Clone BO14992 Report

Search the DGRC for BO14992

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:149
Well:92
Vector:pDNR-Dual
Associated Gene/TranscriptCG10623-RA
Protein status:BO14992.pep: validated full length
Sequenced Size:1027

Clone Sequence Records

BO14992.3prime Sequence

836 bp (751 high quality bases) assembled on 2006-05-29

> BO14992.3prime
ATGGTCTAGAAAGCTTGCCGGCTTTATGTTGAGGCCATCGACGTACTTGC
GGATCGCCAACACGTCCGTCGGATAGACCCGGCAACAGCCGCCAACGATG
CGCACTCCCAGCTGGATCCACTCGGGCACAAACTTGACCACCTCCTCGCC
GGTTCCAGTCCAATCTCCCTGCTCGACGTCGTAGATCTCGCCGCGATTGC
TGTAGACCACCAGTGGGATGCGATCCGAACCGGCCACTTTGGTAAGCGAT
GATAGCAAAGGGGTCACGAATAGTGGGTTTACACAGTTCAGACCGATCCC
AAGGAGCCGGTTTTCAGCCTTCCGACTTTGGACCAACCGCCAGAGGGAGA
GAGCCGCCTCCGCGAAGTTTTCTCCACTAGCCATGTGCTTTTCATCCATG
CACTGCAGGGAGACCCAGAATTTGGCATCCGGAAAGTTGTCCAGTACTAA
TTCGGTGACTGCCTCTGCCTCCATCAGACATGGAAGTGTTTCCAGGGCCA
ATCCATCCACTCCAGCTGCGAGACAAATCTCAATTCTTGTCTTGTGCCAC
GCCCTCAGCTCCTCCTTGGACATCTTGTCCGCATAGTTGCCGGTGTACTC
AGATCCATCGTGGAGATAGGCGCCATATGGACCTATTGAGCCCATGATCA
GTGGAAGAGCCGACTCCGCTTCAGAACCGATTTCGCTAAGGTACTGTTCC
TTTGCCTGCTTGGCCAGTTGAACGCTCTTTTGGATCAACTCCACACCTCG
TTCTCTGGTCACGCCCAGGTACTTTCACGAATCCCTCGACGCTGGACTGA
TACGTGTTGGTTAGAAAAATATCCGCTCCGTTGCGG

BO14992.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:30:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG10623-PA 996 CG10623-RA 238..993 774..19 3755 99.8 Minus
CG10623-PA 996 CG10623-RA 178..239 835..774 285 98.3 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:02:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG10623-RC 1725 CG10623-RC 444..1259 835..19 4030 99.6 Minus
CG10623-RB 1494 CG10623-RB 213..1028 835..19 4030 99.6 Minus
CG10623-RA 1583 CG10623-RA 302..1117 835..19 4030 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 13:02:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18956430..18956868 396..835 2135 99.5 Plus
2L 23513712 2L 18955947..18956325 19..397 1880 99.7 Plus
Blast to na_te.dros performed on 2015-02-08 13:02:38 has no hits.

BO14992.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:40:14 Download gff for BO14992.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10623-PA 177..996 15..836 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:40:54 Download gff for BO14992.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10623-PA 177..996 15..836 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:48:36 Download gff for BO14992.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 301..1120 15..836 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:52:06 Download gff for BO14992.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 301..1120 15..836 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:52:06 Download gff for BO14992.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 18955944..18956324 15..396 99 <- Plus
2L 18956431..18956868 397..836 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:48:36 Download gff for BO14992.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18956431..18956868 397..836 99   Plus
arm_2L 18955944..18956324 15..396 99 <- Plus

