Clone BO14903 Report

Search the DGRC for BO14903

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:149
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG10096-RB
Protein status:BO14903.pep: validated full length
Sequenced Size:1540

Clone Sequence Records

BO14903.3prime Sequence

836 bp (722 high quality bases) assembled on 2006-05-29

> BO14903.3prime
ATGGTCTAGAAAGCTTGCTACAAATGAGCCCAGTAGTCGCTTCAAAATTG
ACCACAATATTAGGGCAGCACCGCCACAAAGAGTGAACTGCAGCAGCCGA
TGAAGAAATTCAAACCTTTTATAGATCTTTCGTCCCCTTTCCACTACCTC
CTGTCCTGGTTCCTCCTTGGCGAGATAGATGCGAACTCCGGCCAGTGCCT
GTAGGAAGTAATCATCCCAGTCGACGCTGCTCATATTAAAATCGTAAAGC
TTTTGATCCTCGACAGACATTTTGGCCCACAACTTGCGGGTGTTGACGGT
ATCGAACGACCAGGATGTGATCACAAAGGGTGCCAGAATATCAATGTTCT
TGTGGATCTTGTCGTACAACTTGATCATACGTGGCTTTTTGCCCCATAAA
CGCAAGGCCAGATCAATGGCATAGCCGGGGAGCAGGTGATAAAAGATGGC
CGTGAACCGGAATAGCCAGGGAATGGTGGTGCAATGCAGAAACGGCAACC
ACATCATCTTGGTCAGTGGATACGTGTACCGCAGCCTCGCCGCCTTGTCC
CGAAATCCACCCCAGGTTATCAGGTTATCATTATTTGGCGTAAAATTGTA
GATAGGTGGCTCCGGCGATAGCTTGATACTTGTATCCCGGGCCGTGTTCC
AAGCGCAGGTCAGCACCATATTGACGCAGTAATCCACGGGTACAATTCCA
GCCTGGGCCTTAAGATTAAGCAGTGTGATATGCAGTATTCCGAAGGCTGC
TCCGTAGAGAACTGCAATGGGTCCGTACAGGTTGTCGATCCAGCCGGGCA
TGGGCTCCTTATAGCTGGCAATTATGACACCCGGAC

BO14903.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG10096-PA 1356 CG10096-RA 536..1353 836..19 4090 100 Minus
CG10096-PB 1509 CG10096-RB 689..1506 836..19 4090 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:22:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG10097-RC 4716 CG10097-RC 3673..4490 836..19 4090 100 Minus
CG10097-RD 5233 CG10097-RD 3673..4490 836..19 4090 100 Minus
CG10096-RD 2358 CG10096-RD 798..1615 836..19 4090 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 19:22:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12391082..12391792 114..824 3555 100 Plus
3R 32079331 3R 12390909..12391007 19..117 495 100 Plus
Blast to na_te.dros performed on 2015-02-02 19:22:22 has no hits.

BO14903.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:37:45 Download gff for BO14903.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10096-PB 689..1509 15..836 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:37:27 Download gff for BO14903.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10096-PB 689..1509 15..836 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:52:43 Download gff for BO14903.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10096-RA 3893..4713 15..836 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:08:18 Download gff for BO14903.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10096-RD 798..1618 15..836 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:08:18 Download gff for BO14903.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 12390906..12391005 15..115 98 <- Plus
3R 12391084..12391792 116..824 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:52:43 Download gff for BO14903.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8216628..8216727 15..115 98 <- Plus
arm_3R 8216806..8217514 116..824 100 <- Plus

