Clone Sequence Records
BO14951.3prime Sequence
797 bp (725 high quality bases) assembled on 2006-05-29
> BO14951.3prime
ATGGTCTAGAAAGCTTGCGGATTTCTTCATGCGGTAATAGTTCCAAACCA
CGCACATGGGCGGCTGGTTGATGCAGAAGCAATGCGTCGGCGGAACATCG
GGAAGCGGATACGGTTGGCACTCCGAAAAGCTGGGATACTTGGTCCGGGG
GCGAACGCAATTGGAGGGGGGGCGTCCTGGCCGGCAGCCGGTCGTAATGG
CCTGCTTGCAGAAGGGCATCTTGAACCTGGGGCAGGAGCTCTTCGCTGGC
TTCGGGCGGCAAAGCCCCAGCCCAAGGCTCTTGTTGCCTTTGGAGCAAAC
CTTCGAAGGATGGAGCGGCAGAGTTCGAAGGCTCCGTCGATGAATTTTGG
GCGGACGGGACCGGCAAACGGCCTTCCTTTTGCGCTCCTGCAGCTCGCAC
TCGCACCAGGTGCGCTGGTACTTGCGATTCAGCTTATCGGTGGGCTTGTA
GAACATGAGGTCAGACGGCGGATAGGCCATCGCACAGCGATCGGACAGGC
ATCTTTTACGGGAGTCAATAAAGGCCGGCACGTTGAACTCGGGGTCGGAA
CGGCACTTGTACTCACTGCGCCGCATCGACATCCAGCAGATGTCCTTGAC
CGGCACCTTGGTGTTGTCCGCGGGATCATTCTTTTTCAGATCCTTTCGTT
CGGTGGCCATCGTGGGCGCACCAAATTCATACGGATCGAACAACGACTCC
ATGCGCACCTGAATGGTCCTTGACGTCAATCCACTCCTTATGGCAACCGG
TGCTCGGGAGAGCGTGTTCTTGGCCAGCATCATGTCGACTGATAACT
BO14951.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30362-PA | 768 | CG30362-RA | 1..765 | 783..19 | 3825 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:48:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| boly-RA | 1139 | CG30362-RA | 304..1068 | 783..19 | 3825 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:48:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8365621..8366385 | 19..783 | 3825 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 15:48:41 has no hits.
BO14951.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:39:01 Download gff for
BO14951.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30362-PA | 1..768 | 18..783 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:39:12 Download gff for
BO14951.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30362-PA | 1..768 | 18..783 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:31:42 Download gff for
BO14951.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boly-RA | 304..1073 | 11..783 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:32:30 Download gff for
BO14951.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boly-RA | 304..1073 | 11..783 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:32:30 Download gff for
BO14951.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8365616..8366385 | 11..783 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:31:42 Download gff for
BO14951.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4253121..4253890 | 11..783 | 99 | | Plus |
BO14951.5prime Sequence
797 bp (796 high quality bases) assembled on 2006-05-29
> BO14951.5prime
GAAGTTATCAGTCGACATGATGCTGGCCAAGAACACGCTCTCCCGAGCAC
CGGTTGCCATAAGGAGTGGATTGACGTCAAGGACCATTCAGGTGCGCATG
GAGTCGTTGTTCGATCCGTATGAATTTGGTGCGCCCACGATGGCCACCGA
ACGAAAGGATCTGAAAAAGAATGATCCCGCGGACAACACCAAGGTGCCGG
TCAAGGACATCTGCTGGATGTCGATGCGGCGCAGTGAGTACAAGTGCCGT
TCCGACCCCGAGTTCAACGTGCCGGCCTTTATTGACTCCCGTAAAAGATG
CCTGTCCGATCGCTGTGCGATGGCCTATCCGCCGTCTGACCTCATGTTCT
ACAAGCCCACCGATAAGCTGAATCGCAAGTACCAGCGCACCTGGTGCGAG
TGCGAGCTGCAGGAGCGCAAAAGGAAGGCCGTTTGCCGGTCCCGTCCGCC
CAAAATTCATCGACGGAGCCTTCGAACTCTGCCGCTCCATCCTTCGAAGG
TTTGCTCCAAAGGCAACAAGAGCCTTGGGCTGGGGCTTTGCCGCCCGAAG
CCAGCGAAGAGCTCCTGCCCCAGGTTCAAGATGCCCTTCTGCAAGCAGGC
CATTACGACCGGCTGCCGGCCAGGACGCCCCCCCTCCAATTGCGTTCGCC
CCCGGACCAAGTATCCCAGCTTTTCGGAGTGCCAACCGTATCCGCTTCCC
GATGTTCCGCCGACGCATTGCTTCTGCATCAACCAGCCGCCCATGTGCGT
GGTTTGGAACTATTACCGCATGAAGAAATCCGCAAGCTTTCTAGACC
BO14951.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:29:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30362-PA | 768 | CG30362-RA | 1..765 | 17..781 | 3825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:55:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| boly-RA | 1139 | CG30362-RA | 304..1068 | 17..781 | 3825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:55:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8365621..8366385 | 781..17 | 3825 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:55:36 has no hits.
