Clone BO14917 Report

Search the DGRC for BO14917

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:149
Well:17
Vector:pDNR-Dual
Associated Gene/TranscriptCG3104-RA
Protein status:BO14917.pep: validated full length
Sequenced Size:997

Clone Sequence Records

BO14917.3prime Sequence

819 bp (736 high quality bases) assembled on 2006-05-29

> BO14917.3prime
ATGGTCTAGAAAGCTTGCCGCCGACATCGTCTTGACCGTGGACGACACTC
CGGACGTGGCCATTGCCTTGGCGCTGCGCGCCACCATAGTCCGTATGCGT
TCCTGGAGATAATCACAGATGGAGGTGTACTTTTGCTGGTGCGCCAACTG
CAGGGCCGTCAGACCATCGTGGTTCTTCAGCAGGACATCGCTGCCGGCGG
CCACCAGCTGCTTGCAGACGGTCATGTGGCCAAACATGGCGGCGGCATGC
AGTGCGGACTCTCCATTGGGCAGCTGGCCGAGATTGGGTCGGTATTTGAG
CAGCACGGTGATTACGGCGGCATGGCCCTTGTGAGCCGCCTTGAAGAGGG
GCGTGGCGCCGTCGCAACGCACGGTGTCCACATTGGCGCCGTTCTGGAGC
AGCACCTTGCATATGTGATCCTGTCCCATCTGGGCTGCTATCCACAGGGG
CGTGGCGCCGTCTATCCGCTTGATATCGATCTCGGCACCAGCCTGAATCA
GCAGCGACAGAACCGTGCGATGGCCATTTTGGGCGGAGATAAAAACCGGC
GTGGCTCGATCCTTCATGTGCGCATTGACATTCGCTCCGCAGTCCAAGAG
CTCGCGAACGATCTTCACGTGACCACCCTGGCAGGCCACAAAAAGGGGCG
TGCCGCCATCCGCGGAGGGCGTGTCCACGCTGGCGCCCGCCTTTATCAGA
ATCTTCACCACGTCCAGGTGGCCGCCTTGGGCGGCGAAGAAAAGGGGCGT
GGTGCCCGTTAGGCGACGCGAGTTTGGATCGGCTCCCTGATCGAGCAGCT
CCATCACGCAGTAGGTGTG

BO14917.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG3104-PA 966 CG3104-RA 163..963 819..19 4005 100 Minus
CG3104-PB 966 CG3104-RB 163..963 819..19 4005 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:06:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG3104-RC 2395 CG3104-RC 1092..1892 819..19 4005 100 Minus
CG3104-RB 1933 CG3104-RB 630..1430 819..19 4005 100 Minus
CG3104-RA 2213 CG3104-RA 667..1467 819..19 4005 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 19:06:38
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2849735..2850279 19..563 2725 100 Plus
2L 23513712 2L 2850334..2850592 561..819 1295 100 Plus
Blast to na_te.dros performed on 2015-02-02 19:06:42 has no hits.

BO14917.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:38:08 Download gff for BO14917.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3104-PA 163..966 15..819 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:38:01 Download gff for BO14917.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3104-PB 163..966 15..819 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:51:30 Download gff for BO14917.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3104-RA 667..1471 14..819 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:06:22 Download gff for BO14917.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3104-RA 667..1471 14..819 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:06:22 Download gff for BO14917.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 2849731..2850277 14..561 99 <- Plus
2L 2850335..2850592 562..819 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:51:30 Download gff for BO14917.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2849731..2850277 14..561 99 <- Plus
arm_2L 2850335..2850592 562..819 100   Plus

