Clone BO14904 Report

Search the DGRC for BO14904

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:149
Well:4
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO14904.pep: validated full length
Sequenced Size:517

Clone Sequence Records

BO14904.3prime Sequence

515 bp (514 high quality bases) assembled on 2006-05-29

> BO14904.3prime
ATGGTCTAGAAAGCTTGCGTAATGGGGCTCCTTGCCGAAAAAGGAGAAGG
TCTCGTTGCAGCGAATCTCGTAGCAGTCCGGAAAGGATGTGAAGTGCCTC
GATAAGCGCAGATCGAATATGAATTCACAGTACGGATAAATTGGCGGAAA
CCAGAGAAAGCAGCGATATGTGCAGAGTATGCCAAAGGGTCGCTTAAATT
CTCCATCTGGCGTTTGGATCGAGCCGGAATTGTGCTTTTTCCAGCATTGC
GATGCCCAGCTTCCATGGTTGTAATCACATAAACAGCAGAGGATTAACAG
CAGAACAAATGCGATTGTTGTGGTGCTTTTGCGAGTGTGTATTGCAGTTA
TGGTTGCCGCCGTAGAATTTGTGGTTCTCGTTTCTGTTATCGATTTGGCC
ATTGCACAACAATCGTAAACACAACCGCCGCCGCCAAAATCAGAATCGAA
TTCTGGGCCAGAATTTGTAGATAAATTTGATTCGGAACCTGAGCCTGCCA
TGTCGACTGATAACT

BO14904.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG1545-PA 486 CG1545-RA 1..483 501..19 2415 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:00:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG1545-RB 717 CG1545-RB 98..582 503..19 2425 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:00:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11059279..11059522 260..503 1220 100 Plus
X 23542271 X 11057680..11057800 19..139 605 100 Plus
X 23542271 X 11058365..11058485 140..260 605 100 Plus
Blast to na_te.dros performed on 2015-02-10 16:00:07 has no hits.

BO14904.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:37:47 Download gff for BO14904.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1545-PA 1..486 16..501 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:37:31 Download gff for BO14904.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1545-PA 1..486 16..501 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:38:00 Download gff for BO14904.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1545-RB 98..588 12..503 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:53:14 Download gff for BO14904.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1545-RB 98..588 12..503 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:53:14 Download gff for BO14904.3prime
Subject Subject Range Query Range Percent Splice Strand
X 11057674..11057800 12..139 96 <- Plus
X 11058365..11058485 140..260 100 <- Plus
X 11059280..11059522 261..503 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:38:00 Download gff for BO14904.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10951707..10951833 12..139 96 <- Plus
arm_X 10952398..10952518 140..260 100 <- Plus
arm_X 10953313..10953555 261..503 100   Plus

BO14904.5prime Sequence

515 bp (514 high quality bases) assembled on 2006-05-29

> BO14904.5prime
GAAGTTATCAGTCGACATGGCAGGCTCAGGTTCCGAATCAAATTTATCTA
CAAATTCTGGCCCAGAATTCGATTCTGATTTTGGCGGCGGCGGTTGTGTT
TACGATTGTTGTGCAATGGCCAAATCGATAACAGAAACGAGAACCACAAA
TTCTACGGCGGCAACCATAACTGCAATACACACTCGCAAAAGCACCACAA
CAATCGCATTTGTTCTGCTGTTAATCCTCTGCTGTTTATGTGATTACAAC
CATGGAAGCTGGGCATCGCAATGCTGGAAAAAGCACAATTCCGGCTCGAT
CCAAACGCCAGATGGAGAATTTAAGCGACCCTTTGGCATACTCTGCACAT
ATCGCTGCTTTCTCTGGTTTCCGCCAATTTATCCGTACTGTGAATTCATA
TTCGATCTGCGCTTATCGAGGCACTTCACATCCTTTCCGGACTGCTACGA
GATTCGCTGCAACGAGACCTTCTCCTTTTTCGGCAAGGAGCCCCATTACG
CAAGCTTTCTAGACC

BO14904.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG1545-PA 486 CG1545-RA 1..483 17..499 2415 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:01:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG1545-RB 717 CG1545-RB 98..582 15..499 2425 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 11:01:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11059279..11059522 258..15 1220 100 Minus
X 23542271 X 11057680..11057800 499..379 605 100 Minus
X 23542271 X 11058365..11058485 378..258 605 100 Minus
Blast to na_te.dros performed on 2015-02-09 11:01:15 has no hits.

