATCGAATTGGCGAGTACGTGCGACTGAGCGGG
CGGTGCCGAGCTG

BO14859.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:28:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG6335-PA 1569 Aats-his-RA 1..833 17..849 4140 99.8 Plus
CG6335-PB 1692 Aats-his-RB 433..956 326..849 2595 99.8 Plus
CG6335-PB 1692 Aats-his-RB 158..376 108..326 1095 100 Plus
CG6335-PB 1692 Aats-his-RB 1..93 17..109 465 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:50:52
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-his-RA 1978 CG6335-RA 163..1008 17..863 4195 99.8 Plus
Aats-his-RE 2862 CG6335-RE 1138..1892 108..863 3740 99.7 Plus
Aats-his-RD 2104 CG6335-RD 380..1134 108..863 3740 99.7 Plus
Aats-his-RE 2862 CG6335-RE 163..255 17..109 465 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:50:48
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18518823..18519253 324..754 2155 100 Plus
X 23542271 X 18517809..18518027 108..326 1095 100 Plus
X 23542271 X 18519313..18519422 753..863 490 98.2 Plus
X 23542271 X 18515590..18515682 17..109 465 100 Plus
Blast to na_te.dros performed on 2015-02-09 22:50:50 has no hits.

BO14859.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:37:08 Download gff for BO14859.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6335-PA 1..846 17..863 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:36:36 Download gff for BO14859.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6335-PA 1..846 17..863 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:23:52 Download gff for BO14859.5prime
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RA 163..1008 17..863 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:49:20 Download gff for BO14859.5prime
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RA 163..1008 17..863 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:49:20 Download gff for BO14859.5prime
Subject Subject Range Query Range Percent Splice Strand
X 18515590..18515682 17..109 100 -> Plus
X 18517811..18518026 110..325 100 -> Plus
X 18518825..18519253 326..754 100 -> Plus
X 18519315..18519422 755..863 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:23:52 Download gff for BO14859.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 18409623..18409715 17..109 100 -> Plus
arm_X 18411844..18412059 110..325 100 -> Plus
arm_X 18412858..18413286 326..754 100 -> Plus
arm_X 18413348..18413455 755..863 98   Plus

BO14859.complete Sequence

1600 bp (1600 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ638734

> BO14859.complete
GAAGTTATCAGTCGACATGAGTGATACGCGTGAGCAGATTCTGGAGCAAA
TCAAAGTGCAAGGCGATCTCGTCCGTCAATTGAAAGCAGCGAAGGAGTCG
AAGGAGAAGATCGATGAGGAGGTCGCCCGCCTACTGGCCCTAAAGGCCAC
TCTTGGCGGAGATGCCGCCCCCACCAATCAGAAGTTCACGCTAAAGACGC
CCAAAGGCACACGGGACTATGGTCCTCAGCAGATGACCCTGCGCCAGGGC
GTCCTGGACAAGATCGTCCAGGTGTTCAAGCGCCACGGCGGCGAAGCCAT
CGATACGCCCGTGTTCGAGCTGAAGGAAGTGCTGACGGGCAAGTACGGCG
AGGACTCAAAGCTGATCTACGACTTGAAGGATCAGGGCGGTGAGATCCTA
TCGATGAGGTATGACTTGACCGTGCCGCTGGCTCGTTACCTGGCGATGAA
CAAGATCTCGAGCATCAAGCGCTACCACATCGCCAAGGTCTATCGACGCG
ACAATCCGGCAATGACCAAGGGTCGCTATCGGGAGTTCTACCAATGTGAC
TTCGACATCGCCGGCACCTACGATCCCATGCTGCCGGATGCCGAGTGCGT
CAAGATTGTGTCGGAGATACTGGACACGCTGGACATTGGAGACTATGTGA
TAAAGCTAAATCACCGCCAGCTTTTGGACGGCATGTTCCAGGCGTGCGGA
GTGCCGGCGGATAGCTTCCGCACCATCTGCTCAGCGGTGGATAAGTTGGA
TAAGTCGCCCTGGGCGGATGTGCGCAAGGAGATGGTGGATGAGAAGGGTC
TGGACGAGGCAGCAGCGGATCGAATTGGCGAGTACGTGCGACTGAGCGGC
GGTGCCGAGCTGGTGGAACAACTGCTGGCCAACGAGAAGCTCAAGGCTGT
GCCAAATGCCGTAAAGGGTCTGGAGGGCATGAAGCAGCTCCTTAAGTACT
GTTCCATATTCGGTCTGGATAAGCGAGTTAGCTTCGATTTGAGTCTGGCC
CGTGGCCTGGACTACTACACCGGTGTTATCTACGAAGGTGTGCTCAAGGG
AGAGTCCGCCACCGTGGCATCTCCGGCGAAGACATCACAGCAGAACGGAG
AGCAGGCGAACGAGCCGGCCACCGTGGGATCCGTGGCTGGAGGCGGTCGC
TACGACAACCTGGTGGGCATGTTCGATCCGCGCGGCAAGGCTGTGCCCTG
CGTGGGCGTGTCTATTGGCGTGGAGCGCATTTTCTCGGTTCTGGAGGCGC
GGGCGGCTGCAAGCGGTCTGAAGTTGCGAACCAGCGACGTGGAGGTTTAC
GTGGCCTCCGCCCACAAGGGTCTCCACGAGCAGCGTCTGAAGGTTCTGAA
CCTGCTGTGGGATGCGGGCGTGAAGGCGGAGCACTCTTACAAGCTGAACC
CTAAGCTGTTAGTACAGCTGCAGCACTGCGAGGAGCACCAGATTCCTCTG
GTGGTTGTCCTCGGCGACGCAGAGCTGGCGCAGGGATTGGTCAAACTGCG
TGAGGTGACCACGCGCGAGGAGACCAACGTAAAGCTTGAGGATCTGGCCG
CCGAGATCCGGCGACGGCAGCAAGCCTCCGCCGCAAGCTTTCTAGACCAT

