Clone Sequence Records
BO14925.3prime Sequence
881 bp (822 high quality bases) assembled on 2006-05-29
> BO14925.3prime
ATGGTCTAGAAAGCTTGCGTTTTTCGGCTTCAACTCAAAGGATTCGCTGA
CGTTAATGGGGATATTGAACTCCTTTGCCTTTGCTCGTGATCGCCAGACC
TTAATTGTGTAGTCGTCGCTGGTGGTGACCAGCATCTCCGAGTCGCGAGG
ATTGAAGGCCACACTGTTAACCACATCCGAGTGCTTAAACTTTGCTAGGC
TGATGCCGTAGTACCTATCCCACAGGTAGGCATGTTGATCTTCCGCTCCA
CTGGCCACGTACTCCTCGCAAACATCAAGGAAGATAAAGAAGCACTCCGC
GCTGGGAGTGTAGGCCTTGTGGGCGCGCAGCATGTTGCCCACCCGCTTGA
GAGTCATTAGGTCAATTACGTGGATGTCAATCTCTTGAGCAATTGGTGGC
GGCTCCAGAGGGTTGGTGATCACGTAGTTCTTTGGCCAGGGACGTGTGTT
GACGTACAAGTAGCGGTGGTCCGGGCTCAGTGCCATGCCAATAATATGTC
CGTGCAAGTCAATTACCTTGTCCACCTTGTCGAATCTATCCTTGACTGAC
TCATAATCCCACCAGTCTGGATCAGTCCGCGGGGTCTGCTGCTGTTGCTG
TTCGGCAGCGCGCTTTGCAGCTATTCTTTCTTTAAGACTTGGCCCAGGAT
CAAGCTTTTTGGGAAAGAACACGTTGCGTATGCGCTTGAATCCAATTTGG
TGAGGCGTGAAGGTGGTGGAGCCCGTTGAAAAAATTAGATATTTGGGTAT
ACTGTTCTCCATTTCGTCGTATTCCTCTTGTACGTCCATAGAGTCGTACT
CCTCGTCGTCGTCATCGTTCGATTCATTAGTGGTGGCCACTGCTGTCCTG
TATTCATCTAAGTAGTGAATGGTGCCATCGC
BO14925.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9144-PA | 1971 | CG9144-RA | 1106..1968 | 881..19 | 4290 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:47:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fbw5-RA | 2285 | CG9144-RA | 1294..2156 | 881..19 | 4300 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:47:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6063824..6064607 | 98..881 | 3905 | 99.9 | Plus |
| 2L | 23513712 | 2L | 6063691..6063773 | 19..101 | 415 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 03:47:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Juan | 4236 | Juan JUAN 4236bp | 3627..3658 | 725..756 | 115 | 84.4 | Plus |
BO14925.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:38:20 Download gff for
BO14925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9144-PA | 1106..1971 | 15..881 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:38:20 Download gff for
BO14925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9144-PA | 1106..1971 | 15..881 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:42:50 Download gff for
BO14925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbw5-RA | 1294..2159 | 15..881 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:50:52 Download gff for
BO14925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbw5-RA | 1294..2159 | 15..881 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:50:52 Download gff for
BO14925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6063688..6063771 | 15..99 | 97 | <- | Plus |
| 2L | 6063826..6064607 | 100..881 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:42:50 Download gff for
BO14925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6063688..6063771 | 15..99 | 97 | <- | Plus |
| arm_2L | 6063826..6064607 | 100..881 | 99 | | Plus |
BO14925.5prime Sequence
895 bp (794 high quality bases) assembled on 2006-05-29
> BO14925.5prime
GAAGTTATCAGTCGACATGGAAGTGACCTTCAAGAAGGCCCGACTGGGAA
AGGAGAGACTGGTGGAACAATCGGAGGAGGAGGAACGCGATGAGGGCTCC
TCTGGCCAAGATTTGTTTGGGTGGTGGGCCCTGCCGGAGCCAGCGCTCTT
GATGATCTTTGAGCGCCTGAGTGTGCCCGATCTGCTGAGGGCGAGTCGCT
GCTGTGTGCGGTGGCACAGCATCGCCAAGGACGACTTATTGTGGCGCCAC
AAGTTCCAGGAGCACTTCAAAGCCTCTCCGAGCATTCCGCTCAAGCCGGG
GTCCGAAAGCTGGCGAGCGGAGTACAAGCGCCTGTCCATGCACATACCCT
TTGTCCAGGCACAGCGACTGGAGCCCACTGTGGAGAACAACCACGGCCAC
ACGCACCAAGTGCTGCATGTAAGCTTTGCCCACAACGGGGAAATGTTTGC
CACCTGCTCCAAGGACGGATATGTGATAATCTGGAACGCCCAGCATCCGT
GTTCGGAGAAGTATGCGCACAACATGAAGCAGTTCAGCTGGAAGTACTCC
CAATACTCGCAGTTCAATCAAAGCGACACCTTGCTTCTCGTCTCCGGTGT
TCACTTTGGTTCGCCCCAATCCACTTCCGGGGAGATTGCTGTATTCTATT
TGGGAGCAACAGAGTCACACCTACGCTGCCGGGTGGTAAATCGTCCGTAT
GACATCTTTGGCACCTGGTTCAGTGACCAATATCTGATCTCANGCGACCT
GCACTGGCTGGCGCACTTGGTGAGCACCTCGGTTCTGTGGCTGAACAAGC
CAACCAAGAAATTGACTCGGAGCATGTGCCGATCATGAGCCAGCTATATA
AGTTTTACAACCGAAATGCTAGTTCGGTTCGAGCTATAATGGTGG
BO14925.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9144-PA | 1971 | CG9144-RA | 1..783 | 17..799 | 3896 | 99.8 | Plus |
| CG9144-PA | 1971 | CG9144-RA | 784..880 | 799..895 | 485 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:23:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fbw5-RA | 2285 | CG9144-RA | 188..1068 | 16..895 | 4369 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:23:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6065304..6065766 | 478..16 | 2315 | 100 | Minus |
| 2L | 23513712 | 2L | 6064833..6065250 | 895..479 | 2029 | 99.5 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:23:42 has no hits.