BO14903.5prime Sequence

799 bp (718 high quality bases) assembled on 2006-05-29

> BO14903.5prime
GAAGTTATCAGTCGACATGGCAACGGATGTGCAATCTTTTTACAAAGACA
AAACTGTCTTCCTAACAGGCGGCAGTGGATTCCTTGGAAAAGTGACCATT
GCGAAGCTGCTCTGCACCACCGAGGTGAAGCGCATCTATGTGCTGCTCCG
TGCCAAACGCGGCCAGGAAATGCGGGAGCGATGCGCCGCATGGGATAAGG
ATCCGGTATTCGGTAATCTAATGAAAACAAATCCCGAGGCTCTGAAGCGC
GTGGTACCTTGTGGTGGCGATTGCCAGGAGCCGGATCTTGGCCTGAGCAA
CAGCGATCGTCAGGTTTTGATAGATGAGGTGCAGATTGTTATCCACACGG
CGGCCACTGTGCGTTTTGTGGAGCCGCTGCACATCGCCCTGGCTGTTAAC
ACCCGAGCCACCCGACTCATGATTCAACTGGCCAAGGAGATGTCCCACTT
GGAGTCCTTTGTCCATGTGTCCACCGCGTACTCAAACTGCGTGGTGGAGC
ACGTAAGTGAACGCTTCTATCCGGAGCACTTGACCTGCCCTGCCGAAAAG
ATCCTAGAGCTGCTGGAAAGCATAAGTCCTGAGCTATTGGATAAAATGGC
ACCGGCGCTGATGGGCAAGTATCCCAATACGTATACGTATACCAAGGCTC
TGACGGAGCAGGTGATCCAGAAGGAGGCGAAAGATTTGCCGCTTAGCATT
TTTCGTCCGGGTGTCATAATTGCCAGCTATAAGGAGCCCATGCCCGGCTG
GATCGACAACCTGTACGGACCCATTGCAGTTCTCTACGGAGCACCCTTC

BO14903.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG10096-PB 1509 CG10096-RB 1..783 17..799 3890 99.8 Plus
CG10096-PA 1356 CG10096-RA 1..630 170..799 3125 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:49:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG10096-RD 2358 CG10096-RD 110..892 17..799 3900 99.9 Plus
CG10096-RB 1841 CG10096-RB 110..892 17..799 3900 99.9 Plus
CG10097-RC 4716 CG10097-RC 3059..3767 91..799 3530 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:49:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12391848..12392359 716..205 2560 100 Minus
3R 32079331 3R 12392456..12392573 208..91 590 100 Minus
3R 32079331 3R 12391710..12391792 799..717 400 98.8 Minus
3R 32079331 3R 12392827..12392902 92..17 380 100 Minus
3R 32079331 3R 16618397..16618628 326..557 305 75.4 Plus
3R 32079331 3R 16615774..16615940 326..492 250 76.6 Plus
2L 23513712 2L 8520272..8520553 396..677 240 72.3 Plus
Blast to na_te.dros performed on 2015-02-09 22:49:48 has no hits.

BO14903.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:37:46 Download gff for BO14903.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10096-PB 1..783 17..799 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:37:29 Download gff for BO14903.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10096-PB 1..783 17..799 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:23:45 Download gff for BO14903.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10096-RB 102..892 9..799 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:49:11 Download gff for BO14903.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10096-RB 102..892 9..799 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:49:11 Download gff for BO14903.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 12391710..12391792 717..799 98 <- Minus
3R 12391848..12392358 206..716 100 <- Minus
3R 12392459..12392571 93..205 100 <- Minus
3R 12392827..12392910 9..92 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:23:45 Download gff for BO14903.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8217432..8217514 717..799 98 <- Minus
arm_3R 8217570..8218080 206..716 100 <- Minus
arm_3R 8218181..8218293 93..205 100 <- Minus
arm_3R 8218549..8218632 9..92 96   Minus

