Clone BO14991 Report

Search the DGRC for BO14991

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:149
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCG6724-RA
Protein status:BO14991.pep: validated full length
Sequenced Size:1294

Clone Sequence Records

BO14991.3prime Sequence

907 bp (837 high quality bases) assembled on 2006-05-29

> BO14991.3prime
ATGGTCTAGAAAGCTTGCCTTCGTCTCCGCTTCTTCCGCTAGCGCCTTGC
GAGATTTGAATACGCGCACCGTGTTGTCGACACCACCAGATACAATGTAC
TTGGGATTGGACCAGTCGATGTCCAGGACCTTTTCACCGTGACCCAGAAG
ATCGTACAGTGGGGCCTTGGGACTCCTGCAGTCCCACAGCTTGTTCTGGT
TGTCATAAGCGCCGGAGACAAATAGGAACTCCTCCGTGGTGGACCACATG
ACGGTCTGCACCCAGGCATTGTGTCCCAGATAGGTATTCCTTACCACTGA
TCCCTGGTTTGTCCTAGGATCATAGAGCCGCAGATTCTTGTCCGCCGAAG
CAGTCAGTATCAGCCGATTCAGCTTTGAGTAGCTCGCATCGAATATGGAC
TTGTTGGTGGATATTTCGGTCTTGATGCCCTCAAGACTCAGATCCCACAC
CTTGAGTGTGTGATCCCAGCTGCCAGTTAGCAGAGTGGTAGCATCCATCC
ACTGCACGGCTGATACGCTCTCACGATGTCCCTGCAGCGTAATTTTGGGG
GTTCTCACACCGCTCTCTTTCATCCGCTTTGAGCTGCCCTCGACTGCATC
GTCCAGCTCTGCTGACCACACCTTCAACATCGTGTCCCAAGAGCCCGTGG
CAAATCTCAGACCATCCGGACTCACGCTGACACTGTCGACGCCTCGCTCG
TGGCCCTTGCACACGGAGACACATTCCACCGAGTTGGAGCCCACGTTCCA
CTGCCACAGCATGGCGGTCTGATCCTGCGATGTGGACACAAAACGTCCCG
TCTCCTCGTCCAGCGATATCCAGTCCACCGCCTTGATGGGCGCCGTGTGA
CAGAAATAGTGAGAATGTGCTTGCCCTTGTTGGTCCACAAATTCAGGGTG
TTGTCGT

BO14991.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:30:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG6724-PA 1263 CG6724-RA 428..1260 851..19 4165 100 Minus
CG6724-PA 1263 CG6724-RA 371..427 907..851 260 98.2 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:39:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG6724-RA 1535 CG6724-RA 590..1479 907..19 4410 99.8 Minus
CG6724-RB 1529 CG6724-RB 590..1473 907..19 4310 99.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:39:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10768948..10769303 553..907 1715 99.4 Plus
2L 23513712 2L 10768290..10768576 19..305 1435 100 Plus
2L 23513712 2L 10768644..10768890 306..552 1235 100 Plus
Blast to na_te.dros performed on 2015-02-10 18:39:58 has no hits.

BO14991.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:40:12 Download gff for BO14991.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6724-PA 371..1263 15..907 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:40:50 Download gff for BO14991.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6724-PA 371..1263 15..907 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:51:10 Download gff for BO14991.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6724-RA 590..1482 15..907 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:57:43 Download gff for BO14991.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6724-RA 590..1482 15..907 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:57:43 Download gff for BO14991.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 10768287..10768576 15..305 99 <- Plus
2L 10768644..10768890 306..552 100 <- Plus
2L 10768948..10769303 553..907 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:51:10 Download gff for BO14991.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10768644..10768890 306..552 100 <- Plus
arm_2L 10768287..10768576 15..305 99 <- Plus
arm_2L 10768948..10769303 553..907 99   Plus

