Clone Sequence Records
BO14995.3prime Sequence
590 bp (589 high quality bases) assembled on 2006-05-29
> BO14995.3prime
ATGGTCTAGAAAGCTTGCTTTTGATTTGGGTGCTTCCAGTGCGTCTTCCG
ACACCTCCCAGGGCTTCTCATGCCTCTTCTCATCCCAGGGCTGCTCGTTG
GGCAGGCGAGAGGGTTCCTTGAAGGACACCCCATTATCCTGAATGGTTTG
AAGCAGCTTCTGCAGCTTGCTACCCGGTACCGCCTCCACGTTGCAGGTCA
TTTCCGTGATCCCAGACTGCAGGCAGCGCTGTGCGAGCACTCTGCCGAGA
TTTACAAACGCAGATGTGTCGTTGGTCTTGTACAACTGCTGTTTAATGGC
CCATTCCGAGGTGCTGGCACTCAGGATGGTTCCATTCTCAAAGTGCTTGA
CATCGCCGCTGACATAGCGGCCGCTGGTGTTGATTTCCAAAGTGTGCCAG
TAGGAACGACCTGGTTTCTCCAGATGATAGCCTACCGGCTTGTAGGCAAT
GCGTAATCTTTCCAAGTTCCGTGGATTCCGGTTGATCACGTATTCAGTGC
TGGCTTGCGGGGTTGTTAATTCCTTGATTTTGTGCAGTACACGGGCGGAG
GTGAGGGGGCGAGCACTGCGAGACATGTCGACTGATAACT
BO14995.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:30:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12373-PA | 561 | mRpL18-RA | 1..558 | 576..19 | 2790 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:41:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL18-RA | 740 | CG12373-RA | 121..678 | 576..19 | 2790 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:41:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12756554..12757111 | 576..19 | 2790 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:41:24 has no hits.
BO14995.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:40:21 Download gff for
BO14995.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12373-PA | 1..561 | 15..576 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:41:02 Download gff for
BO14995.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12373-PA | 1..561 | 15..576 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 23:04:22 Download gff for
BO14995.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL18-RA | 121..681 | 15..576 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:00:03 Download gff for
BO14995.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL18-RA | 121..681 | 15..576 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:00:03 Download gff for
BO14995.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12756554..12757114 | 15..576 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 23:04:22 Download gff for
BO14995.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8644059..8644619 | 15..576 | 99 | | Minus |
BO14995.5prime Sequence
590 bp (589 high quality bases) assembled on 2006-05-29
> BO14995.5prime
GAAGTTATCAGTCGACATGTCTCGCAGTGCTCGCCCCCTCACCTCCGCCC
GTGTACTGCACAAAATCAAGGAATTAACAACCCCGCAAGCCAGCACTGAA
TACGTGATCAACCGGAATCCACGGAACTTGGAAAGATTACGCATTGCCTA
CAAGCCGGTAGGCTATCATCTGGAGAAACCAGGTCGTTCCTACTGGCACA
CTTTGGAAATCAACACCAGCGGCCGCTATGTCAGCGGCGATGTCAAGCAC
TTTGAGAATGGAACCATCCTGAGTGCCAGCACCTCGGAATGGGCCATTAA
ACAGCAGTTGTACAAGACCAACGACACATCTGCGTTTGTAAATCTCGGCA
GAGTGCTCGCACAGCGCTGCCTGCAGTCTGGGATCACGGAAATGACCTGC
AACGTGGAGGCGGTACCGGGTAGCAAGCTGCAGAAGCTGCTTCAAACCAT
TCAGGATAATGGGGTGTCCTTCAAGGAACCCTCTCGCCTGCCCAACGAGC
AGCCCTGGGATGAGAAGAGGCATGAGAAGCCCTGGGAGGTGTCGGAAGAC
GCACTGGAAGCACCCAAATCAAAAGCAAGCTTTCTAGACC
BO14995.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:30:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12373-PA | 561 | mRpL18-RA | 1..558 | 17..574 | 2790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:45:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL18-RA | 740 | CG12373-RA | 121..678 | 17..574 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:45:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12756554..12757111 | 17..574 | 2790 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 19:45:39 has no hits.