BO14917.5prime Sequence

900 bp (825 high quality bases) assembled on 2006-05-29

> BO14917.5prime
GAAGTTATCAGTCGACATGTCGCTTAAGAAGGAGACGCCCTCGGATGTGC
AACTGCACATGGCAGCGATGAGGGGAGATGAGGTGGCTCTTCTTCGCGTT
CTGGACAGTGGCAAAGTGCATGTCGACTGCAAGGATGAGGATGGAACCAC
CCCACTGATTTTGGCTGCTGCCGGAGGTCACACCTACTGCGTGATGGAGC
TGCTCGATCAGGGAGCCGATCCAAACTCGCGTCGCCTAACGGGCACCACG
CCCCTTTTCTTCGCCGCCCAAGGCGGCCACCTGGACGTGGTGAAGATTCT
GATAAAGGCGGGCGCCAGCGTGGACACGCCCTCCGCGGATGGCGGCACGC
CCCTTTTTGTGGCCTGCCAGGGTGGTCACGTGAAGATCGTTCGCGAGCTC
TTGGACTGCGGAGCGAATGTCAATGCGCACATGAAGGATCGAGCCACGCC
GGTTTTTATCTCCGCCCAAAATGGCCATCGCACGGTTCTGTCGCTGCTGA
TTCAGGCTGGTGCCGAGATCGATATCAAGCGGATAGACGGCGCCACGCCC
CTGTGGATAGCAGCCCAGATGGGACAGGATCACATATGCAAGGTGCTGCT
CCAGAACGGCGCCAATGTGGACACCGTGCGTTGCGACGGCGCCACGCCCC
TCTTCAAGGCGGCTCACAAGGGCCATGCCGCCGTAATCACCGTGCTGCTC
AAATACCGACCCAATCTCGGCCAGCTGCCCAATGGAGAGTCCGCACTGCA
TGCCGCCGCCATGTTTGGCCACATGACCGTCTGCAAGCAGCTGGTGGCCG
CCGGCAGCGATGTCCTGCTGAAGAACCACGATGGTCTGACGGCCCTGCAG
TTGGCGCACCAGCAAAAGTACACCTCCATCTGTGATTATCTCCAGGAACG

BO14917.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG3104-PA 966 CG3104-RA 1..884 17..900 4420 100 Plus
CG3104-PB 966 CG3104-RB 1..884 17..900 4420 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 02:03:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG3104-RC 2395 CG3104-RC 929..1813 16..900 4425 100 Plus
CG3104-RB 1933 CG3104-RB 467..1351 16..900 4425 100 Plus
CG3104-RA 2213 CG3104-RA 504..1388 16..900 4425 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 02:03:38
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2849814..2850279 900..435 2330 100 Minus
2L 23513712 2L 2850334..2850633 437..138 1500 100 Minus
2L 23513712 2L 2852146..2852259 140..27 570 100 Minus
Blast to na_te.dros performed on 2015-02-04 02:03:42 has no hits.

BO14917.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:38:09 Download gff for BO14917.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3104-PA 1..884 17..900 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:38:03 Download gff for BO14917.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3104-PB 1..884 17..900 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:42:13 Download gff for BO14917.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3104-RA 500..1388 9..900 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:19:32 Download gff for BO14917.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3104-RA 500..1388 9..900 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:19:32 Download gff for BO14917.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 2849814..2850277 437..900 100 <- Minus
2L 2850335..2850631 140..436 100 <- Minus
2L 2852147..2852268 18..139 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:42:13 Download gff for BO14917.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2849814..2850277 437..900 100 <- Minus
arm_2L 2850335..2850631 140..436 100 <- Minus
arm_2L 2852147..2852268 18..139 96   Minus

BO14917.complete Sequence

997 bp assembled on 2007-10-17

GenBank Submission: FJ633275

> BO14917.complete
GAAGTTATCAGTCGACATGTCGCTTAAGAAGGAGACGCCCTCGGATGTGC
AACTGCACATGGCAGCGATGAGGGGAGATGAGGTGGCTCTTCTTCGCGTT
CTGGACAGTGGCAAAGTGCATGTCGACTGCAAGGATGAGGATGGAACCAC
CCCACTGATTTTGGCTGCTGCCGGAGGTCACACCTACTGCGTGATGGAGC
TGCTCGATCAGGGAGCCGATCCAAACTCGCGTCGCCTAACGGGCACCACG
CCCCTTTTCTTCGCCGCCCAAGGCGGCCACCTGGACGTGGTGAAGATTCT
GATAAAGGCGGGCGCCAGCGTGGACACGCCCTCCGCGGATGGCGGCACGC
CCCTTTTTGTGGCCTGCCAGGGTGGTCACGTGAAGATCGTTCGCGAGCTC
TTGGACTGCGGAGCGAATGTCAATGCGCACATGAAGGATCGAGCCACGCC
GGTTTTTATCTCCGCCCAAAATGGCCATCGCACGGTTCTGTCGCTGCTGA
TTCAGGCTGGTGCCGAGATCGATATCAAGCGGATAGACGGCGCCACGCCC
CTGTGGATAGCAGCCCAGATGGGACAGGATCACATATGCAAGGTGCTGCT
CCAGAACGGCGCCAATGTGGACACCGTGCGTTGCGACGGCGCCACGCCCC
TCTTCAAGGCGGCTCACAAGGGCCATGCCGCCGTAATCACCGTGCTGCTC
AAATACCGACCCAATCTCGGCCAGCTGCCCAATGGAGAGTCCGCACTGCA
TGCCGCCGCCATGTTTGGCCACATGACCGTCTGCAAGCAGCTGGTGGCCG
CCGGCAGCGATGTCCTGCTGAAGAACCACGATGGTCTGACGGCCCTGCAG
TTGGCGCACCAGCAAAAGTACACCTCCATCTGTGATTATCTCCAGGAACG
CATACGGACTATGGTGGCGCGCAGCGCCAAGGCAATGGCCACGTCCGGAG
TGTCGTCCACGGTCAAGACGATGTCGGCGGCAAGCTTTCTAGACCAT

