Clone BO14918 Report

Search the DGRC for BO14918

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:149
Well:18
Vector:pDNR-Dual
Associated Gene/TranscriptCG5554-RA
Protein status:BO14918.pep: validated full length
Sequenced Size:1003

Clone Sequence Records

BO14918.3prime Sequence

916 bp (792 high quality bases) assembled on 2006-05-29

> BO14918.3prime
ATGGTCTAGAAAGCTTGCATCGCCTTTGCGAGGCTTGCGCTTGCGCACCT
GTTCCGTCTTCTCGGGCGCAGCATCGCCGGCCTGCTTGGGCTCCGGCTTC
TCTTCCTTTTCCGGCTCGCTGTCGGCCTCCTTCTCTTTAGTGGCCAGATC
GCCCACCTGCTCCTCGCTGTCCTCTTCCTCTTCGTCGTCGTCCTCCTGTT
CTTCCTCGTCGCTATCGCGTTGCTCGTCATCGTTCTCCTCGGCGTCGCCA
TCATCCTCGATCTCCTCGGTTGCCAAATCCTCCAGGCCCTCGGTCAGATT
GTCCTGGGACTCGGAGAAGCTCTGGCGCTGCGACTTCTTGGGTGGGTAGA
CAAAGTCCACAAGGCACACGAGCAGCAGCCCCAGGGCAGCGCCCACGAAG
ATGGTGGCGATGGCGAAGAGGGCGTAGGAGCCCCACGTGGGCAGTCCGTA
TTCCTCCTGCAGGCGCCCGTTGAAGTCCTTCAGAGTGTGCGAAAGCTTGA
AGAAGTAGGACAGCACGGACATGTGGGTGGTGTCGGGCTTCTTCCAGGCG
GACAGCGGTTCGATGCTCTGCCACTGCTGCTTCTTCACGAAGTAGAGGAG
GGCGTCGCCATCACGGGCCCCACGATACTGCCGGAACTCGCCATCTTTTA
CGTGGTAGATGGTGGGGAGGGCGGTGACAAAGAAGCGTCCACTCAGCGAG
GGCGAGGTTGTCACGTCGATTTTGGCCACCTGCACCTGGACATCCTTGGC
CACGCGGGCAAACCGCTCCCAGGTGGGAGCCAGGTTCTTGCAGGCCGGGC
ACCATGGAGCAAAGAACTCGATCATCCATTCCCCCTGGAGCATCAGGTGC
CAGTTGTCCTCCTCCAACTCGATAAACTTGCCCACTGGCTGCAGCCCTGA
CTGCGCTGGTGCCGTC

BO14918.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG5554-PA 972 CG5554-RA 72..969 916..19 4315 99.2 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:52:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG5554-RA 1565 CG5554-RA 230..1127 916..19 4385 99.2 Minus
CG5554-RB 1586 CG5554-RB 230..1148 916..19 4165 97 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:52:28
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23846125..23846586 480..19 2310 100 Minus
2R 25286936 2R 23845766..23845941 652..477 880 100 Minus
2R 25286936 2R 23845535..23845696 814..653 810 100 Minus
2R 25286936 2R 23845230..23845331 916..815 405 93.1 Minus
Blast to na_te.dros performed 2015-01-30 18:52:32
Subject Length Description Subject Range Query Range Score Percent Strand
aurora-element 4263 aurora-element DMAURA 4263bp Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1). 2298..2405 264..158 114 60 Minus

BO14918.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:38:10 Download gff for BO14918.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5554-PA 72..972 18..916 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:38:05 Download gff for BO14918.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5554-PA 72..972 18..916 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 19:03:06 Download gff for BO14918.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5554-RA 230..1127 19..916 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:15:47 Download gff for BO14918.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5554-RA 230..1127 19..916 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:15:47 Download gff for BO14918.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 23845230..23845331 815..916 93 -> Minus
2R 23845535..23845696 653..814 100 -> Minus
2R 23845766..23845940 478..652 100 -> Minus
2R 23846128..23846586 19..477 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 19:03:06 Download gff for BO14918.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19732753..19732854 815..916 93 -> Minus
arm_2R 19733058..19733219 653..814 100 -> Minus
arm_2R 19733289..19733463 478..652 100 -> Minus
arm_2R 19733651..19734109 19..477 100   Minus