BO14995.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:40:22 Download gff for
BO14995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12373-PA | 1..561 | 17..578 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:41:03 Download gff for
BO14995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12373-PA | 1..561 | 17..578 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:09:46 Download gff for
BO14995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL18-RA | 121..681 | 17..578 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:53:57 Download gff for
BO14995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL18-RA | 121..681 | 17..578 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 00:53:57 Download gff for
BO14995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12756554..12757114 | 17..578 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:09:46 Download gff for
BO14995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8644059..8644619 | 17..578 | 99 | | Plus |
BO14995.complete Sequence
592 bp (592 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633322
> BO14995.complete
GAAGTTATCAGTCGACATGTCTCGCAGTGCTCGCCCCCTCACCTCCGCCC
GTGTACTGCACAAAATCAAGGAATTAACAACCCCGCAAGCCAGCACTGAA
TACGTGATCAACCGGAATCCACGGAACTTGGAAAGATTACGCATTGCCTA
CAAGCCGGTAGGCTATCATCTGGAGAAACCAGGTCGTTCCTACTGGCACA
CTTTGGAAATCAACACCAGCGGCCGCTATGTCAGCGGCGATGTCAAGCAC
TTTGAGAATGGAACCATCCTGAGTGCCAGCACCTCGGAATGGGCCATTAA
ACAGCAGTTGTACAAGACCAACGACACATCTGCGTTTGTAAATCTCGGCA
GAGTGCTCGCACAGCGCTGCCTGCAGTCTGGGATCACGGAAATGACCTGC
AACGTGGAGGCGGTACCGGGTAGCAAGCTGCAGAAGCTGCTTCAAACCAT
TCAGGATAATGGGGTGTCCTTCAAGGAACCCTCTCGCCTGCCCAACGAGC
AGCCCTGGGATGAGAAGAGGCATGAGAAGCCCTGGGAGGTGTCGGAAGAC
GCACTGGAAGCACCCAAATCAAAAGCAAGCTTTCTAGACCAT
BO14995.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:34:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL18-RA | 561 | CG12373-PA | 1..558 | 17..574 | 2790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:34:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL18-RA | 740 | CG12373-RA | 121..678 | 17..574 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:34:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12756554..12757111 | 17..574 | 2790 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:34:02 has no hits.
BO14995.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:46 Download gff for
BO14995.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL18-RA | 1..561 | 17..578 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:35:18 Download gff for
BO14995.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL18-RA | 156..716 | 17..578 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:57:03 Download gff for
BO14995.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL18-RA | 121..674 | 17..570 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:47 Download gff for
BO14995.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL18-RA | 156..716 | 17..578 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:21:26 Download gff for
BO14995.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL18-RA | 121..674 | 17..570 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:21:26 Download gff for
BO14995.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12756554..12757107 | 17..570 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:57:03 Download gff for
BO14995.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8644059..8644612 | 17..570 | 100 | | Plus |
BO14995.pep Sequence
Translation from 16 to 592
> BO14995.pep
MSRSARPLTSARVLHKIKELTTPQASTEYVINRNPRNLERLRIAYKPVGY
HLEKPGRSYWHTLEINTSGRYVSGDVKHFENGTILSASTSEWAIKQQLYK
TNDTSAFVNLGRVLAQRCLQSGITEMTCNVEAVPGSKLQKLLQTIQDNGV
SFKEPSRLPNEQPWDEKRHEKPWEVSEDALEAPKSKASFLDH
BO14995.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:21:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL18-PA | 186 | CG12373-PA | 1..186 | 1..186 | 974 | 100 | Plus |
