Clone BO14926 Report

Search the DGRC for BO14926

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:149
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG3823-RA
Protein status:BO14926.pep: validated full length
Sequenced Size:919

Clone Sequence Records

BO14926.3prime Sequence

911 bp (831 high quality bases) assembled on 2006-05-29

> BO14926.3prime
ATGGTCTAGAAAGCTTGCATCAATTTCGAGGGAACGTAGACCTTCTGTGA
CTCCGGAATCACTTGACTTTCGTTGGCCATTCTTTTTGATTTTGTTTATT
TGCCAGTTTTCCGTATCCATCAGATAATCCCTCTGCTCCTTGAGCAACTG
CATCCACTGGAGCTTCAGGTCGGACATCTTGCCCGCCTCCCCGCCGTATT
CCTCCGGCAACATGGATCGCGGGAAGTGCCGATATGGAGTGTCCGCATTT
GGCAAATGGAAATGGATTAGCTTGAACACCTCTCCCTTGATGAACGGCTT
GACCACGGCCATCACCTTGTCCACATACGACGGGCAGTTGAGCACGTGGA
TCTCCTTGAGCCGTACGGGATGTGCCTCCTGGACGAACTTCATGTAGACA
CGCAGGGCGCCCAGTGCGGTTTTGGTCAGGTGGCGCAGCGTATAGCCAGC
CATGTCGAAAACTGGTATCTCGCCGTCCGACAAACGCTCCTCGTTCTCCG
TCGCAAATCGACAGTCGGCCACCATGAAAAAGACCTTGATGGCAGCCGTA
AAGTTGAACTTGTCCGCATCGAAGTCGATGAGGCGGTAAAAGAGCAGCTT
GTTGTTCTCCGGGGTCAAGCCGGGCAACGGCACCAGATCTGCGACTTGCA
GTAGCTGCTGGGAACTGGCATCCAACGGATCGCGATCGATGAAGATGTGT
GCATGTTTGTTACGCAGTCCGTAATTCAGTTCCAAGAGTCGCTGGGCGGC
GGATAGATCACCCCGCGTCGTGTGCAGAAAGCGGCGCAGAAGCAATCGGG
ATATATTTTGCGGCAACTGTGGCTGCGCCTGCAGCCAATCCTGCAAATCC
GAAATCCTTGTGGTCATCAGCTGATCCTCCGCTTTCTCATTTAGGTGGAC
CATGTCGACTG

BO14926.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG3823-PA 888 CG3823-RA 1..885 903..19 4425 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:48:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG3823-RA 1282 CG3823-RA 142..1031 908..19 4435 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:48:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6305864..6306294 560..130 2155 100 Minus
X 23542271 X 6304717..6304876 800..641 800 100 Minus
X 23542271 X 6306381..6306494 132..19 570 100 Minus
X 23542271 X 6304116..6304223 908..801 525 99.1 Minus
X 23542271 X 6305684..6305765 640..559 410 100 Minus
Blast to na_te.dros performed on 2015-02-11 15:48:56 has no hits.

BO14926.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:38:22 Download gff for BO14926.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3823-PA 1..888 18..903 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:38:23 Download gff for BO14926.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3823-PA 1..888 18..903 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:31:45 Download gff for BO14926.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 140..1031 19..911 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:32:33 Download gff for BO14926.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 140..1031 19..911 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:32:33 Download gff for BO14926.3prime
Subject Subject Range Query Range Percent Splice Strand
X 6304114..6304223 801..911 97 -> Minus
X 6304717..6304876 641..800 100 -> Minus
X 6305684..6305765 559..640 100 -> Minus
X 6305866..6306293 131..558 100 -> Minus
X 6306383..6306494 19..130 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:31:45 Download gff for BO14926.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6198147..6198256 801..911 97 -> Minus
arm_X 6198750..6198909 641..800 100 -> Minus
arm_X 6199717..6199798 559..640 100 -> Minus
arm_X 6199899..6200326 131..558 100 -> Minus
arm_X 6200416..6200527 19..130 100   Minus

