Clone Sequence Records
BO14920.5prime Sequence
335 bp (334 high quality bases) assembled on 2006-05-29
> BO14920.5prime
GAAGTTATCAGTCGACATGAATCGCATTCTCGAGAAGGTGATTCACCAGA
ATGGAACAATCGTGGATCGCATTCTATCGGAACATACTATTGGGTATGTG
GTGTCCGATAACACAGCCAATGCGGTGGCCGAAACATCCTTCGATAACAC
AAGTGCCCAGGCGATCCTGAAGCACTTACATGGACTCCTGGTGAGCACCT
GCCAAAGCGTAGTCCGGGACATTGACCCGTCCAACAAACTCTGCTTCATG
CGCCTGGGCACTCGCAAGTTCGAGTATCTGGTGGCCCCAGAGGAGTACTT
CACCATTACAGTGGTTCAAGCAAGCTTTCTAGACC
BO14920.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31275-PB | 306 | CG31275-RB | 1..303 | 17..319 | 1515 | 100 | Plus |
CG31275-PA | 306 | CG31275-RA | 1..303 | 17..319 | 1515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:51:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31275-RA | 594 | CG31275-RA | 62..364 | 17..319 | 1515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:51:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 16750971..16751273 | 319..17 | 1515 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:51:56 has no hits.
BO14920.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:38:15 Download gff for
BO14920.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31275-PA | 1..306 | 17..322 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:38:12 Download gff for
BO14920.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31275-PA | 1..306 | 17..322 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 20:33:23 Download gff for
BO14920.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31275-RB | 117..423 | 17..323 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:05:32 Download gff for
BO14920.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31275-RA | 62..368 | 17..323 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:05:32 Download gff for
BO14920.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16750966..16751273 | 17..323 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 20:33:23 Download gff for
BO14920.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12576688..12576995 | 17..323 | 99 | | Minus |
BO14920.3prime Sequence
335 bp (334 high quality bases) assembled on 2006-05-29
> BO14920.3prime
ATGGTCTAGAAAGCTTGCTTGAACCACTGTAATGGTGAAGTACTCCTCTG
GGGCCACCAGATACTCGAACTTGCGAGTGCCCAGGCGCATGAAGCAGAGT
TTGTTGGACGGGTCAATGTCCCGGACTACGCTTTGGCAGGTGCTCACCAG
GAGTCCATGTAAGTGCTTCAGGATCGCCTGGGCACTTGTGTTATCGAAGG
ATGTTTCGGCCACCGCATTGGCTGTGTTATCGGACACCACATACCCAATA
GTATGTTCCGATAGAATGCGATCCACGATTGTTCCATTCTGGTGAATCAC
CTTCTCGAGAATGCGATTCATGTCGACTGATAACT
BO14920.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31275-PB | 306 | CG31275-RB | 1..303 | 321..19 | 1515 | 100 | Minus |
CG31275-PA | 306 | CG31275-RA | 1..303 | 321..19 | 1515 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:47:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31275-RA | 594 | CG31275-RA | 62..364 | 321..19 | 1515 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:47:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 16750971..16751273 | 19..321 | 1515 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 13:47:02 has no hits.
BO14920.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:38:14 Download gff for
BO14920.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31275-PA | 1..306 | 16..321 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:38:10 Download gff for
BO14920.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31275-PA | 1..306 | 16..321 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 12:36:26 Download gff for
BO14920.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31275-RB | 117..423 | 15..321 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:06:41 Download gff for
BO14920.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31275-RA | 62..368 | 15..321 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:06:41 Download gff for
BO14920.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16750966..16751273 | 15..321 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 12:36:26 Download gff for
BO14920.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12576688..12576995 | 15..321 | 99 | | Plus |
BO14920.complete Sequence
337 bp (337 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633278
> BO14920.complete
GAAGTTATCAGTCGACATGAATCGCATTCTCGAGAAGGTGATTCACCAGA
ATGGAACAATCGTGGATCGCATTCTATCGGAACATACTATTGGGTATGTG
GTGTCCGATAACACAGCCAATGCGGTGGCCGAAACATCCTTCGATAACAC
AAGTGCCCAGGCGATCCTGAAGCACTTACATGGACTCCTGGTGAGCACCT
GCCAAAGCGTAGTCCGGGACATTGACCCGTCCAACAAACTCTGCTTCATG
CGCCTGGGCACTCGCAAGTTCGAGTATCTGGTGGCCCCAGAGGAGTACTT
CACCATTACAGTGGTTCAAGCAAGCTTTCTAGACCAT
BO14920.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:52:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31275-RA | 306 | CG31275-PA | 1..303 | 17..319 | 1515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:52:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31275-RA | 594 | CG31275-RA | 62..364 | 17..319 | 1515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:52:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 16750971..16751273 | 319..17 | 1515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:52:07 has no hits.
BO14920.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:21 Download gff for
BO14920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31275-RA | 1..306 | 17..322 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:36:02 Download gff for
BO14920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31275-RB | 117..423 | 17..323 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:00:00 Download gff for
BO14920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31275-RB | 117..419 | 17..321 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:21 Download gff for
BO14920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31275-RB | 117..423 | 17..323 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:29:00 Download gff for
BO14920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31275-RA | 62..364 | 17..321 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:29:00 Download gff for
BO14920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16750968..16751273 | 17..321 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:00:00 Download gff for
BO14920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12576690..12576995 | 17..321 | 99 | | Minus |
BO14920.pep Sequence
Translation from 16 to 337
> BO14920.pep
MNRILEKVIHQNGTIVDRILSEHTIGYVVSDNTANAVAETSFDNTSAQAI
LKHLHGLLVSTCQSVVRDIDPSNKLCFMRLGTRKFEYLVAPEEYFTITVV
QASFLDH
BO14920.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:47:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31275-PA | 101 | CG31275-PA | 1..101 | 1..101 | 513 | 100 | Plus |
robl62A-PB | 104 | CG1014-PB | 7..103 | 3..100 | 243 | 49 | Plus |
robl62A-PA | 104 | CG1014-PA | 7..103 | 3..100 | 243 | 49 | Plus |