Clone Sequence Records
BO14993.5prime Sequence
506 bp (505 high quality bases) assembled on 2006-05-29
> BO14993.5prime
GAAGTTATCAGTCGACATGCCGGAACACACTCCAGCTCCGACTCCCCATA
GGGCGGTCTATGGTTTCGCCTTCTATATGCTGTTCACGGTCCTCTTCCTC
GTATACGTGACTTGGGCGCTGCTGCCAGTGGAGTTTGGTCTGCACTCGTA
TCTGCCGGACAAGTATTTTGCCGTATTTGTGCCTTTTCTGGTGCTGGTCT
TCGCCTGGTTCTTTGCCTTCCTCATCTATCCTGCCATAAATCTATCGATG
ACAGTGGATGTTGATTCCATTGCCTCGGTGGTGGATCCAAAGCTGGCACT
GCCCAAGGGGACAGAGTTCACCTCCTGGTCGCAGTTGCAAAAAGGCAAGG
TCAGCCAGGATTCCGCATCAAAGAAGGCCTCTCCAGTGAACTGCAACCTG
TGCAGGACTTTCCACCAACCTGTGACACGTGCACCTATTCCACCACTGCG
TTTTCTGGACCTCCAGGAAGTAAATACAGCGTATTATAACGCAAGCTTTC
TAGACC
BO14993.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:30:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14550-PA | 477 | CG14550-RA | 1..474 | 17..490 | 2370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 08:02:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42498-RA | 814 | CG42498-RA | 338..811 | 17..490 | 2370 | 100 | Plus |
CG14550-RA | 814 | CG14550-RA | 338..811 | 17..490 | 2370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 08:01:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26057350..26057823 | 490..17 | 2370 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-02 08:02:02 has no hits.
BO14993.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:40:17 Download gff for
BO14993.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14550-PA | 1..477 | 17..494 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:40:58 Download gff for
BO14993.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14550-PA | 1..477 | 17..494 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:46:08 Download gff for
BO14993.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42498-RA | 330..814 | 9..494 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:16:57 Download gff for
BO14993.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14550-RA | 330..814 | 9..494 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:16:57 Download gff for
BO14993.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26057346..26057831 | 9..494 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:46:08 Download gff for
BO14993.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21883068..21883553 | 9..494 | 98 | | Minus |
BO14993.3prime Sequence
506 bp (505 high quality bases) assembled on 2006-05-29
> BO14993.3prime
ATGGTCTAGAAAGCTTGCGTTATAATACGCTGTATTTACTTCCTGGAGGT
CCAGAAAACGCAGTGGTGGAATAGGTGCACGTGTCACAGGTTGGTGGAAA
GTCCTGCACAGGTTGCAGTTCACTGGAGAGGCCTTCTTTGATGCGGAATC
CTGGCTGACCTTGCCTTTTTGCAACTGCGACCAGGAGGTGAACTCTGTCC
CCTTGGGCAGTGCCAGCTTTGGATCCACCACCGAGGCAATGGAATCAACA
TCCACTGTCATCGATAGATTTATGGCAGGATAGATGAGGAAGGCAAAGAA
CCAGGCGAAGACCAGCACCAGAAAAGGCACAAATACGGCAAAATACTTGT
CCGGCAGATACGAGTGCAGACCAAACTCCACTGGCAGCAGCGCCCAAGTC
ACGTATACGAGGAAGAGGACCGTGAACAGCATATAGAAGGCGAAACCATA
GACCGCCCTATGGGGAGTCGGAGCTGGAGTGTGTTCCGGCATGTCGACTG
ATAACT
BO14993.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:30:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14550-PA | 477 | CG14550-RA | 1..474 | 492..19 | 2370 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:17:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42498-RA | 814 | CG42498-RA | 338..811 | 492..19 | 2370 | 100 | Minus |
CG14550-RA | 814 | CG14550-RA | 338..811 | 492..19 | 2370 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:17:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26057350..26057823 | 19..492 | 2370 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 18:17:50 has no hits.
BO14993.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:40:16 Download gff for
BO14993.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14550-PA | 1..477 | 15..492 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:40:56 Download gff for
BO14993.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14550-PA | 1..477 | 15..492 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:31:35 Download gff for
BO14993.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42498-RA | 330..814 | 15..500 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:54:04 Download gff for
BO14993.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14550-RA | 330..814 | 15..500 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:54:04 Download gff for
BO14993.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26057346..26057831 | 15..500 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:31:35 Download gff for
BO14993.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21883068..21883553 | 15..500 | 98 | | Plus |
BO14993.complete Sequence
508 bp (508 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633320
> BO14993.complete
GAAGTTATCAGTCGACATGCCGGAACACACTCCAGCTCCGACTCCCCATA
GGGCGGTCTATGGTTTCGCCTTCTATATGCTGTTCACGGTCCTCTTCCTC
GTATACGTGACTTGGGCGCTGCTGCCAGTGGAGTTTGGTCTGCACTCGTA
TCTGCCGGACAAGTATTTTGCCGTATTTGTGCCTTTTCTGGTGCTGGTCT
TCGCCTGGTTCTTTGCCTTCCTCATCTATCCTGCCATAAATCTATCGATG
ACAGTGGATGTTGATTCCATTGCCTCGGTGGTGGATCCAAAGCTGGCACT
GCCCAAGGGGACAGAGTTCACCTCCTGGTCGCAGTTGCAAAAAGGCAAGG
TCAGCCAGGATTCCGCATCAAAGAAGGCCTCTCCAGTGAACTGCAACCTG
TGCAGGACTTTCCACCAACCTGTGACACGTGCACCTATTCCACCACTGCG
TTTTCTGGACCTCCAGGAAGTAAATACAGCGTATTATAACGCAAGCTTTC
TAGACCAT
BO14993.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:48:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14550-RA | 477 | CG14550-PA | 1..474 | 17..490 | 2370 | 100 | Plus |
CG42498-RA | 336 | CG42498-PA | 302..336 | 17..51 | 175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42498-RA | 814 | CG42498-RA | 338..811 | 17..490 | 2370 | 100 | Plus |
CG14550-RA | 814 | CG14550-RA | 338..811 | 17..490 | 2370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26057350..26057823 | 490..17 | 2370 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:48:21 has no hits.
BO14993.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:44 Download gff for
BO14993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14550-RA | 1..477 | 17..494 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:35:15 Download gff for
BO14993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14550-RA | 330..814 | 9..494 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:34:39 Download gff for
BO14993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42498-RA | 338..811 | 17..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:44 Download gff for
BO14993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14550-RA | 330..814 | 9..494 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:10:10 Download gff for
BO14993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14550-RA | 338..811 | 17..492 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:10:10 Download gff for
BO14993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26057348..26057823 | 17..492 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:34:39 Download gff for
BO14993.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21883070..21883545 | 17..492 | 99 | | Minus |
BO14993.pep Sequence
Translation from 16 to 508
> BO14993.pep
MPEHTPAPTPHRAVYGFAFYMLFTVLFLVYVTWALLPVEFGLHSYLPDKY
FAVFVPFLVLVFAWFFAFLIYPAINLSMTVDVDSIASVVDPKLALPKGTE
FTSWSQLQKGKVSQDSASKKASPVNCNLCRTFHQPVTRAPIPPLRFLDLQ
EVNTAYYNASFLDH
BO14993.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:21:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14550-PA | 158 | CG14550-PA | 1..158 | 1..158 | 841 | 100 | Plus |