Clone BO14980 Report

Search the DGRC for BO14980

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:149
Well:80
Vector:pDNR-Dual
Associated Gene/TranscriptCG15014-RA
Protein status:BO14980.pep: Imported from assembly
Sequenced Size:1006

Clone Sequence Records

BO14980.5prime Sequence

875 bp (807 high quality bases) assembled on 2006-05-29

> BO14980.5prime
GAAGTTATCAGTCGACATGGAGCCCGCCTCAAAAAAATCGAAAATGGGTA
AAAACGTGAAGTTTAACAACAACAAGAAGAAGTATTTCCACGCCAAGAGG
CAGACGCTCCAACCTGGGCAACGTGGATTCTTCGCCACGTGCAACATCAA
CGAGAAGGCATGTGTTCGCGAATGCTACAATTTGTTGAACCACTATGCTG
ACATACTTTACGGTTCGGAAAAGCCAGAGAATGAACCGGAAAAGAAGCAG
CCAGAGGAAGGAGCGGGTGGTGATGCGGGAGAGGATGATCCGAAGCCAGC
GGCGGGAGGCACCAGTGATGACGATGACGACTTGGAAGCAGCTGCCGCCA
AATGCCGCGAGATGCTTTCGCAGCGCAAGATGCGATTCCAGAATGTAGAC
ACCAACACCACCAACTGCGTGTTCATCCGCACCCAACTGGAGGATCCGGT
CGCCCTGGGTAAACACATCATCAACGACATAGCGACCACCGGCAAGTCCA
TGTCCCGATTTGTCCTGCGCCTGGTGCCCATCGAAGTCGTCTGCCGCGCC
AACATGCCGGACATCATCACTGCCGCCGGCGAGCTCTTCGACAAGCACTT
CCTCAAGGAGCCCACCAGCTATGGCATCATCTTCAATCATCGCTATAATC
AGCAGATCAAGCGCGACCAAATCATAACCCAACTGGCCGAGCTGGTCAAC
TCCAAGAACGTGGGTAACAAGGTGGACCTAAAGGAGGCCAAGAAATCCAT
CATCGTGGAGGTCTTGAGGGGCTGGTGTCTGCTTAGCGTGATCGACAACT
ATCTGGAGTGCAAAAAAGTTCAACCTGGGCGAGCTGGCCAATCCTAGCGA
TAAAAAATCTCCCGGCGAAAGAGAT

BO14980.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:30:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG15014-PA 975 CG15014-RA 1..800 17..816 4000 100 Plus
CG15014-PA 975 CG15014-RA 796..858 813..875 240 95.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:18:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG15014-RA 1155 CG15014-RA 62..920 16..875 4230 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:18:39
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4321340..4322198 875..16 4205 99.5 Minus
Blast to na_te.dros performed on 2015-02-13 01:18:44 has no hits.

BO14980.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:39:54 Download gff for BO14980.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15014-PA 1..858 17..875 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:40:25 Download gff for BO14980.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15014-PA 1..858 17..875 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 08:45:21 Download gff for BO14980.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15014-RA 62..920 16..875 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:08:19 Download gff for BO14980.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15014-RA 62..920 16..875 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:08:19 Download gff for BO14980.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4321340..4322198 16..875 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 08:45:21 Download gff for BO14980.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4321340..4322198 16..875 99   Minus