BO14992.5prime Sequence

854 bp (800 high quality bases) assembled on 2006-05-29

> BO14992.5prime
GAAGTTATCAGTCGACATGGAAGTGAATCAAAAATGGAACTGGGACACCA
AGCCAATTCTGGTCAAATGCGGAGGATTCTCCTCGCAATTGGCCAAGAAT
GTCACCGAAAAAGTGGACGGTGATCCACTGTGGGGATCGCGATTCGATGC
CACCAATCCGGAAGCTGTGATCCAAACACATCTGGACTTTCTCCGCAACG
GAGCGGATATTATTCTAACCAACACGTATCAGTCCAGCGTCGAGGGATTC
GTGAAGTACCTGGGCGTGACCAGAGAACGAGGTGTGGAGTTGATCCAAAA
GAGCGTTCAACTGGCCAAGCAGGCAAAGGAACAGTACCTTAGCGAAATCG
GTTCTGAAGCGGAGTCGGCTCTTCCACTGATCATGGGCTCAATAGGTCCA
TATGGCGCCTATCTCCACGATGGATCTGAGTACACCGGCAACTATGCGGA
CAAGATGTCCAAGGAGGAGCTGAGGGCGTGGCACAAGACAAGAATTGAGA
TTTGTCTCGCAGCTGGAGTGGATGGATTGGCCCTGGAAACACTTCCATGT
CTGATGGAGGCAGAGGCAGTCACCGAATTAGTACTGGACAACTTTCCGGA
TGCCAAATTCTGGGTCTCCCTGCAGTGCATGGATGAAAAGCACATGGCTA
GTGGAGAAAACTTCGCGGAGGCGGCTCTCTCCCTCTGGCGGTTGGTCCAA
AGTCGGAAGGCTGAAAACCGGCTCCTTGGGATCGGTCTGAACTGTGTAAA
CCCACTATTCGTGACCCCTTTGCTATCATCGCTTACCAAAGTGGCCGGTT
CGGATCGCATCCCATCGGTGGTCTACAGCAATCGCGGCAAGATCTACGAC
GTCG

BO14992.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:30:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG10623-PA 996 CG10623-RA 1..838 17..854 4065 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 08:02:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG10623-RC 1725 CG10623-RC 264..1104 14..854 4130 99.4 Plus
CG10623-RB 1494 CG10623-RB 33..873 14..854 4130 99.4 Plus
CG10623-RA 1583 CG10623-RA 122..962 14..854 4130 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 08:02:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18956430..18957048 632..14 3080 99.8 Minus
2L 23513712 2L 18956102..18956325 854..631 1060 98.2 Minus
Blast to na_te.dros performed on 2015-02-02 08:02:13 has no hits.

BO14992.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:40:15 Download gff for BO14992.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10623-PA 1..838 17..854 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:40:55 Download gff for BO14992.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10623-PA 1..838 17..854 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:46:09 Download gff for BO14992.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 122..962 14..854 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:16:59 Download gff for BO14992.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 122..962 14..854 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:16:59 Download gff for BO14992.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18956102..18956324 632..854 98 <- Minus
2L 18956431..18957048 14..631 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:46:09 Download gff for BO14992.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18956102..18956324 632..854 98 <- Minus
arm_2L 18956431..18957048 14..631 99   Minus