BO14859.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:59:03
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-his-RA 1569 CG6335-PA 1..1566 17..1582 7830 100 Plus
Aats-his-RE 1665 CG6335-PE 188..1662 108..1582 7375 100 Plus
Aats-his-RD 1695 CG6335-PD 218..1692 108..1582 7375 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:59:04
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-his-RA 1978 CG6335-RA 163..1728 17..1582 7830 100 Plus
Aats-his-RE 2862 CG6335-RE 1138..2612 108..1582 7375 100 Plus
Aats-his-RD 2104 CG6335-RD 380..1854 108..1582 7375 100 Plus
Aats-his-RE 2862 CG6335-RE 163..255 17..109 465 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:59:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18519313..18519936 753..1376 3120 100 Plus
X 23542271 X 18518823..18519253 324..754 2155 100 Plus
X 23542271 X 18517809..18518027 108..326 1095 100 Plus
X 23542271 X 18519987..18520195 1374..1582 1045 100 Plus
X 23542271 X 18515590..18515682 17..109 465 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:59:02 has no hits.

BO14859.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:25 Download gff for BO14859.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RA 1..1569 17..1583 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:07 Download gff for BO14859.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RA 192..1763 17..1589 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:03:52 Download gff for BO14859.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RA 163..1728 17..1584 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:25 Download gff for BO14859.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RA 192..1763 17..1589 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:30:22 Download gff for BO14859.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RA 163..1728 17..1584 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:22 Download gff for BO14859.complete
Subject Subject Range Query Range Percent Splice Strand
X 18515590..18515682 17..109 100 -> Plus
X 18517811..18518026 110..325 100 -> Plus
X 18518825..18519253 326..754 100 -> Plus
X 18519315..18519935 755..1375 100 -> Plus
X 18519989..18520195 1376..1584 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:03:52 Download gff for BO14859.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18409623..18409715 17..109 100 -> Plus
arm_X 18411844..18412059 110..325 100 -> Plus
arm_X 18412858..18413286 326..754 100 -> Plus
arm_X 18413348..18413968 755..1375 100 -> Plus
arm_X 18414022..18414228 1376..1584 99   Plus

BO14859.pep Sequence

Translation from 16 to 1600

> BO14859.pep
MSDTREQILEQIKVQGDLVRQLKAAKESKEKIDEEVARLLALKATLGGDA
APTNQKFTLKTPKGTRDYGPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVF
ELKEVLTGKYGEDSKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSI
KRYHIAKVYRRDNPAMTKGRYREFYQCDFDIAGTYDPMLPDAECVKIVSE
ILDTLDIGDYVIKLNHRQLLDGMFQACGVPADSFRTICSAVDKLDKSPWA
DVRKEMVDEKGLDEAAADRIGEYVRLSGGAELVEQLLANEKLKAVPNAVK
GLEGMKQLLKYCSIFGLDKRVSFDLSLARGLDYYTGVIYEGVLKGESATV
ASPAKTSQQNGEQANEPATVGSVAGGGRYDNLVGMFDPRGKAVPCVGVSI
GVERIFSVLEARAAASGLKLRTSDVEVYVASAHKGLHEQRLKVLNLLWDA
GVKAEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQGLVKLREVTTR
EETNVKLEDLAAEIRRRQQASAASFLDH

BO14859.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:47:46
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-his-PA 522 CG6335-PA 1..522 1..522 2648 100 Plus
Aats-his-PD 564 CG6335-PD 1..564 1..522 2595 92.6 Plus
Aats-his-PE 554 CG6335-PE 39..554 5..522 2507 96.1 Plus
Aats-his-PC 554 CG6335-PC 39..554 5..522 2507 96.1 Plus