BO14991.5prime Sequence

872 bp (722 high quality bases) assembled on 2006-05-29

> BO14991.5prime
GAAGTTATCAGTCGACATGGATGTGGATAATGGCGAGGGGCAGGTGCAGG
TGCACCTGAAGACCAAGCAGGAGCATTATGCCGTGCCTGATGTGCCGTAC
GCCATCGATGGCACCGTCACCACCGTGGAACTAAACACATTCGTGAACGC
ACTGTTGCGTCAAAAAGATGGCTCTTCCGACACTGACTTCGACTTCCTGG
TGTTCGATGAGTACCTGCGCGGCCGGCTGTGCGATCACCTGCGCGAGAAA
GCCATCAGTTTCGAGGACGCCATCGAGATCGAGTATGTGGAGCGGTTCCC
GGCGCCAGAGCCACAGGATTGCCTGCTGCACGACGACTGGGTGTCCGCGG
TGAAGGCTAGAGGAAAGTGGATCCTCTCTGGGTGCTACGACAACACCCTG
AATTTGTGGACCAACAAGGGCAAGCACATTCTCACTATTTCTGGTCACAC
GGCGCCCATCAAGGCGGTGGACTGGATATCGCTGGACGAGGAGACGGGAC
GTTTTGTGTCCACATCGCAGGATCAGACCGCCATGCTGTGGCAGTGGAAC
GTGGGCTCCAACTCGGTGGAATGTGTCTCCGTGTGCAAGGGCCACGAGCG
AGGCGTCGACAGTGTCAGCGTGAGTCCGGATGGTCTGAGATTTGCCACGG
GCTCTTGGGACACGATGTTGAAGGTGTGGTCAGCAGAGCTGGACGATGCA
CTCGAGGGCAGCTCAAAGCGGATGAAAGAGAGCGGTGTGAGAACCCCCAA
AATTACGCTGCAGGGACATCGTGAGAGCGTATCAGCCGTGCAGTGGATGG
ATGCTACCACTCTGCTAACTGGCAGCTGGGATCACACACTCAAGGTGTGG
GATCTGAGTCTTGAGGGCATCA

BO14991.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:30:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG6724-PA 1263 CG6724-RA 1..856 17..872 4030 98.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:05:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG6724-RA 1535 CG6724-RA 220..1075 17..872 4130 98.8 Plus
CG6724-RB 1529 CG6724-RB 220..1069 17..872 4030 98.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:05:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10768948..10769613 742..77 3210 98.8 Minus
2L 23513712 2L 10768761..10768890 872..743 650 100 Minus
2L 23513712 2L 10769675..10769733 75..17 280 98.3 Minus
Blast to na_te.dros performed on 2015-02-11 16:05:06 has no hits.

BO14991.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:40:13 Download gff for BO14991.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6724-PA 1..855 17..871 98   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:40:52 Download gff for BO14991.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6724-PA 1..855 17..871 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:58:36 Download gff for BO14991.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6724-RA 214..1074 9..871 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:47:03 Download gff for BO14991.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6724-RA 214..1074 9..871 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:47:03 Download gff for BO14991.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10768762..10768890 743..871 100 <- Minus
2L 10768948..10769614 76..742 98 <- Minus
2L 10769675..10769739 9..75 94   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:58:36 Download gff for BO14991.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10768762..10768890 743..871 100 <- Minus
arm_2L 10768948..10769614 76..742 98 <- Minus
arm_2L 10769675..10769739 9..75 94   Minus

BO14991.complete Sequence

1294 bp (1294 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633318

> BO14991.complete
GAAGTTATCAGTCGACATGGATGTGGATAATGGCGAGGGGCAGGTGCAGG
TGCACCTGAAGACCAAGCAGGAGCATTATGCCGTGCCTGATGTGCCGTAC
GCCATCGATGGCACCGTCACCACCGTGGAACTAAACACATTCGTGAACGC
ACTGTTGCGTCAAAAAGATGGCTCTTCCGACACTGACTTCGACTTCCTGG
TGTTCGATGAGTACCTGCGCGGCCGGCTGTGCGATCACCTGCGCGAGAAA
GCCATCAGTTTCGAGGACGCCATCGAGATCGAGTATGTGGAGCGGTTCCC
GGCGCCAGAGCCACAGGATTGCCTGCTGCACGACGACTGGGTGTCCGCGG
TGAAGGCTAGAGGAAAGTGGATCCTCTCTGGGTGCTACGACAACACCCTG
AATTTGTGGACCAACAAGGGCAAGCACATTCTCACTATTTCTGGTCACAC
GGCGCCCATCAAGGCGGTGGACTGGATATCGCTGGACGAGGAGACGGGAC
GTTTTGTGTCCACATCGCAGGATCAGACCGCCATGCTGTGGCAGTGGAAC
GTGGGCTCCAACTCGGTGGAATGTGTCTCCGTGTGCAAGGGCCACGAGCG
AGGCGTCGACAGTGTCAGCGTGAGTCCGGATGGTCTGAGATTTGCCACGG
GCTCTTGGGACACGATGTTGAAGGTGTGGTCAGCAGAGCTGGACGATGCA
GTCGAGGGCAGCTCAAAGCGGATGAAAGAGAGCGGTGTGAGAACCCCCAA
AATTACGCTGCAGGGACATCGTGAGAGCGTATCAGCCGTGCAGTGGATGG
ATGCTACCACTCTGCTAACTGGCAGCTGGGATCACACACTCAAGGTGTGG
GATCTGAGTCTTGAGGGCATCAAGACCGAAATATCCACCAACAAGTCCAT
ATTCGATGCGAGCTACTCAAAGCTGAATCGGCTGATACTGACTGCTTCGG
CGGACAAGAATCTGCGGCTCTATGATCCTAGGACAAACCAGGGATCAGTG
GTAAGGAATACCTATCTGGGACACAATGCCTGGGTGCAGACCGTCATGTG
GTCCACCACGGAGGAGTTCCTATTTGTCTCCGGCGCTTATGACAACCAGA
ACAAGCTGTGGGACTGCAGGAGTCCCAAGGCCCCACTGTACGATCTTCTG
GGTCACGGTGAAAAGGTCCTGGACATCGACTGGTCCAATCCCAAGTACAT
TGTATCTGGTGGTGTCGACAACACGGTGCGCGTATTCAAATCTCGCAAGG
CGCTAGCGGAAGAAGCGGAGACGAAGGCAAGCTTTCTAGACCAT