BO14903.complete Sequence

1540 bp assembled on 2007-07-13

GenBank Submission: FJ633270

> BO14903.complete
GAAGTTATCAGTCGACATGGCAACGGATGTGCAATCTTTTTACAAAGACA
AAACTGTCTTCCTAACAGGCGGCAGTGGATTCCTTGGAAAAGTGACCATT
GCGAAGCTGCTCTGCACCACCGAGGTGAAGCGCATCTATGTGCTGCTCCG
TGCCAAACGCGGCCAGGAAATGCGGGAGCGATGCGCCGCATGGGATAAGG
ATCCGGTATTCGGTAATCTAATGAAAACAAATCCCGAGGCTCTGAAGCGC
GTGGTACCTTGTGGTGGCGATTGCCAGGAGCCGGATCTTGGCCTGAGCAA
CAGCGATCGTCAGGTTTTGATAGATGAGGTGCAGATTGTTATCCACACGG
CGGCCACTGTGCGTTTTGTGGAGCCGCTGCACATCGCCCTGGCTGTTAAC
ACCCGAGCCACCCGACTCATGATTCAACTGGCCAAGGAGATGTCCCACTT
GGAGTCCTTTGTCCATGTGTCCACCGCGTACTCAAACTGCGTGGTGGAGC
ACGTAAGTGAACGCTTCTATCCGGAGCACTTGACCTGCCCTGCCGAAAAG
ATCCTAGAGCTGCTGGAAAGCATAAGTCCTGAGCTATTGGATAAAATGGC
ACCGGCGCTGATGGGCAAGTATCCCAATACGTATACGTATACCAAGGCTC
TGACGGAGCAGGTGATCCAGAAGGAGGCGAAAGATTTGCCGCTTAGCATT
TTTCGTCCGGGTGTCATAATTGCCAGCTATAAGGAGCCCATGCCCGGCTG
GATCGACAACCTGTACGGACCCATTGCAGTTCTCTACGGAGCAGCCTTCG
GAATACTGCATATCACACTGCTTAATCTTAAGGCCCAGGCTGGAATTGTA
CCCGTGGATTACTGCGTCAATATGGTGCTGACCTGCGCTTGGAACACGGC
CCGGGATACAAGTATCAAGCTATCGCCGGAGCCACCTATCTACAATTTTA
CGCCAAATAATGATAACCTGATAACCTGGGGTGGATTTCGGGACAAGGCG
GCGAGGCTGCGGTACACGTATCCACTGACCAAGATGATGTGGTTGCCGTT
TCTGCATTGCACCACCATTCCCTGGCTATTCCGGTTCACGGCCATCTTTT
ATCACCTGCTCCCCGGCTATGCCATTGATCTGGCCTTGCGTTTATGGGGC
AAAAAGCCACGTATGATCAAGTTGTACGACAAGATCCACAAGAACATTGA
TATTCTGGCACCCTTTGTGATCACATCCTGGTCGTTCGATACCGTCAACA
CCCGCAAGTTGTGGGCCAAAATGTCTGTCGAGGATCAAAAGCTTTACGAT
TTTAATATGAGCAGCGTCGACTGGGATGATTACTTCCTACAGGCACTGGC
CGGAGTTCGCATCTATCTCGCCAAGGAGGAACCAGGACAGGAGGTAGTGG
AAAGGGGACGAAAGATCTATAAAAGGTTTGAATTTCTTCATCGGCTGCTG
CAGTTCACTCTTTGTGGCGGTGCTGCCCTAATATTGTGGTCAATTTTGAA
GCGACTACTGGGCTCATTTGTAGCAAGCTTTCTAGACCAT