BO14980.complete Sequence

1006 bp assembled on 2008-08-14

GenBank Submission: FJ633312

> BO14980.complete
GAAGTTATCAGTCGACATGGAGCCCGCCTCAAAAAAATCGAAAATGGGTA
AAAACGTGAAGTTTAACAACAACAAGAAGAAGTATTTCCACGCCAAGAGG
CAGACGCTCCAACCTGGGCAACGTGGATTCTTCGCCACGTGCAACATCAA
CGAGAAGGCATGTGTTCGCGAATGCTACAATTTGTTGAACCACTATGCTG
ACATACTTTACGGTTCGGAAAAGCCAGAGAATGAACCGGAAAAGAAGCAG
CCAGAGGAAGGAGCGGGTGGTGATGCGGGAGAGGATGATCCGAAGCCAGC
GGCGGGAGGCACCAGTGATGACGATGACGACTTGGAAGCAGCTGCCGCCA
AATGCCGCGAGATGCTTTCGCAGCGCAAGATGCGATTCCAGAATGTAGAC
ACCAACACCACCAACTGCGTGTTCATCCGCACCCAACTGGAGGATCCGGT
CGCCCTGGGTAAACACATCATCAACGACATAGCGACCACCGGCAAGTCCA
TGTCCCGATTTGTCCTGCGCCTGGTGCCCATCGAAGTCGTCTGCCGCGCC
AACATGCCGGACATCATCACTGCCGCCGGCGAGCTCTTCGACAAGCACTT
CCTCAAGGAGCCCACCAGCTATGGCATCATCTTCAATCATCGCTATAATC
AGCAGATCAAGCGCGACCAAATCATAACCCAACTGGCCGAGCTGGTCAAC
TCCAAGAACGTGGGTAACAAGGTGGACCTAAAGGAGGCCAAGAAATCCAT
CATCGTGGAGGTCTTGAGGGGCTGGTGTCTGCTTAGCGTGATCGACAACT
ATCTGGAGTGCAAAAAGTTCAACCTGGCCGAGCTGGCCAATCCTAGCGAT
AAAAAATCTTCCGGCGAAGGAGATTCCAAGTCGGAGACTTCAGAGGTCGC
CAATGGCAACGATAAGGAGCAAGCTGAATCTTCAGAAGAGTCCAAGTCTA
ATGACGATGAGAATAAGGACTCTACTGAGAATGACAAAGCAAGCTTTCTA
GACCAT

BO14980.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:09:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG15014-RA 975 CG15014-PA 1..972 17..988 4860 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:09:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG15014-RA 1155 CG15014-RA 62..1034 16..988 4865 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:09:16
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4321226..4322198 988..16 4865 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:09:18 has no hits.

BO14980.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:54:58 Download gff for BO14980.complete
Subject Subject Range Query Range Percent Splice Strand
CG15014-RA 33..1008 16..992 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:46:31 Download gff for BO14980.complete
Subject Subject Range Query Range Percent Splice Strand
CG15014-RA 63..1034 17..990 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:04:48 Download gff for BO14980.complete
Subject Subject Range Query Range Percent Splice Strand
CG15014-RA 34..1005 17..990 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:15:22 Download gff for BO14980.complete
Subject Subject Range Query Range Percent Splice Strand
CG15014-RA 63..1034 17..990 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:15:22 Download gff for BO14980.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4321224..4322197 17..990 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:46:31 Download gff for BO14980.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4321224..4322197 17..990 99   Minus

BO14980.pep Sequence

Translation from 16 to 1006

> BO14980.pep
MEPASKKSKMGKNVKFNNNKKKYFHAKRQTLQPGQRGFFATCNINEKACV
RECYNLLNHYADILYGSEKPENEPEKKQPEEGAGGDAGEDDPKPAAGGTS
DDDDDLEAAAAKCREMLSQRKMRFQNVDTNTTNCVFIRTQLEDPVALGKH
IINDIATTGKSMSRFVLRLVPIEVVCRANMPDIITAAGELFDKHFLKEPT
SYGIIFNHRYNQQIKRDQIITQLAELVNSKNVGNKVDLKEAKKSIIVEVL
RGWCLLSVIDNYLECKKFNLAELANPSDKKSSGEGDSKSETSEVANGNDK
EQAESSEESKSNDDENKDSTENDKASFLDH

BO14980.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 03:01:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG15014-PA 324 CG15014-PA 1..324 1..324 1692 100 Plus