Clone Sequence Records
BO14929.3prime Sequence
914 bp (777 high quality bases) assembled on 2006-05-29
> BO14929.3prime
ATGGTCTAGAAAGCTTGCGTTCTGGCTGGGATCGCTGGAGGTGCTGGAGT
CCAGGTGCAATGCCTTCTCCAAGGACTTATAATCGTTCGAGATCTCGACG
GCGTTGTTGAGATCGTTCATCATGGTAGCGATGAGACCCTGGTGCTCCTG
TTGCATTTTGTCTTGGATACGCCTGTTTTCCTCCGCCTGGCGAAGAATCA
AGGACTTGAAGCGATTCTTTTGAATTTGCTCTTCGTCCTGCACATATCCT
GGTCTTTTATAGACCGGCACTGGAGTCCTGATGCTTTTCGGCACATTCAA
GTGGCTGGTATCAGGCAGAGGTTTCTGTTTGACTGAGGAAATCTGGCCCC
TGCTCACCAGAATTTTTCGCTTGGCAGCCACTTTGGCGTCATAGGTGCGT
CGGGCCTGGTAGGCACTCTGGGTTTTGGTGACACTGGCACTGTTGGCCAC
ATGGCTGGTAATCAGTTTCGGGATTCGACTGGGACTCCTGATTGTCGTAA
GCTTATTGGGTTGCTGCTGCTCGATACCTTGTACACTTTGTGGCTCACAT
TTTATAGGCAAAGTAAACTGTGACTTGGGAATCTGCATCAGATCTCTTCG
CCACAGTTGGTGATGAAGCTTCGAAAGATCAGGACTGGTAGAGCTCCGAT
GAAGTGGTTCCAGGACATTCTCCGTTGGCTTGGGTTTCTCCGCCTTCGGT
GGATCCAACTTGGTCACCCAAACACTCTCTGCTGTGGCCAACTTCACGGG
TGTCAGCGTGACAACAACTCTTTGCGGCGGAGTCAGAGAAGCATCCTCCA
TTACCAGCTGAGAAGTCATCCCCATTGGCATGCTAGGCGGAGCAGAAATC
TGCATGGTCATCTCGGCTGTGTGATCATAGATCATTGTCTCCGATTGCTG
TAATCTCTGGCGGA
BO14929.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2267-PA | 1173 | CG2267-RA | 275..1170 | 914..19 | 4455 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:39:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2267-RB | 1731 | CG2267-RB | 469..1364 | 914..19 | 4465 | 99.9 | Minus |
| CG2267-RA | 1734 | CG2267-RA | 472..1367 | 914..19 | 4465 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:39:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30627608..30628503 | 19..914 | 4465 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:39:51 has no hits.
BO14929.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:38:26 Download gff for
BO14929.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2267-PA | 276..1173 | 16..913 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:38:28 Download gff for
BO14929.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2267-PA | 276..1173 | 16..913 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:51:09 Download gff for
BO14929.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2267-RA | 473..1367 | 19..913 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:57:29 Download gff for
BO14929.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2267-RA | 473..1367 | 19..913 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:57:29 Download gff for
BO14929.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30627608..30628502 | 19..913 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:51:09 Download gff for
BO14929.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26453330..26454224 | 19..913 | 99 | | Plus |
BO14929.5prime Sequence
857 bp (854 high quality bases) assembled on 2006-05-29
> BO14929.5prime
GAAGTTATCAGTCGACATGGCCGGAGAAACAGAGCAGCTAACGTTGCTTA
GTGAACTGAACAATATTGGAGGTGGCGAGTTCGAGTCGGGATACTGCCTG
AATGAGAAACCTATTCTGCCGCCAGTGATGACTGACTGGAAGAGACTGGA
AATGATGCGACTGCGCTTGTGCGCCTTAACCAAGGAGGTGGTCCAGAAGA
GGAACCAGATTACAAATCCTGAACGGAGGGATGCATCTACCAATACAAAA
TCGCAACAAGGATTTGGTTGTCCGGTCATAATGGGACGCTTCCGCCAGAG
ATTACAGCAATCGGAGACAATGATCTATGATCACACAGCCGAGATGACCA
TGCAGATTTCTGCTCCGCCTAGCATGCCAATTGGGATGACTTCTCAGCTG
GTAATGGAGGATGCTTCTCTGACTCCGCCGCAAAGAGTTGTTGTCACGCT
