Clone Sequence Records
BO14994.5prime Sequence
599 bp (598 high quality bases) assembled on 2006-05-29
> BO14994.5prime
GAAGTTATCAGTCGACATGGCCAGCAATGAGTCCGGCGGCGGTAACCTGA
TGGACGAGTTCGAGGAGGCCTTCCAGTCGTGCCTGCTGACGCTGACCAAA
CAGGAGCCGAATTCCGGGACAAACAAGGAGGAAATCGATCTGGAGGTACA
GAAGACCACAAATCGCTTCATAGACGTCGCCCGCCAAATGGAGGCGTTCT
TCCTGCAGAAGCGTTTTCTCGTCTCCACGCTGAAGCCCTACATGCTGATC
AAGGACGAGAATCAGGACCTGAGCATCGAGATTCAACGCAAGGAGGCACT
CCTGCAGAAGCACTACAATCGCCTGGAGGAGTGGAAGGCCTGCCTATCGG
ACATCCAACAGGGCGTACACAGTCGCCCCACGCCGCCCATCGGCTCTGGA
ATGCTGCAAGGTCCCGGTGGCGGAATGCCACCCATGGGAGGTACACCGCC
GCGACCGGGAATGATGCCCGGAATGCCTCCGGGTGCAATGCAACCCGGCG
GACCCATGCAGCCCAGTCCACACATGCTGCAGGCACAGCAGATGCAGCAG
CTCCGCATGATAAGCAGACAAATGCCACCCAAAGCAAGCTTTCTAGACC
BO14994.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:30:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5121-PA | 570 | MED28-RA | 1..567 | 17..583 | 2835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:52:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED28-RA | 743 | CG5121-RA | 99..666 | 16..583 | 2840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:51:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25477101..25477668 | 16..583 | 2840 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 22:51:58 has no hits.
BO14994.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:40:19 Download gff for
BO14994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED28-PA | 1..570 | 17..586 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:41:01 Download gff for
BO14994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5121-PA | 1..570 | 17..586 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:24:00 Download gff for
BO14994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED28-RA | 99..670 | 16..587 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:49:34 Download gff for
BO14994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED28-RA | 99..670 | 16..587 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:49:34 Download gff for
BO14994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25477101..25477672 | 16..587 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:24:00 Download gff for
BO14994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21302823..21303394 | 16..587 | 99 | | Plus |
BO14994.3prime Sequence
599 bp (598 high quality bases) assembled on 2006-05-29
> BO14994.3prime
ATGGTCTAGAAAGCTTGCTTTGGGTGGCATTTGTCTGCTTATCATGCGGA
GCTGCTGCATCTGCTGTGCCTGCAGCATGTGTGGACTGGGCTGCATGGGT
CCGCCGGGTTGCATTGCACCCGGAGGCATTCCGGGCATCATTCCCGGTCG
CGGCGGTGTACCTCCCATGGGTGGCATTCCGCCACCGGGACCTTGCAGCA
TTCCAGAGCCGATGGGCGGCGTGGGGCGACTGTGTACGCCCTGTTGGATG
TCCGATAGGCAGGCCTTCCACTCCTCCAGGCGATTGTAGTGCTTCTGCAG
GAGTGCCTCCTTGCGTTGAATCTCGATGCTCAGGTCCTGATTCTCGTCCT
TGATCAGCATGTAGGGCTTCAGCGTGGAGACGAGAAAACGCTTCTGCAGG
AAGAACGCCTCCATTTGGCGGGCGACGTCTATGAAGCGATTTGTGGTCTT
CTGTACCTCCAGATCGATTTCCTCCTTGTTTGTCCCGGAATTCGGCTCCT
GTTTGGTCAGCGTCAGCAGGCACGACTGGAAGGCCTCCTCGAACTCGTCC
ATCAGGTTACCGCCGCCGGACTCATTGCTGGCCATGTCGACTGATAACT
BO14994.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:30:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5121-PA | 570 | MED28-RA | 1..567 | 585..19 | 2835 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:43:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED28-RA | 743 | CG5121-RA | 99..666 | 586..19 | 2840 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:42:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25477101..25477668 | 586..19 | 2840 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:43:03 has no hits.
