Clone Sequence Records
BO14950.3prime Sequence
428 bp (427 high quality bases) assembled on 2006-05-29
> BO14950.3prime
ATGGTCTAGAAAGCTTGCAGCGAAGTGCTCCAGATGGTCTTGCATGTAGG
TGACTAGCGTCTTCTCGAACAGAGGGCCCATTAATCGATCCAGTTTGAGA
TTAAGGCTCACGTAGAACTGGCGGCAGTAGCGTTTACTCAATTTGGCGGC
CAGAACAGATGAGTCGGTCTGCCCGTGTCCGCCCAGGATTGTGGAGGATA
GGGACTGGCTGCTGGCGGGATTGCGAGAGGGCATGGCCACCGCTAGCTCC
TCGAAAACCTCCAATCCCTTGGGGTTTATGATCAGCATGGTGCTGCCTTG
CATTTTCAGGGCGCGCACGGTGAATTGCGAGGGACCCGCCGCCAAGTGGA
CGCAATGTGAGGTGAAACCACCAGACTCCTTCGCAGGCACAACATTCGCA
GGAACGCTATCCATGTCGACTGATAACT
BO14950.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13319-PA | 399 | CG13319-RA | 1..396 | 414..19 | 1980 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:19:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13319-RB | 687 | CG13319-RB | 46..441 | 414..19 | 1980 | 100 | Minus |
CG13319-RA | 691 | CG13319-RA | 46..441 | 414..19 | 1980 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:19:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12923949..12924344 | 414..19 | 1980 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:19:05 has no hits.
BO14950.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:38:59 Download gff for
BO14950.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-PA | 1..399 | 16..414 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:39:10 Download gff for
BO14950.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-PA | 1..399 | 16..414 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 23:03:41 Download gff for
BO14950.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 37..441 | 19..423 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:54:25 Download gff for
BO14950.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 37..441 | 19..423 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:54:25 Download gff for
BO14950.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12923940..12924344 | 19..423 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 23:03:41 Download gff for
BO14950.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8811445..8811849 | 19..423 | 99 | | Minus |
BO14950.5prime Sequence
428 bp (427 high quality bases) assembled on 2006-05-29
> BO14950.5prime
GAAGTTATCAGTCGACATGGATAGCGTTCCTGCGAATGTTGTGCCTGCGA
AGGAGTCTGGTGGTTTCACCTCACATTGCGTCCACTTGGCGGCGGGTCCC
TCGCAATTCACCGTGCGCGCCCTGAAAATGCAAGGCAGCACCATGCTGAT
CATAAACCCCAAGGGATTGGAGGTTTTCGAGGAGCTAGCGGTGGCCATGC
CCTCTCGCAATCCCGCCAGCAGCCAGTCCCTATCCTCCACAATCCTGGGC
GGACACGGGCAGACCGACTCATCTGTTCTGGCCGCCAAATTGAGTAAACG
CTACTGCCGCCAGTTCTACGTGAGCCTTAATCTCAAACTGGATCGATTAA
TGGGCCCTCTGTTCGAGAAGACGCTAGTCACCTACATGCAAGACCATCTG
GAGCACTTCGCTGCAAGCTTTCTAGACC
BO14950.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13319-PA | 399 | CG13319-RA | 1..396 | 17..412 | 1980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:54:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13319-RB | 687 | CG13319-RB | 46..441 | 17..412 | 1980 | 100 | Plus |
CG13319-RA | 691 | CG13319-RA | 46..441 | 17..412 | 1980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:54:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12923949..12924344 | 17..412 | 1980 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:54:17 has no hits.
BO14950.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:39:00 Download gff for
BO14950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-PA | 1..399 | 17..415 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:39:11 Download gff for
BO14950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-PA | 1..399 | 17..415 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:51:54 Download gff for
BO14950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 37..441 | 8..412 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:52:02 Download gff for
BO14950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 37..441 | 8..412 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:52:02 Download gff for
BO14950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12923940..12924344 | 8..412 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:51:54 Download gff for
BO14950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8811445..8811849 | 8..412 | 99 | | Plus |
BO14950.complete Sequence
430 bp (430 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633294
> BO14950.complete
GAAGTTATCAGTCGACATGGATAGCGTTCCTGCGAATGTTGTGCCTGCGA
AGGAGTCTGGTGGTTTCACCTCACATTGCGTCCACTTGGCGGCGGGTCCC
TCGCAATTCACCGTGCGCGCCCTGAAAATGCAAGGCAGCACCATGCTGAT
CATAAACCCCAAGGGATTGGAGGTTTTCGAGGAGCTAGCGGTGGCCATGC
CCTCTCGCAATCCCGCCAGCAGCCAGTCCCTATCCTCCACAATCCTGGGC
GGACACGGGCAGACCGACTCATCTGTTCTGGCCGCCAAATTGAGTAAACG
CTACTGCCGCCAGTTCTACGTGAGCCTTAATCTCAAACTGGATCGATTAA
TGGGCCCTCTGTTCGAGAAGACGCTAGTCACCTACATGCAAGACCATCTG
GAGCACTTCGCTGCAAGCTTTCTAGACCAT
BO14950.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:42:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13319-RB | 399 | CG13319-PB | 1..396 | 17..412 | 1980 | 100 | Plus |
CG13319-RA | 399 | CG13319-PA | 1..396 | 17..412 | 1980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:42:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13319-RB | 687 | CG13319-RB | 46..441 | 17..412 | 1980 | 100 | Plus |
CG13319-RA | 691 | CG13319-RA | 46..441 | 17..412 | 1980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:42:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12923949..12924344 | 17..412 | 1980 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:42:23 has no hits.
BO14950.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:54:37 Download gff for
BO14950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 1..399 | 17..415 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:26:53 Download gff for
BO14950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 37..441 | 8..412 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:13:11 Download gff for
BO14950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 46..441 | 17..414 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:54:37 Download gff for
BO14950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 37..441 | 8..412 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:43 Download gff for
BO14950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 46..441 | 17..414 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:43 Download gff for
BO14950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12923949..12924344 | 17..414 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:13:11 Download gff for
BO14950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8811454..8811849 | 17..414 | 99 | | Plus |
BO14950.pep Sequence
Translation from 16 to 430
> BO14950.pep
MDSVPANVVPAKESGGFTSHCVHLAAGPSQFTVRALKMQGSTMLIINPKG
LEVFEELAVAMPSRNPASSQSLSSTILGGHGQTDSSVLAAKLSKRYCRQF
YVSLNLKLDRLMGPLFEKTLVTYMQDHLEHFAASFLDH
BO14950.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:21:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13319-PB | 132 | CG13319-PB | 1..132 | 1..132 | 671 | 100 | Plus |
CG13319-PA | 132 | CG13319-PA | 1..132 | 1..132 | 671 | 100 | Plus |