GACACCCGTGAAGTTGGCCACAGCAGAGAGTGTTTGGGTGACCAAGTTGG
ATCCACCGAAGGCGGAGAAACCCAAGCCAACGGAGAATGTCCTGGAACCA
CTTCATCGGAGCTCTACCAGTCCTGATCTTTCGAAGCTTCATCACCAACT
GTGGCGAAGAGATCTGATGCAGATTCCCAAGTCACAGTTTACTTTGCCTA
TAAAATGTGAGCCACAAAGTGTACAAGGTATCGAGCAGCAGCAACCCAAT
AAGCTTACGACAATCAGGAGTCCCAGTCGAATCCCGAAACTGATTACCAG
CCATGTGGCCAACAGTGCCAGTGTCACCAAAACCCAGAGTGCCTACCANG
CCCGACGCACCTATGACGCCAAAGTGGCTGCCAAGCGAAAAATTCTGGTG
AGCAGGG
BO14929.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2267-PA | 1173 | CG2267-RA | 1..841 | 17..857 | 4186 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:19:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2267-RA | 1734 | CG2267-RA | 196..1038 | 15..857 | 4204 | 99.9 | Plus |
| CG2267-RB | 1731 | CG2267-RB | 196..1035 | 15..857 | 4149 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:19:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30627937..30628667 | 857..127 | 3644 | 99.9 | Minus |
| 3R | 32079331 | 3R | 30628721..30628833 | 127..15 | 565 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 05:19:52 has no hits.
BO14929.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:38:27 Download gff for
BO14929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2267-PA | 1..841 | 17..857 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:38:29 Download gff for
BO14929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2267-PA | 1..841 | 17..857 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:55:49 Download gff for
BO14929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2267-RA | 191..1038 | 8..857 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:30:54 Download gff for
BO14929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2267-RA | 191..1038 | 8..857 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:30:54 Download gff for
BO14929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30627937..30628666 | 128..857 | 99 | <- | Minus |
| 3R | 30628721..30628838 | 8..127 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:55:49 Download gff for
BO14929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26453659..26454388 | 128..857 | 99 | <- | Minus |
| arm_3R | 26454443..26454560 | 8..127 | 96 | | Minus |
BO14929.complete Sequence
1204 bp (1204 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633283
> BO14929.complete
GAAGTTATCAGTCGACATGGCCGGAGAAACAGAGCAGCTAACGTTGCTTA
GTGAACTGAACAATATTGGAGGTGGCGAGTTCGAGTCGGGATACTGCCTG
AATGAGAAACCTATTCTGCCGCCAGTGATGACTGACTGGAAGAGACTGGA
AATGATGCGACTGCGCTTGTGCGCCTTAACCAAGGAGGTGGTCCAGAAGA
GGAACCAGATTACAAATCCTGAACGGAGGGATGCATCTACCAATACAAAA
TCGCAACAAGGATTTGGTTGTCCGGTCATAATGGGACGCTTCCGCCAGAG
ATTACAGCAATCGGAGACAATGATCTATGATCACACAGCCGAGATGACCA
TGCAGATTTCTGCTCCGCCTAGCATGCCAATTGGGATGACTTCTCAGCTG
GTAATGGAGGATGCTTCTCTGACTCCGCCGCAAAGAGTTGTTGTCACGCT
GACACCCGTGAAGTTGGCCACAGCAGAGAGTGTTTGGGTGACCAAGTTGG
ATCCACCGAAGGCGGAGAAACCCAAGCCAACGGAGAATGTCCTGGAACCA
CTTCATCGGAGCTCTACCAGTCCTGATCTTTCGAAGCTTCATCACCAACT
GTGGCGAAGAGATCTGATGCAGATTCCCAAGTCACAGTTTACTTTGCCTA
TAAAATGTGAGCCACAAAGTGTACAAGGTATCGAGCAGCAGCAACCCAAT
AAGCTTACGACAATCAGGAGTCCCAGTCGAATCCCGAAACTGATTACCAG
CCATGTGGCCAACAGTGCCAGTGTCACCAAAACCCAGAGTGCCTACCAGG
CCCGACGCACCTATGACGCCAAAGTGGCTGCCAAGCGAAAAATTCTGGTG