BO14903.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:32:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG10096-RD 1509 CG10096-PD 1..1506 17..1522 7530 100 Plus
CG10096-RB 1509 CG10096-PB 1..1506 17..1522 7530 100 Plus
CG10096-RC 1356 CG10096-PC 1..1353 170..1522 6765 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:32:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG10096-RD 2358 CG10096-RD 110..1615 17..1522 7530 100 Plus
CG10096-RB 1841 CG10096-RB 110..1615 17..1522 7530 100 Plus
CG10097-RC 4716 CG10097-RC 3059..4490 91..1522 7160 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:32:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12391082..12391792 1427..717 3555 100 Minus
3R 32079331 3R 12391848..12392359 716..205 2560 100 Minus
3R 32079331 3R 12392456..12392573 208..91 590 100 Minus
3R 32079331 3R 12390909..12391007 1522..1424 495 100 Minus
3R 32079331 3R 12392827..12392902 92..17 380 100 Minus
3R 32079331 3R 16618397..16618628 326..557 305 75.4 Plus
3R 32079331 3R 16615774..16615940 326..492 250 76.6 Plus
2L 23513712 2L 8520272..8520553 396..677 240 72.3 Plus
Blast to na_te.dros performed on 2014-11-27 15:32:57 has no hits.

BO14903.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:07:46 Download gff for BO14903.complete
Subject Subject Range Query Range Percent Splice Strand
CG10096-RB 1..1509 17..1526 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:24:07 Download gff for BO14903.complete
Subject Subject Range Query Range Percent Splice Strand
CG10096-RB 102..1618 9..1526 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:50:57 Download gff for BO14903.complete
Subject Subject Range Query Range Percent Splice Strand
CG10096-RB 110..1615 17..1524 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:07:47 Download gff for BO14903.complete
Subject Subject Range Query Range Percent Splice Strand
CG10096-RB 102..1618 9..1526 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:10:33 Download gff for BO14903.complete
Subject Subject Range Query Range Percent Splice Strand
CG10096-RB 110..1615 17..1524 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:10:33 Download gff for BO14903.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12390907..12391005 1426..1524 97 <- Minus
3R 12391084..12391792 717..1425 100 <- Minus
3R 12391848..12392358 206..716 100 <- Minus
3R 12392459..12392571 93..205 100 <- Minus
3R 12392827..12392902 17..92 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:50:57 Download gff for BO14903.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8216629..8216727 1426..1524 97 <- Minus
arm_3R 8216806..8217514 717..1425 100 <- Minus
arm_3R 8217570..8218080 206..716 100 <- Minus
arm_3R 8218181..8218293 93..205 100 <- Minus
arm_3R 8218549..8218624 17..92 100   Minus

BO14903.pep Sequence

Translation from 16 to 1540

> BO14903.pep
MATDVQSFYKDKTVFLTGGSGFLGKVTIAKLLCTTEVKRIYVLLRAKRGQ
EMRERCAAWDKDPVFGNLMKTNPEALKRVVPCGGDCQEPDLGLSNSDRQV
LIDEVQIVIHTAATVRFVEPLHIALAVNTRATRLMIQLAKEMSHLESFVH
VSTAYSNCVVEHVSERFYPEHLTCPAEKILELLESISPELLDKMAPALMG
KYPNTYTYTKALTEQVIQKEAKDLPLSIFRPGVIIASYKEPMPGWIDNLY
GPIAVLYGAAFGILHITLLNLKAQAGIVPVDYCVNMVLTCAWNTARDTSI
KLSPEPPIYNFTPNNDNLITWGGFRDKAARLRYTYPLTKMMWLPFLHCTT
IPWLFRFTAIFYHLLPGYAIDLALRLWGKKPRMIKLYDKIHKNIDILAPF
VITSWSFDTVNTRKLWAKMSVEDQKLYDFNMSSVDWDDYFLQALAGVRIY
LAKEEPGQEVVERGRKIYKRFEFLHRLLQFTLCGGAALILWSILKRLLGS
FVASFLDH

BO14903.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:10:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG10096-PD 502 CG10096-PD 1..502 1..502 2647 100 Plus
CG10096-PB 502 CG10096-PB 1..502 1..502 2647 100 Plus
CG10096-PC 451 CG10096-PC 1..451 52..502 2392 100 Plus
CG10096-PA 451 CG10096-PA 1..451 52..502 2392 100 Plus
CG17562-PA 499 CG17562-PA 1..499 1..498 1481 56.5 Plus