BO14918.5prime Sequence

826 bp (768 high quality bases) assembled on 2006-05-29

> BO14918.5prime
GAAGTTATCAGTCGACATGCATAGCACATCGTACTTTGTGGCCGCGACAT
GCGCGGCGCTGCTTCTGCTGGCGGCGACGGCGCAGTCGACGGCAGCAGCG
CAGTCAGGACTGCAGCCAGGTGGCAAGTTAATCGAGTTGGACGAGGACAA
CTGGCACCTGATGCTCCAGGGCGAATGGATGATCGAGTTCTTTGCTCCAT
GGTGCCCGGCCTGCAAGAACCTGGCTCCCACCTGGGAGCGGTTTGCCCGC
GTGGCCAAGGATGTCCAGGTGCAGGTGGCCAAAATCGACGTGACAACCTC
GCCCTCGCTGAGTGGACGCTTCTTTGTCACCGCCCTCCCCACCATCTACC
ACGTAAAAGATGGCGAGTTCCGGCAGTATCGTGGGGCCCGTGATGGCGAC
GCCCTCCTCTACTTCGTGAAGAAGCAGCAGTGGCAGAGCATCGAACCGCT
GTCCGCCTGGAAGAAGCCCGACACCACCCACATGTCCGTGCTGTCCTACT
TCTTCAAGCTTTCGCACACTCTGAAGGACTTCAACGGGCGCCTGCAGGAG
GAATACGGACTGCCCACGTGGGGCTCCTACGCCCTCTTCGCCATCGCCAC
CATCTTCGTGGGCGCTGCCCTGGGGCTGCTGCTCGTGTGCCTTGTGGACT
TTGTCTACCCACCCAAGAAGTCGCAGCGCCAGAGCTTCTCCGAGTCCCAG
GACAATCTGACCGACGGCCTGGAGGATTTGGCAACCGAGGAGATCGAGGA
TGATGGCGACGCCGAGGAGAACGATGACGAGCAACGCGATAAGCGACGAG
GAAGAACAGGAGGACGACGACGAACA

BO14918.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG5554-PA 972 CG5554-RA 1..775 17..791 3850 99.8 Plus
CG5554-PA 972 CG5554-RA 775..807 792..824 165 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:20:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG5554-RA 1565 CG5554-RA 157..965 15..824 4010 99.8 Plus
CG5554-RB 1586 CG5554-RB 157..986 15..824 3790 97.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:20:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23846125..23846424 524..824 1440 99.3 Plus
2R 25286936 2R 23845766..23845941 352..527 880 100 Plus
2R 25286936 2R 23845157..23845331 15..189 875 100 Plus
2R 25286936 2R 23845535..23845696 190..351 810 100 Plus
Blast to na_te.dros performed 2015-02-12 05:20:23
Subject Length Description Subject Range Query Range Score Percent Strand
blood 7410 blood BLOOD 7410bp 198..239 47..88 120 76.2 Plus
blood 7410 blood BLOOD 7410bp 7209..7250 47..88 120 76.2 Plus

BO14918.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:38:11 Download gff for BO14918.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5554-PA 1..807 17..825 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:38:06 Download gff for BO14918.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5554-PA 1..807 17..825 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:55:51 Download gff for BO14918.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5554-RA 151..965 7..825 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:31:50 Download gff for BO14918.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5554-RA 151..965 7..825 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:31:50 Download gff for BO14918.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 23845151..23845331 7..189 98 -> Plus
2R 23845535..23845696 190..351 100 -> Plus
2R 23845766..23845940 352..526 100 -> Plus
2R 23846128..23846424 527..825 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:55:51 Download gff for BO14918.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19732674..19732854 7..189 98 -> Plus
arm_2R 19733058..19733219 190..351 100 -> Plus
arm_2R 19733289..19733463 352..526 100 -> Plus
arm_2R 19733651..19733947 527..825 98   Plus

BO14918.complete Sequence

1003 bp (1003 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633276

> BO14918.complete
GAAGTTATCAGTCGACATGCATAGCACATCGTACTTTGTGGCCGCGACAT
GCGCGGCGCTGCTTCTGCTGGCGGCGACGGCGCAGTCGACGGCAGCAGCG
CAGTCAGGACTGCAGCCAGGTGGCAAGTTAATCGAGTTGGACGAGGACAA
CTGGCACCTGATGCTCCAGGGCGAATGGATGATCGAGTTCTTTGCTCCAT
GGTGCCCGGCCTGCAAGAACCTGGCTCCCACCTGGGAGCGGTTTGCCCGC
GTGGCCAAGGATGTCCAGGTGCAGGTGGCCAAAATCGACGTGACAACCTC
GCCCTCGCTGAGTGGACGCTTCTTTGTCACCGCCCTCCCCACCATCTACC
ACGTAAAAGATGGCGAGTTCCGGCAGTATCGTGGGGCCCGTGATGGCGAC
GCCCTCCTCTACTTCGTGAAGAAGCAGCAGTGGCAGAGCATCGAACCGCT
GTCCGCCTGGAAGAAGCCCGACACCACCCACATGTCCGTGCTGTCCTACT
TCTTCAAGCTTTCGCACACTCTGAAGGACTTCAACGGGCGCCTGCAGGAG
GAATACGGACTGCCCACGTGGGGCTCCTACGCCCTCTTCGCCATCGCCAC
CATCTTCGTGGGCGCTGCCCTGGGGCTGCTGCTCGTGTGCCTTGTGGACT
TTGTCTACCCACCCAAGAAGTCGCAGCGCCAGAGCTTCTCCGAGTCCCAG
GACAATCTGACCGAGGGCCTGGAGGATTTGGCAACCGAGGAGATCGAGGA
TGATGGCGACGCCGAGGAGAACGATGACGAGCAACGCGATAGCGACGAGG
AAGAACAGGAGGACGACGACGAAGAGGAAGAGGACAGCGAGGAGCAGGTG
GGCGATCTGGCCACTAAAGAGAAGGAGGCCGACAGCGAGCCGGAAAAGGA
AGAGAAGCCGGAGCCCAAGCAGGCCGGCGATGCTGCGCCCGAGAAGACGG
AACAGGTGCGCAAGCGCAAGCCTCGCAAAGGCGATGCAAGCTTTCTAGAC
CAT