BO14994.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:40:18 Download gff for
BO14994.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED28-PA | 1..570 | 16..585 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:40:59 Download gff for
BO14994.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5121-PA | 1..570 | 16..585 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 23:04:26 Download gff for
BO14994.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED28-RA | 99..670 | 15..586 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:02:06 Download gff for
BO14994.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED28-RA | 99..670 | 15..586 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:02:06 Download gff for
BO14994.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25477101..25477672 | 15..586 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 23:04:26 Download gff for
BO14994.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21302823..21303394 | 15..586 | 99 | | Minus |
BO14994.complete Sequence
601 bp (601 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633321
> BO14994.complete
GAAGTTATCAGTCGACATGGCCAGCAATGAGTCCGGCGGCGGTAACCTGA
TGGACGAGTTCGAGGAGGCCTTCCAGTCGTGCCTGCTGACGCTGACCAAA
CAGGAGCCGAATTCCGGGACAAACAAGGAGGAAATCGATCTGGAGGTACA
GAAGACCACAAATCGCTTCATAGACGTCGCCCGCCAAATGGAGGCGTTCT
TCCTGCAGAAGCGTTTTCTCGTCTCCACGCTGAAGCCCTACATGCTGATC
AAGGACGAGAATCAGGACCTGAGCATCGAGATTCAACGCAAGGAGGCACT
CCTGCAGAAGCACTACAATCGCCTGGAGGAGTGGAAGGCCTGCCTATCGG
ACATCCAACAGGGCGTACACAGTCGCCCCACGCCGCCCATCGGCTCTGGA
ATGCTGCAAGGTCCCGGTGGCGGAATGCCACCCATGGGAGGTACACCGCC
GCGACCGGGAATGATGCCCGGAATGCCTCCGGGTGCAATGCAACCCGGCG
GACCCATGCAGCCCAGTCCACACATGCTGCAGGCACAGCAGATGCAGCAG
CTCCGCATGATAAGCAGACAAATGCCACCCAAAGCAAGCTTTCTAGACCA
T
BO14994.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:45:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED28-RA | 570 | CG5121-PA | 1..567 | 17..583 | 2835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:45:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED28-RA | 743 | CG5121-RA | 99..666 | 16..583 | 2840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:45:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25477101..25477668 | 16..583 | 2840 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:45:24 has no hits.
BO14994.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:45 Download gff for
BO14994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED28-RA | 1..570 | 17..586 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:35:16 Download gff for
BO14994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED28-RA | 99..670 | 16..587 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:20:57 Download gff for
BO14994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED28-RA | 100..666 | 17..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:46 Download gff for
BO14994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED28-RA | 99..670 | 16..587 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:30:00 Download gff for
BO14994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED28-RA | 100..666 | 17..585 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:30:00 Download gff for
BO14994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25477102..25477668 | 17..585 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:20:57 Download gff for
BO14994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21302824..21303390 | 17..585 | 99 | | Plus |
BO14994.pep Sequence
Translation from 16 to 601
> BO14994.pep
MASNESGGGNLMDEFEEAFQSCLLTLTKQEPNSGTNKEEIDLEVQKTTNR
FIDVARQMEAFFLQKRFLVSTLKPYMLIKDENQDLSIEIQRKEALLQKHY
NRLEEWKACLSDIQQGVHSRPTPPIGSGMLQGPGGGMPPMGGTPPRPGMM
PGMPPGAMQPGGPMQPSPHMLQAQQMQQLRMISRQMPPKASFLDH
BO14994.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:21:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED28-PA | 189 | CG5121-PA | 1..189 | 1..189 | 1001 | 100 | Plus |