BO14992.complete Sequence

1027 bp (1027 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633319

> BO14992.complete
GAAGTTATCAGTCGACATGGAAGTGAATCAAAAATGGAACTGGGACACCA
AGCCAATTCTGGTCAAATGCGGAGGATTCTCCTCGCAATTGGCCAAGAAT
GTCACCGAAAAAGTGGACGGTGATCCACTGTGGGGATCGCGATTCGATGC
CACCAATCCGGAAGCTGTGATCCAAACACATCTGGACTTTCTCCGCAACG
GAGCGGATATTATTCTAACCAACACGTATCAGTCCAGCGTCGAGGGATTC
GTGAAGTACCTGGGCGTGACCAGAGAACGAGGTGTGGAGTTGATCCAAAA
GAGCGTTCAACTGGCCAAGCAGGCAAAGGAACAGTACCTTAGCGAAATCG
GTTCTGAAGCGGAGTCGGCTCTTCCACTGATCATGGGCTCAATAGGTCCA
TATGGCGCCTATCTCCACGATGGATCTGAGTACACCGGCAACTATGCGGA
CAAGATGTCCAAGGAGGAGCTGAGGGCGTGGCACAAGACAAGAATTGAGA
TTTGTCTCGCAGCTGGAGTGGATGGATTGGCCCTGGAAACACTTCCATGT
CTGATGGAGGCAGAGGCAGTCACCGAATTAGTACTGGACAACTTTCCGGA
TGCCAAATTCTGGGTCTCCCTGCAGTGCATGGATGAAAAGCACATGGCTA
GTGGAGAAAACTTCGCGGAGGCGGCTCTCTCCCTCTGGCGGTTGGTCCAA
AGTCGGAAGGCTGAAAACCGGCTCCTTGGGATCGGTCTGAACTGTGTAAA
CCCACTATTCGTGACCCCTTTGCTATCATCGCTTACCAAAGTGGCCGGTT
CGGATCGCATCCCACTGGTGGTCTACAGCAATCGCGGCGAGATCTACGAC
GTCGAGCAGGGAGATTGGACTGGAACCGGCGAGGAGGTGGTCAAGTTTGT
GCCCGAGTGGATCCAGCTGGGAGTGCGCATCGTTGGCGGCTGTTGCCGGG
TCTATCCGACGGACGTGTTGGCGATCCGCAAGTACGTCGATGGCCTCAAC
ATAAAGCCGGCAAGCTTTCTAGACCAT

BO14992.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:49:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG10623-RC 996 CG10623-PC 1..993 17..1009 4935 99.8 Plus
CG10623-RB 996 CG10623-PB 1..993 17..1009 4935 99.8 Plus
CG10623-RA 996 CG10623-PA 1..993 17..1009 4935 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:49:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG10623-RC 1725 CG10623-RC 264..1259 14..1009 4950 99.8 Plus
CG10623-RB 1494 CG10623-RB 33..1028 14..1009 4950 99.8 Plus
CG10623-RA 1583 CG10623-RA 122..1117 14..1009 4950 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:49:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18956430..18957048 632..14 3080 99.8 Minus
2L 23513712 2L 18955947..18956325 1009..631 1880 99.7 Minus
Blast to na_te.dros performed on 2014-11-27 14:49:12 has no hits.

BO14992.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:43 Download gff for BO14992.complete
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 1..996 17..1013 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:35:13 Download gff for BO14992.complete
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 122..1120 14..1013 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:52:35 Download gff for BO14992.complete
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 125..1117 17..1011 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:43 Download gff for BO14992.complete
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 116..1114 14..1013 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:19:21 Download gff for BO14992.complete
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 125..1117 17..1011 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:19:21 Download gff for BO14992.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18955945..18956324 632..1011 99 <- Minus
2L 18956431..18957045 17..631 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:52:35 Download gff for BO14992.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18955945..18956324 632..1011 99 <- Minus
arm_2L 18956431..18957045 17..631 99   Minus

BO14992.pep Sequence

Translation from 16 to 1027

> BO14992.pep
MEVNQKWNWDTKPILVKCGGFSSQLAKNVTEKVDGDPLWGSRFDATNPEA
VIQTHLDFLRNGADIILTNTYQSSVEGFVKYLGVTRERGVELIQKSVQLA
KQAKEQYLSEIGSEAESALPLIMGSIGPYGAYLHDGSEYTGNYADKMSKE
ELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDNFPDAKFWV
SLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVT
PLLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEEVVKFVPEWIQ
LGVRIVGGCCRVYPTDVLAIRKYVDGLNIKPASFLDH

BO14992.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:21:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG10623-PC 331 CG10623-PC 1..331 1..331 1733 100 Plus
CG10623-PB 331 CG10623-PB 1..331 1..331 1733 100 Plus
CG10623-PA 331 CG10623-PA 1..331 1..331 1733 100 Plus
CG10621-PC 331 CG10621-PC 6..325 14..328 915 53.7 Plus
CG10621-PB 331 CG10621-PB 6..325 14..328 915 53.7 Plus