BO14917.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:22:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG3104-RC 966 CG3104-PC 1..963 17..979 4815 100 Plus
CG3104-RB 966 CG3104-PB 1..963 17..979 4815 100 Plus
CG3104-RA 966 CG3104-PA 1..963 17..979 4815 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:22:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG3104-RC 2395 CG3104-RC 929..1892 16..979 4820 100 Plus
CG3104-RB 1933 CG3104-RB 467..1430 16..979 4820 100 Plus
CG3104-RA 2213 CG3104-RA 504..1467 16..979 4820 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:22:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2849735..2850279 979..435 2725 100 Minus
2L 23513712 2L 2850334..2850633 437..138 1500 100 Minus
2L 23513712 2L 2852146..2852259 140..27 570 100 Minus
Blast to na_te.dros performed on 2014-11-27 14:22:42 has no hits.

BO14917.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:02:29 Download gff for BO14917.complete
Subject Subject Range Query Range Percent Splice Strand
CG3104-RB 1..966 17..983 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:15:46 Download gff for BO14917.complete
Subject Subject Range Query Range Percent Splice Strand
CG3104-RB 461..1431 9..983 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:41:24 Download gff for BO14917.complete
Subject Subject Range Query Range Percent Splice Strand
CG3104-RA 505..1467 17..981 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:33:43 Download gff for BO14917.complete
Subject Subject Range Query Range Percent Splice Strand
CG3104-RB 466..1428 17..981 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:10:05 Download gff for BO14917.complete
Subject Subject Range Query Range Percent Splice Strand
CG3104-RA 505..1467 17..981 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:10:05 Download gff for BO14917.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2849733..2850277 437..981 99 <- Minus
2L 2850335..2850631 140..436 100 <- Minus
2L 2852147..2852268 18..139 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:41:24 Download gff for BO14917.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2849733..2850277 437..981 99 <- Minus
arm_2L 2850335..2850631 140..436 100 <- Minus
arm_2L 2852147..2852268 18..139 96   Minus

BO14917.pep Sequence

Translation from 16 to 997

> BO14917.pep
MSLKKETPSDVQLHMAAMRGDEVALLRVLDSGKVHVDCKDEDGTTPLILA
AAGGHTYCVMELLDQGADPNSRRLTGTTPLFFAAQGGHLDVVKILIKAGA
SVDTPSADGGTPLFVACQGGHVKIVRELLDCGANVNAHMKDRATPVFISA
QNGHRTVLSLLIQAGAEIDIKRIDGATPLWIAAQMGQDHICKVLLQNGAN
VDTVRCDGATPLFKAAHKGHAAVITVLLKYRPNLGQLPNGESALHAAAMF
GHMTVCKQLVAAGSDVLLKNHDGLTALQLAHQQKYTSICDYLQERIRTMV
ARSAKAMATSGVSSTVKTMSAASFLDH

BO14917.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:28:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG3104-PC 321 CG3104-PC 1..321 1..321 1647 100 Plus
CG3104-PB 321 CG3104-PB 1..321 1..321 1647 100 Plus
CG3104-PA 321 CG3104-PA 1..321 1..321 1647 100 Plus
Ank2-PN 1159 CG34416-PN 539..785 13..259 372 34.7 Plus
Ank2-PX 547 CG42734-PX 242..525 13..296 365 33.7 Plus
Ank2-PX 547 CG42734-PX 24..323 25..325 342 31.2 Plus
Ank2-PX 547 CG42734-PX 176..488 13..325 318 28.3 Plus
Ank2-PX 547 CG42734-PX 114..422 13..292 317 30.6 Plus