BO14951.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:39:02 Download gff for
BO14951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30362-PA | 1..768 | 17..782 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:39:14 Download gff for
BO14951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30362-PA | 1..768 | 17..782 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:32:33 Download gff for
BO14951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boly-RA | 304..1073 | 17..789 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:09:55 Download gff for
BO14951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boly-RA | 304..1073 | 17..789 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:09:55 Download gff for
BO14951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8365616..8366385 | 17..789 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:32:33 Download gff for
BO14951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4253121..4253890 | 17..789 | 99 | | Minus |
BO14951.complete Sequence
799 bp assembled on 2007-10-17
GenBank Submission: FJ633295
> BO14951.complete
GAAGTTATCAGTCGACATGATGCTGGCCAAGAACACGCTCTCCCGAGCAC
CGGTTGCCATAAGGAGTGGATTGACGTCAAGGACCATTCAGGTGCGCATG
GAGTCGTTGTTCGATCCGTATGAATTTGGTGCGCCCACGATGGCCACCGA
ACGAAAGGATCTGAAAAAGAATGATCCCGCGGACAACACCAAGGTGCCGG
TCAAGGACATCTGCTGGATGTCGATGCGGCGCAGTGAGTACAAGTGCCGT
TCCGACCCCGAGTTCAACGTGCCGGCCTTTATTGACTCCCGTAAAAGATG
CCTGTCCGATCGCTGTGCGATGGCCTATCCGCCGTCTGACCTCATGTTCT
ACAAGCCCACCGATAAGCTGAATCGCAAGTACCAGCGCACCTGGTGCGAG
TGCGAGCTGCAGGAGCGCAAAAGGAAGGCCGTTTGCCGGTCCCGTCCGCC
CAAAATTCATCGACGGAGCCTTCGAACTCTGCCGCTCCATCCTTCGAAGG
TTTGCTCCAAAGGCAACAAGAGCCTTGGGCTGGGGCTTTGCCGCCCGAAG
CCAGCGAAGAGCTCCTGCCCCAGGTTCAAGATGCCCTTCTGCAAGCAGGC
CATTACGACCGGCTGCCGGCCAGGACGCCCCCCCTCCAATTGCGTTCGCC
CCCGGACCAAGTATCCCAGCTTTTCGGAGTGCCAACCGTATCCGCTTCCC
GATGTTCCGCCGACGCATTGCTTCTGCATCAACCAGCCGCCCATGTGCGT
GGTTTGGAACTATTACCGCATGAAGAAATCCGCAAGCTTTCTAGACCAT
BO14951.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:29:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| boly-RA | 768 | CG30362-PA | 1..765 | 17..781 | 3825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:29:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| boly-RA | 1139 | CG30362-RA | 304..1068 | 17..781 | 3825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:29:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8365621..8366385 | 781..17 | 3825 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:29:00 has no hits.
BO14951.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:02:33 Download gff for
BO14951.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30362-RA | 1..768 | 17..782 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:15:52 Download gff for
BO14951.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30362-RA | 276..1045 | 17..789 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:31:48 Download gff for
BO14951.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boly-RA | 304..1068 | 17..783 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:41:36 Download gff for
BO14951.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30362-RA | 276..1040 | 17..783 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:19:56 Download gff for
BO14951.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boly-RA | 304..1068 | 17..783 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:19:56 Download gff for
BO14951.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8365619..8366385 | 17..783 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:31:48 Download gff for
BO14951.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4253124..4253890 | 17..783 | 99 | | Minus |
BO14951.pep Sequence
Translation from 16 to 799
> BO14951.pep
MMLAKNTLSRAPVAIRSGLTSRTIQVRMESLFDPYEFGAPTMATERKDLK
KNDPADNTKVPVKDICWMSMRRSEYKCRSDPEFNVPAFIDSRKRCLSDRC
AMAYPPSDLMFYKPTDKLNRKYQRTWCECELQERKRKAVCRSRPPKIHRR
SLRTLPLHPSKVCSKGNKSLGLGLCRPKPAKSSCPRFKMPFCKQAITTGC
RPGRPPSNCVRPRTKYPSFSECQPYPLPDVPPTHCFCINQPPMCVVWNYY
RMKKSASFLDH
BO14951.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:38:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| boly-PA | 255 | CG30362-PA | 1..255 | 1..255 | 1417 | 100 | Plus |
| CG4691-PA | 262 | CG4691-PA | 41..260 | 33..253 | 487 | 47.3 | Plus |
| CG12861-PA | 239 | CG12861-PA | 50..237 | 64..253 | 255 | 33.5 | Plus |
| CG2127-PB | 289 | CG2127-PB | 89..275 | 45..253 | 222 | 30.7 | Plus |
| CG2127-PA | 305 | CG2127-PA | 105..291 | 45..253 | 222 | 30.7 | Plus |