BO14925.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:38:21 Download gff for
BO14925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9144-PA | 1..880 | 17..895 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:38:21 Download gff for
BO14925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9144-PA | 1..880 | 17..895 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:30:45 Download gff for
BO14925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbw5-RA | 184..1068 | 12..895 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:27:20 Download gff for
BO14925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbw5-RA | 184..1068 | 12..895 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:27:20 Download gff for
BO14925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6064833..6065250 | 479..895 | 99 | <- | Minus |
| 2L | 6065304..6065770 | 12..478 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:30:45 Download gff for
BO14925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6064833..6065250 | 479..895 | 99 | <- | Minus |
| arm_2L | 6065304..6065770 | 12..478 | 99 | | Minus |
BO14925.complete Sequence
2002 bp (2002 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ633280
> BO14925.complete
GAAGTTATCAGTCGACATGGAAGTGACCTTCAAGAAGGCCCGACTGGGAA
AGGAGAGACTGGTGGAACAATCGGAGGAGGAGGAACGCGATGAGGGCTCC
TCTGGCCAAGATTTGTTTGGGTGGTGGGCCCTGCCGGAGCCAGCGCTCTT
GATGATCTTTGAGCGCCTGAGTGTGCCCGATCTGCTGAGGGCGAGTCGCT
GCTGTGTGCGGTGGCACAGCATCGCCAAGGACGACTTATTGTGGCGCCAC
AAGTTCCAGGAGCACTTCAAAGCCTCTCCGAGCATTCCGCTCAAGCCGGG
GTCCGAAAGCTGGCGAGCGGAGTACAAGCGCCTGTCCATGCACATACCCT
TTGTCCAGGCACAGCGACTGGAGCCCACTGTGGAGAACAACCACGGCCAC
ACGCACCAAGTGCTGCATGTAAGCTTTGCCCACAACGGGGAAATGTTTGC
CACCTGCTCCAAGGACGGATATGTGATAATCTGGAACGCCCAGCATCCGT
GTTCGGAGAAGTATGCGCACAACATGAAGCAGTTCAGCTGGAAGTACTCC
CAATACTCGCAGTTCAATCAAAGCGACACCTTGCTTCTCGTCTCCGGTGT
TCACTTTGGTTCGCCCCAATCCACTTCCGGGGAGATTGCTGTATTCTATT
TGGGAGCAACAGAGTCACACCTACGCTGCCGGGTGGTAAATCGTCCGTAT
GACATCTTTGGCACCTGGTTCAGTGACCAATATCTGATCTCAGGCGACCT
GCACTGGCTGGCGCACTTGGTGAGCACCTCGGTTCTGTGGCTGAACAAGG
CCAACCAAGAAATTGACTCGGAGCATGTGCCGATCATGAGCCAGCTATAT
AAGTTTTACAACCGAAATGCTAGTTCGGTTCGAGCTATAATGGTGGCCAG
GTGTCCATGGCTGGACGAGAGTAACGATCCCCTGGCCACTACTGCCGACC
AAGAAAGTCACAGCTCAGTGCTCTCGCCACCCACTGGAGATCAGGGATCT
ACCTCGCAGGCCAGTGGCAATCCAGTGTCCCACGCTGCCAGCATACTACG
CACAAGAAGCTCAACACCCGAAGAAAACTACTTGCCGGACATCAGTGAGC
GCCGTTCTAGAGCGAGACTCGGCGATGCCACCATTCACTACTTAGATGAA
TACAGGACAGCAGTGGCCACCACTAATGAATCGAACGATGACGACGACGA
GGAGTACGACTCTATGGACGTACAAGAGGAATACGACGAAATGGAGAACA
GTATACCCAAATATCTAATTTTTTCAACGGGCTCCACCACCTTCACGCCT
CACCAAATTGGATTCAAGCGCATACGCAACGTGTTCTTTCCCAAAAAGCT
TGATCCTGGGCCAAGTCTTAAAGAAAGAATAGCTGCAAAGCGCGCTGCCG
AACAGCAACAGCAGCAGACCCCGCGGACTGATCCAGACTGGTGGGATTAT
GAGTCAGTCAAGGATAGATTCGACAAGGTGGACAAGGTAATTGACTTGCA
CGGACATATTATTGGCATGGCACTGAGCCCGGACCACCGCTACTTGTACG
TCAACACACGTCCCTGGCCAAAGAACTACGTGATCACCAACCCTCTGGAG
CCGCCACCAATTGCTCAAGAGATTGACATCCACGTAATTGACCTAATGAC
TCTCAAGCGGGTGGGCAACATGCTGCGCGCCCACAAGGCCTACACTCCCA
GCGCGGAGTGCTTCTTTATCTTCCTTGATGTTTGCGAGGAGTACGTGGCC
AGTGGAGCGGAAGATCAACATGCCTACCTGTGGGATAGGTACTACGGCAT
CAGCCTAGCAAAGTTTAAGCACTCGGATGTGGTTAACAGTGTGGCCTTCA
ATCCTCGCGACTCGGAGATGCTGGTCACCACCAGCGACGACTACACAATT
AAGGTCTGGCGATCACGAGCAAAGGCAAAGGAGTTCAATATCCCCATTAA
