Clone BO15006 Report

Search the DGRC for BO15006

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:150
Well:6
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO15006.pep:
Sequenced Size:415

Clone Sequence Records

BO15006.3prime Sequence

413 bp (413 high quality bases) assembled on 2006-06-16

> BO15006.3prime
ATGGTCTAGAAAGCTTGCTCTTGGTATATATTTATTTTGAATATTTAAAT
CTTTACCGTCATATGTTATGTCCTCATAAAAAAACTTTCGATTCGAGCGA
CATTGGGGACCACACCTGGTAGAGCCACAACTTCGGCAATTATACCAGCA
ACCATCACATTCTTGATTCATACAGTCGCATATGTCCAGACCGTTTGAGC
GAATATTTCCGTATTCATCATATGCGCTATTTTGACATTTCTTTCTGCCT
TTTTTTTTATTTTCGGAATCTAAATAATTTGAGTATTCGTTAGAAACTCC
TTTTTTTCTATGTCTCTGACGCAAATTGCGACTGATGGAATAATCTGAAT
CTAAATACGGCTTCATATCTTGGCGAGAATTTGTTATACTAAAGTGCATG
TCGACTGATAACT

BO15006.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:04:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG14464-PA 384 CG14464-RA 1..381 399..19 1905 100 Minus
CG14464-PB 267 CG14464-RB 1..42 221..180 210 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:05:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG14464-RD 1289 CG14464-RD 28..409 400..19 1910 100 Minus
CG14464-RC 637 CG14464-RC 28..409 400..19 1910 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:05:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 4829273..4829494 400..179 1110 100 Minus
2R 25286936 2R 4829547..4829707 179..19 805 100 Minus
Blast to na_te.dros performed on 2015-02-10 21:05:51 has no hits.

BO15006.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:42:21 Download gff for BO15006.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14464-PA 1..384 15..399 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 06:25:20 Download gff for BO15006.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14464-RC 24..416 11..406 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:32:22 Download gff for BO15006.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14464-RC 24..416 11..406 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:32:22 Download gff for BO15006.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 4829269..4829493 180..406 98 -> Minus
2R 4829547..4829714 11..179 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 06:25:20 Download gff for BO15006.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 716774..716998 180..406 98 -> Minus
arm_2R 717052..717219 11..179 98   Minus

BO15006.5prime Sequence

413 bp (413 high quality bases) assembled on 2006-06-16

> BO15006.5prime
GAAGTTATCAGTCGACATGCACTTTAGTATAACAAATTCTCGCCAAGATA
TGAAGCCGTATTTAGATTCAGATTATTCCATCAGTCGCAATTTGCGTCAG
AGACATAGAAAAAAAGGAGTTTCTAACGAATACTCAAATTATTTAGATTC
CGAAAATAAAAAAAAAGGCAGAAAGAAATGTCAAAATAGCGCATATGATG
AATACGGAAATATTCGCTCAAACGGTCTGGACATATGCGACTGTATGAAT
CAAGAATGTGATGGTTGCTGGTATAATTGCCGAAGTTGTGGCTCTACCAG
GTGTGGTCCCCAATGTCGCTCGAATCGAAAGTTTTTTTATGAGGACATAA
CATATGACGGTAAAGATTTAAATATTCAAAATAAATATATACCAAGAGCA
AGCTTTCTAGACC

BO15006.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:30:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG14464-PA 384 CG14464-RA 1..381 17..397 1905 100 Plus
CG14464-PB 267 CG14464-RB 1..42 195..236 210 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:03:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG14464-RD 1289 CG14464-RD 28..409 16..397 1910 100 Plus
CG14464-RC 637 CG14464-RC 28..409 16..397 1910 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:03:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 4829273..4829494 16..237 1110 100 Plus
2R 25286936 2R 4829547..4829707 237..397 805 100 Plus
Blast to na_te.dros performed on 2015-02-11 16:03:22 has no hits.

BO15006.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:42:23 Download gff for BO15006.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14464-PA 1..384 17..401 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:58:12 Download gff for BO15006.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14464-RC 24..416 10..405 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:46:45 Download gff for BO15006.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14464-RC 24..416 10..405 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:46:45 Download gff for BO15006.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 4829269..4829493 10..236 98 -> Plus
2R 4829547..4829714 237..405 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:58:12 Download gff for BO15006.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 716774..716998 10..236 98 -> Plus
arm_2R 717052..717219 237..405 98   Plus

BO15006.complete Sequence

415 bp (415 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633324

> BO15006.complete
GAAGTTATCAGTCGACATGCACTTTAGTATAACAAATTCTCGCCAAGATA
TGAAGCCGTATTTAGATTCAGATTATTCCATCAGTCGCAATTTGCGTCAG
AGACATAGAAAAAAAGGAGTTTCTAACGAATACTCAAATTATTTAGATTC
CGAAAATAAAAAAAAAGGCAGAAAGAAATGTCAAAATAGCGCATATGATG
AATACGGAAATATTCGCTCAAACGGTCTGGACATATGCGACTGTATGAAT
CAAGAATGTGATGGTTGCTGGTATAATTGCCGAAGTTGTGGCTCTACCAG
GTGTGGTCCCCAATGTCGCTCGAATCGAAAGTTTTTTTATGAGGACATAA
CATATGACGGTAAAGATTTAAATATTCAAAATAAATATATACCAAGAGCA
AGCTTTCTAGACCAT

BO15006.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:50:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG14464-RD 351 CG14464-PD 1..348 50..397 1740 100 Plus
CG14464-RC 351 CG14464-PC 1..348 50..397 1740 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG14464-RD 1289 CG14464-RD 28..409 16..397 1910 100 Plus
CG14464-RC 637 CG14464-RC 28..409 16..397 1910 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 4829273..4829494 16..237 1110 100 Plus
2R 25286936 2R 4829547..4829707 237..397 805 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:50:00 has no hits.

BO15006.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:57:13 Download gff for BO15006.complete
Subject Subject Range Query Range Percent Splice Strand
CG14464-RC 1..351 50..401 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:29:49 Download gff for BO15006.complete
Subject Subject Range Query Range Percent Splice Strand
CG14464-RC 50..442 10..405 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:10:52 Download gff for BO15006.complete
Subject Subject Range Query Range Percent Splice Strand
CG14464-RC 29..409 17..399 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:57:13 Download gff for BO15006.complete
Subject Subject Range Query Range Percent Splice Strand
CG14464-RC 50..442 10..405 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:28:27 Download gff for BO15006.complete
Subject Subject Range Query Range Percent Splice Strand
CG14464-RC 29..409 17..399 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:28:27 Download gff for BO15006.complete
Subject Subject Range Query Range Percent Splice Strand
2R 4829274..4829493 17..236 100 -> Plus
2R 4829547..4829707 237..399 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:10:52 Download gff for BO15006.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 716779..716998 17..236 100 -> Plus
arm_2R 717052..717212 237..399 98   Plus

BO15006.pep Sequence

Translation from 16 to 415

> BO15006.pep
MHFSITNSRQDMKPYLDSDYSISRNLRQRHRKKGVSNEYSNYLDSENKKK
GRKKCQNSAYDEYGNIRSNGLDICDCMNQECDGCWYNCRSCGSTRCGPQC
RSNRKFFYEDITYDGKDLNIQNKYIPRASFLDH

BO15006.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:27:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG14464-PD 116 CG14464-PD 1..116 12..127 659 100 Plus
CG14464-PC 116 CG14464-PC 1..116 12..127 659 100 Plus