BO14918.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:18:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG5554-RA 972 CG5554-PA 1..969 17..985 4845 100 Plus
CG5554-RB 993 CG5554-PB 1..990 17..985 4600 97.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:18:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG5554-RA 1565 CG5554-RA 157..1127 15..985 4855 100 Plus
CG5554-RB 1586 CG5554-RB 157..1148 15..985 4610 97.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:18:09
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23846125..23846586 524..985 2310 100 Plus
2R 25286936 2R 23845766..23845941 352..527 880 100 Plus
2R 25286936 2R 23845157..23845331 15..189 875 100 Plus
2R 25286936 2R 23845535..23845696 190..351 810 100 Plus
Blast to na_te.dros performed 2014-11-27 10:18:10
Subject Length Description Subject Range Query Range Score Percent Strand
blood 7410 blood BLOOD 7410bp 198..239 47..88 120 76.2 Plus
blood 7410 blood BLOOD 7410bp 7209..7250 47..88 120 76.2 Plus
aurora-element 4263 aurora-element DMAURA 4263bp Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1). 2298..2405 740..846 114 60 Plus

BO14918.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:19 Download gff for BO14918.complete
Subject Subject Range Query Range Percent Splice Strand
CG5554-RA 1..972 17..986 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:35:59 Download gff for BO14918.complete
Subject Subject Range Query Range Percent Splice Strand
CG5554-RA 260..1236 7..985 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:06:56 Download gff for BO14918.complete
Subject Subject Range Query Range Percent Splice Strand
CG5554-RA 159..1127 17..987 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:19 Download gff for BO14918.complete
Subject Subject Range Query Range Percent Splice Strand
CG5554-RA 260..1236 7..985 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:18:16 Download gff for BO14918.complete
Subject Subject Range Query Range Percent Splice Strand
CG5554-RA 159..1127 17..987 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:18:16 Download gff for BO14918.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23845159..23845331 17..189 100 -> Plus
2R 23845535..23845696 190..351 100 -> Plus
2R 23845766..23845940 352..526 100 -> Plus
2R 23846128..23846586 527..987 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:06:56 Download gff for BO14918.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19732682..19732854 17..189 100 -> Plus
arm_2R 19733058..19733219 190..351 100 -> Plus
arm_2R 19733289..19733463 352..526 100 -> Plus
arm_2R 19733651..19734109 527..987 99   Plus

BO14918.pep Sequence

Translation from 16 to 1003

> BO14918.pep
MHSTSYFVAATCAALLLLAATAQSTAAAQSGLQPGGKLIELDEDNWHLML
QGEWMIEFFAPWCPACKNLAPTWERFARVAKDVQVQVAKIDVTTSPSLSG
RFFVTALPTIYHVKDGEFRQYRGARDGDALLYFVKKQQWQSIEPLSAWKK
PDTTHMSVLSYFFKLSHTLKDFNGRLQEEYGLPTWGSYALFAIATIFVGA
ALGLLLVCLVDFVYPPKKSQRQSFSESQDNLTEGLEDLATEEIEDDGDAE
ENDDEQRDSDEEEQEDDDEEEEDSEEQVGDLATKEKEADSEPEKEEKPEP
KQAGDAAPEKTEQVRKRKPRKGDASFLDH

BO14918.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:48:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG5554-PA 323 CG5554-PA 1..323 1..323 1695 100 Plus
CG5554-PB 330 CG5554-PB 1..330 1..323 1677 97.9 Plus
prtp-PD 353 CG1837-PD 103..206 36..136 185 39.4 Plus
prtp-PC 416 CG1837-PC 166..269 36..136 185 39.4 Plus
prtp-PB 416 CG1837-PB 166..269 36..136 185 39.4 Plus
prtp-PC 416 CG1837-PC 1..208 1..189 166 27.4 Plus