BO14926.5prime Sequence

922 bp (805 high quality bases) assembled on 2006-05-29

> BO14926.5prime
GAAGTTATCAGTCGACATGGTCCACCTAAATGAGAAAGCGGAGGATCAGC
TGATGACCACAAGGATTTCGGATTTGCAGGATTGGCTGCAGGCGCAGCCA
CAGTTGCCGCAAAATATATCCCGATTGCTTCTGCGCCGCTTTCTGCACAC
GACGCGGGGTGATCTATCCGCCGCCCAGCGACTCTTGGAACTGAATTACG
GACTGCGTAACAAACATGCACACATCTTCATCGATCGCGATCCGTTGGAT
GCCAGTTCCCAGCAGCTACTGCAAGTCGCAGATCTGGTGCCGTTGCCCGG
CTTGACCCCGGAGAACAACAAGCTGCTCTTTTACCGCCTCATCGACTTCG
ATGCGGACAAGTTCAACTTTACGGCTGCCATCAAGGTCTTTTTCATGGTG
GCCGACTGTCGATTTGCGACGGAGAACGAGGAGCGTTTGTCGGACGGCGA
GATACCAGTTTTCGACATGGCTGGCTATACGCTGCGCCACCTGACCAAAA
CCGCACTGGGCGCCCTGCGTGTCTACATGAAGTTCGTCCAGGAGGCACAT
CCCGTACGGCTCAAGGAGATCCACGTGCTCAACTGCCCGTCGTATGTGGA
CAAGGTGATGGCCGTGGTCAAGCCGTTCATCAAGGGAGAGGTGTTCAAGC
TAATCCATTTCCATTTGCCAAATGCGGACACTCCATATCGGCACTTCCCG
CGATCCATGTTGCCGGAGGAATACGGCGGGGAGGCGGGCAAGATGTCCGA
CCTGAAGCTCCAGTGGATGCAGTTGCTCAAGGAGCAGAGGGATTATCTGA
TGGATACGGGAAACTGGCAAATAACAAAATCAAAAGAATGGCCAACGAAA
GTCAAGTGATTCCGGAGTCACAGAAAGTCTACGTTCCCTCGAATTGATGC
AAGCTTCTAGACCATTCGTTTG

BO14926.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG3823-PA 888 CG3823-RA 1..808 17..824 4015 99.8 Plus
CG3823-PA 888 CG3823-RA 818..879 832..893 285 98.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 08:11:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG3823-RA 1282 CG3823-RA 142..1031 12..898 4330 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 08:11:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6305864..6306294 360..790 2155 100 Plus
X 23542271 X 6304717..6304876 120..279 800 100 Plus
X 23542271 X 6304116..6304223 12..119 525 99.1 Plus
X 23542271 X 6305684..6305765 280..361 410 100 Plus
X 23542271 X 6306381..6306488 788..893 410 96.3 Plus
Blast to na_te.dros performed on 2015-02-02 08:11:05 has no hits.

BO14926.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:38:23 Download gff for BO14926.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3823-PA 1..888 17..899 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:38:24 Download gff for BO14926.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3823-PA 1..888 17..899 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:46:54 Download gff for BO14926.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 142..1031 12..898 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:18:13 Download gff for BO14926.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 142..1031 12..898 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:18:13 Download gff for BO14926.5prime
Subject Subject Range Query Range Percent Splice Strand
X 6304116..6304223 12..119 99 -> Plus
X 6304717..6304876 120..279 100 -> Plus
X 6305684..6305765 280..361 100 -> Plus
X 6305866..6306293 362..789 100 -> Plus
X 6306383..6306494 790..898 95   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:46:54 Download gff for BO14926.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6200416..6200527 790..898 95   Plus
arm_X 6199899..6200326 362..789 100 -> Plus
arm_X 6198149..6198256 12..119 99 -> Plus
arm_X 6198750..6198909 120..279 100 -> Plus
arm_X 6199717..6199798 280..361 100 -> Plus