CGTCAGCGAATCCTTTGAGTTGAAGCCGAAAAACGCAAGCTTTCTAGACC
AT
BO14925.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:57:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fbw5-RA | 1971 | CG9144-PA | 1..1968 | 17..1984 | 9840 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:57:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fbw5-RA | 2285 | CG9144-RA | 188..2156 | 16..1984 | 9845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:57:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6063824..6065250 | 1905..479 | 7135 | 100 | Minus |
| 2L | 23513712 | 2L | 6065304..6065766 | 478..16 | 2315 | 100 | Minus |
| 2L | 23513712 | 2L | 6063691..6063773 | 1984..1902 | 415 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 20:57:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Juan | 4236 | Juan JUAN 4236bp | 3627..3658 | 1278..1247 | 115 | 84.4 | Minus |
BO14925.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:54:45 Download gff for
BO14925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9144-RA | 1..1971 | 17..1988 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:11:13 Download gff for
BO14925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9144-RA | 180..2155 | 12..1988 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:13:35 Download gff for
BO14925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbw5-RA | 189..2156 | 17..1986 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:54:45 Download gff for
BO14925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9144-RA | 180..2155 | 12..1988 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:31:53 Download gff for
BO14925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbw5-RA | 189..2156 | 17..1986 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:31:53 Download gff for
BO14925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6063689..6063771 | 1904..1986 | 97 | <- | Minus |
| 2L | 6063826..6065250 | 479..1903 | 100 | <- | Minus |
| 2L | 6065304..6065765 | 17..478 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:13:35 Download gff for
BO14925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6063689..6063771 | 1904..1986 | 97 | <- | Minus |
| arm_2L | 6063826..6065250 | 479..1903 | 100 | <- | Minus |
| arm_2L | 6065304..6065765 | 17..478 | 100 | | Minus |
BO14925.pep Sequence
Translation from 16 to 2002
> BO14925.pep
MEVTFKKARLGKERLVEQSEEEERDEGSSGQDLFGWWALPEPALLMIFER
LSVPDLLRASRCCVRWHSIAKDDLLWRHKFQEHFKASPSIPLKPGSESWR
AEYKRLSMHIPFVQAQRLEPTVENNHGHTHQVLHVSFAHNGEMFATCSKD
GYVIIWNAQHPCSEKYAHNMKQFSWKYSQYSQFNQSDTLLLVSGVHFGSP
QSTSGEIAVFYLGATESHLRCRVVNRPYDIFGTWFSDQYLISGDLHWLAH
LVSTSVLWLNKANQEIDSEHVPIMSQLYKFYNRNASSVRAIMVARCPWLD
ESNDPLATTADQESHSSVLSPPTGDQGSTSQASGNPVSHAASILRTRSST
PEENYLPDISERRSRARLGDATIHYLDEYRTAVATTNESNDDDDEEYDSM
DVQEEYDEMENSIPKYLIFSTGSTTFTPHQIGFKRIRNVFFPKKLDPGPS
LKERIAAKRAAEQQQQQTPRTDPDWWDYESVKDRFDKVDKVIDLHGHIIG
MALSPDHRYLYVNTRPWPKNYVITNPLEPPPIAQEIDIHVIDLMTLKRVG
NMLRAHKAYTPSAECFFIFLDVCEEYVASGAEDQHAYLWDRYYGISLAKF
KHSDVVNSVAFNPRDSEMLVTTSDDYTIKVWRSRAKAKEFNIPINVSESF
ELKPKNASFLDH
BO14925.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:56:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fbw5-PA | 656 | CG9144-PA | 1..656 | 1..656 | 3511 | 100 | Plus |