BO14904.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:37:48 Download gff for BO14904.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1545-PA 1..486 17..502 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:37:32 Download gff for BO14904.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1545-PA 1..486 17..502 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 16:40:16 Download gff for BO14904.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1545-RB 98..588 15..506 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:41:33 Download gff for BO14904.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1545-RB 98..588 15..506 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 11:41:33 Download gff for BO14904.5prime
Subject Subject Range Query Range Percent Splice Strand
X 11057674..11057800 379..506 96 <- Minus
X 11058365..11058485 258..378 100 <- Minus
X 11059280..11059522 15..257 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 16:40:16 Download gff for BO14904.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10951707..10951833 379..506 96 <- Minus
arm_X 10952398..10952518 258..378 100 <- Minus
arm_X 10953313..10953555 15..257 100   Minus

BO14904.complete Sequence

517 bp (517 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633271

> BO14904.complete
GAAGTTATCAGTCGACATGGCAGGCTCAGGTTCCGAATCAAATTTATCTA
CAAATTCTGGCCCAGAATTCGATTCTGATTTTGGCGGCGGCGGTTGTGTT
TACGATTGTTGTGCAATGGCCAAATCGATAACAGAAACGAGAACCACAAA
TTCTACGGCGGCAACCATAACTGCAATACACACTCGCAAAAGCACCACAA
CAATCGCATTTGTTCTGCTGTTAATCCTCTGCTGTTTATGTGATTACAAC
CATGGAAGCTGGGCATCGCAATGCTGGAAAAAGCACAATTCCGGCTCGAT
CCAAACGCCAGATGGAGAATTTAAGCGACCCTTTGGCATACTCTGCACAT
ATCGCTGCTTTCTCTGGTTTCCGCCAATTTATCCGTACTGTGAATTCATA
TTCGATCTGCGCTTATCGAGGCACTTCACATCCTTTCCGGACTGCTACGA
GATTCGCTGCAACGAGACCTTCTCCTTTTTCGGCAAGGAGCCCCATTACG
CAAGCTTTCTAGACCAT

BO14904.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:12:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG1545-RB 387 CG1545-PB 1..384 116..499 1920 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:12:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG1545-RB 717 CG1545-RB 98..582 15..499 2425 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:12:28
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11059279..11059522 258..15 1220 100 Minus
X 23542271 X 11057680..11057800 499..379 605 100 Minus
X 23542271 X 11058365..11058485 378..258 605 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:12:29 has no hits.

BO14904.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:07:04 Download gff for BO14904.complete
Subject Subject Range Query Range Percent Splice Strand
CG1545-RB 1..387 116..502 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:22:52 Download gff for BO14904.complete
Subject Subject Range Query Range Percent Splice Strand
CG1545-RB 98..588 15..506 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:49:42 Download gff for BO14904.complete
Subject Subject Range Query Range Percent Splice Strand
CG1545-RB 100..582 17..501 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:07:04 Download gff for BO14904.complete
Subject Subject Range Query Range Percent Splice Strand
CG1545-RB 98..588 15..506 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:08:36 Download gff for BO14904.complete
Subject Subject Range Query Range Percent Splice Strand
CG1545-RB 100..582 17..501 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:08:36 Download gff for BO14904.complete
Subject Subject Range Query Range Percent Splice Strand
X 11057676..11057800 379..501 98 <- Minus
X 11058365..11058485 258..378 100 <- Minus
X 11059280..11059520 17..257 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:49:42 Download gff for BO14904.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10951709..10951833 379..501 98 <- Minus
arm_X 10952398..10952518 258..378 100 <- Minus
arm_X 10953313..10953553 17..257 100   Minus

BO14904.pep Sequence

Translation from 16 to 517

> BO14904.pep
MAGSGSESNLSTNSGPEFDSDFGGGGCVYDCCAMAKSITETRTTNSTAAT
ITAIHTRKSTTTIAFVLLLILCCLCDYNHGSWASQCWKKHNSGSIQTPDG
EFKRPFGILCTYRCFLWFPPIYPYCEFIFDLRLSRHFTSFPDCYEIRCNE
TFSFFGKEPHYASFLDH

BO14904.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:48:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG1545-PB 128 CG1545-PB 1..128 34..161 724 100 Plus
CG1537-PA 135 CG1537-PA 59..128 84..148 148 37.1 Plus