AGCAGGGGCCAGATTTCCTCAGTCAAACAGAAACCTCTGCCTGATACCAG
CCACTTGAATGTGCCGAAAAGCATCAGGACTCCAGTGCCGGTCTATAAAA
GACCAGGATATGTGCAGGACGAAGAGCAAATTCAAAAGAATCGCTTCAAG
TCCTTGATTCTTCGCCAGGCGGAGGAAAACAGGCGTATCCAAGACAAAAT
GCAACAGGAGCACCAGGGTCTCATCGCTACCATGATGAACGATCTCAACA
ACGCCGTCGAGATCTCGAACGATTATAAGTCCTTGGAGAAGGCATTGCAC
CTGGACTCCAGCACCTCCAGCGATCCCAGCCAGAACGCAAGCTTTCTAGA
CCAT
BO14929.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:32:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2267-RA | 1173 | CG2267-PA | 1..1170 | 17..1186 | 5850 | 100 | Plus |
| CG2267-RB | 1170 | CG2267-PB | 1..1167 | 17..1186 | 5770 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:32:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2267-RA | 1734 | CG2267-RA | 196..1367 | 15..1186 | 5860 | 100 | Plus |
| CG2267-RB | 1731 | CG2267-RB | 196..1364 | 15..1186 | 5780 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:32:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30627608..30628667 | 1186..127 | 5300 | 100 | Minus |
| 3R | 32079331 | 3R | 30628721..30628833 | 127..15 | 565 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:32:47 has no hits.
BO14929.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:17:06 Download gff for
BO14929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2267-RA | 1..1173 | 17..1189 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:35:44 Download gff for
BO14929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2267-RA | 191..1367 | 8..1186 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:58:33 Download gff for
BO14929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2267-RA | 198..1367 | 17..1188 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:17:06 Download gff for
BO14929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2267-RA | 191..1367 | 8..1186 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:20:56 Download gff for
BO14929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2267-RA | 198..1367 | 17..1188 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:20:56 Download gff for
BO14929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30627605..30628666 | 128..1188 | 99 | <- | Minus |
| 3R | 30628721..30628831 | 17..127 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:58:33 Download gff for
BO14929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26453327..26454388 | 128..1188 | 99 | <- | Minus |
| arm_3R | 26454443..26454553 | 17..127 | 100 | | Minus |
BO14929.pep Sequence
Translation from 16 to 1204
> BO14929.pep
MAGETEQLTLLSELNNIGGGEFESGYCLNEKPILPPVMTDWKRLEMMRLR
LCALTKEVVQKRNQITNPERRDASTNTKSQQGFGCPVIMGRFRQRLQQSE
TMIYDHTAEMTMQISAPPSMPIGMTSQLVMEDASLTPPQRVVVTLTPVKL
ATAESVWVTKLDPPKAEKPKPTENVLEPLHRSSTSPDLSKLHHQLWRRDL
MQIPKSQFTLPIKCEPQSVQGIEQQQPNKLTTIRSPSRIPKLITSHVANS
ASVTKTQSAYQARRTYDAKVAAKRKILVSRGQISSVKQKPLPDTSHLNVP
KSIRTPVPVYKRPGYVQDEEQIQKNRFKSLILRQAEENRRIQDKMQQEHQ
GLIATMMNDLNNAVEISNDYKSLEKALHLDSSTSSDPSQNASFLDH
BO14929.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:20:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2267-PA | 390 | CG2267-PA | 1..390 | 1..390 | 1998 | 100 | Plus |
| CG2267-PB | 389 | CG2267-PB | 1..389 | 1..390 | 1982 | 99.7 | Plus |