BO14926.complete Sequence

919 bp (919 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633281

> BO14926.complete
GAAGTTATCAGTCGACATGGTCCACCTAAATGAGAAAGCGGAGGATCAGC
TGATGACCACAAGGATTTCGGATTTGCAGGATTGGCTGCAGGCGCAGCCA
CAGTTGCCGCAAAATATATCCCGATTGCTTCTGCGCCGCTTTCTGCACAC
GACGCGGGGTGATCTATCCGCCGCCCAGCGACTCTTGGAACTGAATTACG
GACTGCGTAACAAACATGCACACATCTTCATCGATCGCGATCCGTTGGAT
GCCAGTTCCCAGCAGCTACTGCAAGTCGCAGATCTGGTGCCGTTGCCCGG
CTTGACCCCGGAGAACAACAAGCTGCTCTTTTACCGCCTCATCGACTTCG
ATGCGGACAAGTTCAACTTTACGGCTGCCATCAAGGTCTTTTTCATGGTG
GCCGACTGTCGATTTGCGACGGAGAACGAGGAGCGTTTGTCGGACGGCGA
GATACCAGTTTTCGACATGGCTGGCTATACGCTGCGCCACCTGACCAAAA
CCGCACTGGGCGCCCTGCGTGTCTACATGAAGTTCGTCCAGGAGGCACAT
CCCGTACGGCTCAAGGAGATCCACGTGCTCAACTGCCCGTCGTATGTGGA
CAAGGTGATGGCCGTGGTCAAGCCGTTCATCAAGGGAGAGGTGTTCAAGC
TAATCCATTTCCATTTGCCAAATGCGGACACTCCATATCGGCACTTCCCG
CGATCCATGTTGCCGGAGGAATACGGCGGGGAGGCGGGCAAGATGTCCGA
CCTGAAGCTCCAGTGGATGCAGTTGCTCAAGGAGCAGAGGGATTATCTGA
TGGATACGGAAAACTGGCAAATAAACAAAATCAAAAAGAATGGCCAACGA
AAGTCAAGTGATTCCGGAGTCACAGAAGGTCTACGTTCCCTCGAAATTGA
TGCAAGCTTTCTAGACCAT

BO14926.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:22:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG3823-RA 888 CG3823-PA 1..885 17..901 4425 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:22:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG3823-RA 1282 CG3823-RA 142..1031 12..901 4435 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:22:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6305864..6306294 360..790 2155 100 Plus
X 23542271 X 6304717..6304876 120..279 800 100 Plus
X 23542271 X 6306381..6306494 788..901 570 100 Plus
X 23542271 X 6304116..6304223 12..119 525 99.1 Plus
X 23542271 X 6305684..6305765 280..361 410 100 Plus
Blast to na_te.dros performed on 2014-11-26 22:22:30 has no hits.

BO14926.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:03 Download gff for BO14926.complete
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 1..888 17..902 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:35:39 Download gff for BO14926.complete
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 127..1016 12..901 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:55:55 Download gff for BO14926.complete
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 147..1031 17..903 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:03 Download gff for BO14926.complete
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 127..1016 12..901 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:59:06 Download gff for BO14926.complete
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 147..1031 17..903 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:59:06 Download gff for BO14926.complete
Subject Subject Range Query Range Percent Splice Strand
X 6304717..6304876 120..279 100 -> Plus
X 6305684..6305765 280..361 100 -> Plus
X 6304121..6304223 17..119 100 -> Plus
X 6305866..6306293 362..789 100 -> Plus
X 6306383..6306494 790..903 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:55:55 Download gff for BO14926.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6198154..6198256 17..119 100 -> Plus
arm_X 6198750..6198909 120..279 100 -> Plus
arm_X 6199717..6199798 280..361 100 -> Plus
arm_X 6199899..6200326 362..789 100 -> Plus
arm_X 6200416..6200527 790..903 98   Plus

BO14926.pep Sequence

Translation from 16 to 919

> BO14926.pep
MVHLNEKAEDQLMTTRISDLQDWLQAQPQLPQNISRLLLRRFLHTTRGDL
SAAQRLLELNYGLRNKHAHIFIDRDPLDASSQQLLQVADLVPLPGLTPEN
NKLLFYRLIDFDADKFNFTAAIKVFFMVADCRFATENEERLSDGEIPVFD
MAGYTLRHLTKTALGALRVYMKFVQEAHPVRLKEIHVLNCPSYVDKVMAV
VKPFIKGEVFKLIHFHLPNADTPYRHFPRSMLPEEYGGEAGKMSDLKLQW
MQLLKEQRDYLMDTENWQINKIKKNGQRKSSDSGVTEGLRSLEIDASFLD
H

BO14926.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:21:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG3823-PA 295 CG3823-PA 1..295 1..295 1536 100 Plus
CG3191-PC 309 CG3191-PC 38..302 17..277 684 46.8 Plus
CG3191-PA 309 CG3191-PA 38..302 17..277 684 46.8 Plus
CG3091-PC 303 CG3091-PC 25..292 16..269 589 39.9 Plus
CG3091-PA 303 CG3091-PA 25..292 16..269 589 39.9 Plus