BO14991.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 02:06:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG6724-RA 1263 CG6724-PA 1..1260 17..1276 6165 99.3 Plus
CG6724-RB 1257 CG6724-PB 1..1254 17..1276 6040 98.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:06:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG6724-RA 1535 CG6724-RA 220..1479 17..1276 6165 99.3 Plus
CG6724-RB 1529 CG6724-RB 220..1473 17..1276 6040 98.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 02:06:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10768948..10769613 742..77 3225 98.9 Minus
2L 23513712 2L 10768290..10768576 1276..990 1435 100 Minus
2L 23513712 2L 10768644..10768890 989..743 1235 100 Minus
2L 23513712 2L 10769675..10769733 75..17 280 98.3 Minus
Blast to na_te.dros performed on 2014-11-27 02:06:44 has no hits.

BO14991.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:42 Download gff for BO14991.complete
Subject Subject Range Query Range Percent Splice Strand
CG6724-RA 1..1263 17..1280 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:35:12 Download gff for BO14991.complete
Subject Subject Range Query Range Percent Splice Strand
CG6724-RA 226..1494 9..1280 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:09:38 Download gff for BO14991.complete
Subject Subject Range Query Range Percent Splice Strand
CG6724-RA 220..1479 17..1278 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:42 Download gff for BO14991.complete
Subject Subject Range Query Range Percent Splice Strand
CG6724-RA 226..1494 9..1280 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:37:37 Download gff for BO14991.complete
Subject Subject Range Query Range Percent Splice Strand
CG6724-RA 220..1479 17..1278 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:37:37 Download gff for BO14991.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10768288..10768576 990..1278 99 <- Minus
2L 10768644..10768890 743..989 100 <- Minus
2L 10768948..10769614 76..742 98 <- Minus
2L 10769675..10769733 17..75 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:09:38 Download gff for BO14991.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10768288..10768576 990..1278 99 <- Minus
arm_2L 10768644..10768890 743..989 100 <- Minus
arm_2L 10768948..10769614 76..742 98 <- Minus
arm_2L 10769675..10769733 17..75 98   Minus

BO14991.pep Sequence

Translation from 16 to 1294

> BO14991.pep
MDVDNGEGQVQVHLKTKQEHYAVPDVPYAIDGTVTTVELNTFVNALLRQK
DGSSDTDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQ
DCLLHDDWVSAVKARGKWILSGCYDNTLNLWTNKGKHILTISGHTAPIKA
VDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSV
SVSPDGLRFATGSWDTMLKVWSAELDDAVEGSSKRMKESGVRTPKITLQG
HRESVSAVQWMDATTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIFDASY
SKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEE
FLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGV
DNTVRVFKSRKALAEEAETKASFLDH

BO14991.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:21:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG6724-PA 420 CG6724-PA 1..420 1..420 2233 100 Plus
CG6724-PB 418 CG6724-PB 1..418 1..420 2211 99.5 Plus
wds-PB 361 CG17437-PB 71..359 105..409 251 28.9 Plus
wds-PA 361 CG17437-PA 71..359 105..409 251 28.9 Plus
wds-PB 361 CG17437-PB 70..272 192..411 219 29.1 Plus
wds-PA 361 CG17437-PA 70..272 192..411 219 29.1 Plus
Lis-1-PG 411 CG8440-PG 123..411 119..410 217 25 Plus
wds-PB 361 CG17437-PB 63..247 243..424 156 28.4 Plus
wds-PA 361 CG17437-PA 63..247 243..424 156 28.4 Plus