Clone Sequence Records
BO14980.5prime Sequence
875 bp (807 high quality bases) assembled on 2006-05-29
> BO14980.5prime
GAAGTTATCAGTCGACATGGAGCCCGCCTCAAAAAAATCGAAAATGGGTA
AAAACGTGAAGTTTAACAACAACAAGAAGAAGTATTTCCACGCCAAGAGG
CAGACGCTCCAACCTGGGCAACGTGGATTCTTCGCCACGTGCAACATCAA
CGAGAAGGCATGTGTTCGCGAATGCTACAATTTGTTGAACCACTATGCTG
ACATACTTTACGGTTCGGAAAAGCCAGAGAATGAACCGGAAAAGAAGCAG
CCAGAGGAAGGAGCGGGTGGTGATGCGGGAGAGGATGATCCGAAGCCAGC
GGCGGGAGGCACCAGTGATGACGATGACGACTTGGAAGCAGCTGCCGCCA
AATGCCGCGAGATGCTTTCGCAGCGCAAGATGCGATTCCAGAATGTAGAC
ACCAACACCACCAACTGCGTGTTCATCCGCACCCAACTGGAGGATCCGGT
CGCCCTGGGTAAACACATCATCAACGACATAGCGACCACCGGCAAGTCCA
TGTCCCGATTTGTCCTGCGCCTGGTGCCCATCGAAGTCGTCTGCCGCGCC
AACATGCCGGACATCATCACTGCCGCCGGCGAGCTCTTCGACAAGCACTT
CCTCAAGGAGCCCACCAGCTATGGCATCATCTTCAATCATCGCTATAATC
AGCAGATCAAGCGCGACCAAATCATAACCCAACTGGCCGAGCTGGTCAAC
TCCAAGAACGTGGGTAACAAGGTGGACCTAAAGGAGGCCAAGAAATCCAT
CATCGTGGAGGTCTTGAGGGGCTGGTGTCTGCTTAGCGTGATCGACAACT
ATCTGGAGTGCAAAAAAGTTCAACCTGGGCGAGCTGGCCAATCCTAGCGA
TAAAAAATCTCCCGGCGAAAGAGAT
BO14980.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:30:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15014-PA | 975 | CG15014-RA | 1..800 | 17..816 | 4000 | 100 | Plus |
CG15014-PA | 975 | CG15014-RA | 796..858 | 813..875 | 240 | 95.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:18:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15014-RA | 1155 | CG15014-RA | 62..920 | 16..875 | 4230 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:18:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4321340..4322198 | 875..16 | 4205 | 99.5 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:18:44 has no hits.
BO14980.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:39:54 Download gff for
BO14980.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15014-PA | 1..858 | 17..875 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:40:25 Download gff for
BO14980.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15014-PA | 1..858 | 17..875 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 08:45:21 Download gff for
BO14980.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15014-RA | 62..920 | 16..875 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:08:19 Download gff for
BO14980.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15014-RA | 62..920 | 16..875 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:08:19 Download gff for
BO14980.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4321340..4322198 | 16..875 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 08:45:21 Download gff for
BO14980.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4321340..4322198 | 16..875 | 99 | | Minus |
BO14980.complete Sequence
1006 bp assembled on 2008-08-14
GenBank Submission: FJ633312
> BO14980.complete
GAAGTTATCAGTCGACATGGAGCCCGCCTCAAAAAAATCGAAAATGGGTA
AAAACGTGAAGTTTAACAACAACAAGAAGAAGTATTTCCACGCCAAGAGG
CAGACGCTCCAACCTGGGCAACGTGGATTCTTCGCCACGTGCAACATCAA
CGAGAAGGCATGTGTTCGCGAATGCTACAATTTGTTGAACCACTATGCTG
ACATACTTTACGGTTCGGAAAAGCCAGAGAATGAACCGGAAAAGAAGCAG
CCAGAGGAAGGAGCGGGTGGTGATGCGGGAGAGGATGATCCGAAGCCAGC
GGCGGGAGGCACCAGTGATGACGATGACGACTTGGAAGCAGCTGCCGCCA
AATGCCGCGAGATGCTTTCGCAGCGCAAGATGCGATTCCAGAATGTAGAC
ACCAACACCACCAACTGCGTGTTCATCCGCACCCAACTGGAGGATCCGGT
CGCCCTGGGTAAACACATCATCAACGACATAGCGACCACCGGCAAGTCCA
TGTCCCGATTTGTCCTGCGCCTGGTGCCCATCGAAGTCGTCTGCCGCGCC
AACATGCCGGACATCATCACTGCCGCCGGCGAGCTCTTCGACAAGCACTT
CCTCAAGGAGCCCACCAGCTATGGCATCATCTTCAATCATCGCTATAATC
AGCAGATCAAGCGCGACCAAATCATAACCCAACTGGCCGAGCTGGTCAAC
TCCAAGAACGTGGGTAACAAGGTGGACCTAAAGGAGGCCAAGAAATCCAT
CATCGTGGAGGTCTTGAGGGGCTGGTGTCTGCTTAGCGTGATCGACAACT
ATCTGGAGTGCAAAAAGTTCAACCTGGCCGAGCTGGCCAATCCTAGCGAT
AAAAAATCTTCCGGCGAAGGAGATTCCAAGTCGGAGACTTCAGAGGTCGC
CAATGGCAACGATAAGGAGCAAGCTGAATCTTCAGAAGAGTCCAAGTCTA
ATGACGATGAGAATAAGGACTCTACTGAGAATGACAAAGCAAGCTTTCTA
GACCAT
BO14980.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:09:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15014-RA | 975 | CG15014-PA | 1..972 | 17..988 | 4860 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:09:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15014-RA | 1155 | CG15014-RA | 62..1034 | 16..988 | 4865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:09:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4321226..4322198 | 988..16 | 4865 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:09:18 has no hits.
BO14980.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:54:58 Download gff for
BO14980.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15014-RA | 33..1008 | 16..992 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:46:31 Download gff for
BO14980.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15014-RA | 63..1034 | 17..990 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:04:48 Download gff for
BO14980.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15014-RA | 34..1005 | 17..990 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:15:22 Download gff for
BO14980.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15014-RA | 63..1034 | 17..990 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:15:22 Download gff for
BO14980.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4321224..4322197 | 17..990 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:46:31 Download gff for
BO14980.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4321224..4322197 | 17..990 | 99 | | Minus |
BO14980.pep Sequence
Translation from 16 to 1006
> BO14980.pep
MEPASKKSKMGKNVKFNNNKKKYFHAKRQTLQPGQRGFFATCNINEKACV
RECYNLLNHYADILYGSEKPENEPEKKQPEEGAGGDAGEDDPKPAAGGTS
DDDDDLEAAAAKCREMLSQRKMRFQNVDTNTTNCVFIRTQLEDPVALGKH
IINDIATTGKSMSRFVLRLVPIEVVCRANMPDIITAAGELFDKHFLKEPT
SYGIIFNHRYNQQIKRDQIITQLAELVNSKNVGNKVDLKEAKKSIIVEVL
RGWCLLSVIDNYLECKKFNLAELANPSDKKSSGEGDSKSETSEVANGNDK
EQAESSEESKSNDDENKDSTENDKASFLDH
BO14980.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 03:01:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15014-PA | 324 | CG15014-PA | 1..324 | 1..324 | 1692 | 100 | Plus |