Clone BO15016 Report

Search the DGRC for BO15016

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:150
Well:16
Vector:pDNR-Dual
Associated Gene/TranscriptCG6750-RA
Protein status:BO15016.pep: validated full length
Sequenced Size:775

Clone Sequence Records

BO15016.5prime Sequence

771 bp (689 high quality bases) assembled on 2006-06-16

> BO15016.5prime
GAAGTTATCAGTCGACATGACGGAGCTGCTGATTGATCCGGACATCCGCG
TGTGGGTGTTCCTGCCCATCGTGCTGATCACGTTCCTGGTGGGCATTGTG
CGCCACTACGTCTCTATACTGATATCCACGCAGAAGAAGGCCGAGATCAC
CCAAATCCAGGACAGCCAGGCAATGATCCGGGCACGCTTGCTACGCGAGA
ACGGCAAGTATCTCAGCGCCCAGAGCTTCTCCATGCGTAAGAACTACTTC
AACAACGAGGAGACCGGCTACTTCAAGACTCAGAAACGGGCGCCTGTAGC
CCAAAACTCATCCGCCATGCTCACCGACATGGTCAAGGGAAACTTTATTA
ACGTGCTGCCCATGGTCGTGATCGGTGGCTGGATCAACTGGATGTTTTCG
GGCTTCGTCACCACCAAGGTACCCTTCCCGTTGACCCTGCGCTTTAAGCC
CATGCTCCAGCGGGGCGTGGAGCTGGCCTCGCTGGACGCCGCCTGGGTCT
CCTCAGCCTCTTGGTACTTCCTCAACGTGTTCGGCCTGCGCTCCATCTAC
ACACTGGTTCTTGGCGAGAACAATCATGCCGATCAGACGCAGGCACAGGC
GGATGCCATGACGGGCGCCGCCATGACTATGCCCCAGGATCCAAAGGCCG
CCTTCAAGGCCGAGTGGGAGGCGCTCGAGATAACCGAGTACCACAACGCA
CTCAAGAACATTGACGCTGACATGCTGGCTATCGCCAGTGCACCCGCGGC
ATCATCCGCAAGCTTTCTAGA

BO15016.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:31:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG6750-PA 744 CG6750-RA 1..741 17..757 3705 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:51:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG6750-RA 964 CG6750-RA 90..830 17..757 3705 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:50:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10731534..10732129 757..162 2980 100 Minus
2L 23513712 2L 10732186..10732334 165..17 745 100 Minus
Blast to na_te.dros performed on 2015-02-11 10:51:00 has no hits.

BO15016.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:40:35 Download gff for BO15016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6750-PA 1..744 17..761 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:41:19 Download gff for BO15016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6750-PA 1..744 17..761 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:11:37 Download gff for BO15016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6750-RA 90..835 17..765 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:39:54 Download gff for BO15016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6750-RA 90..835 17..765 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:39:54 Download gff for BO15016.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10731529..10732125 166..765 99 <- Minus
2L 10732186..10732334 17..165 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:11:37 Download gff for BO15016.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10732186..10732334 17..165 100   Minus
arm_2L 10731529..10732125 166..765 99 <- Minus

BO15016.complete Sequence

775 bp assembled on 2007-10-25

GenBank Submission: FJ633328

> BO15016.complete
GAAGTTATCAGTCGACATGACGGAGCTGCTGATTGATCCGGACATCCGCG
TGTGGGTGTTCCTGCCCATCGTGCTGATCACGTTCCTGGTGGGCATTGTG
CGCCACTACGTCTCTATACTGATATCCACGCAGAAGAAGGCCGAGATCAC
CCAAATCCAGGACAGCCAGGCAATGATCCGGGCACGCTTGCTACGCGAGA
ACGGCAAGTATCTCAGCGCCCAGAGCTTCTCCATGCGTAAGAACTACTTC
AACAACGAGGAGACCGGCTACTTCAAGACTCAGAAACGGGCGCCTGTAGC
CCAAAACTCATCCGCCATGCTCACCGACATGGTCAAGGGAAACTTTATTA
ACGTGCTGCCCATGGTCGTGATCGGTGGCTGGATCAACTGGATGTTTTCG
GGCTTCGTCACCACCAAGGTACCCTTCCCGTTGACCCTGCGCTTTAAGCC
CATGCTCCAGCGGGGCGTGGAGCTGGCCTCGCTGGACGCCGCCTGGGTCT
CCTCAGCCTCTTGGTACTTCCTCAACGTGTTCGGCCTGCGCTCCATCTAC
ACACTGGTTCTTGGCGAGAACAATCATGCCGATCAGACGCAGGCACAGGC
GGATGCCATGACGGGCGCCGCCATGACTATGCCCCAGGATCCAAAGGCCG
CCTTCAAGGCCGAGTGGGAGGCGCTCGAGATAACCGAGTACCACAACGCA
CTCAAGAACATTGACGCTGACATGCTGGCTATCGCCAGTGCACCCGCGGC
ATCATCCGCAAGCTTTCTAGACCAT

BO15016.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:11:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG6750-RA 744 CG6750-PA 1..741 17..757 3705 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:11:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG6750-RA 964 CG6750-RA 90..830 17..757 3705 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:11:51
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10731534..10732129 757..162 2980 100 Minus
2L 23513712 2L 10732186..10732334 165..17 745 100 Minus
Blast to na_te.dros performed on 2014-11-27 08:11:52 has no hits.

BO15016.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:02:40 Download gff for BO15016.complete
Subject Subject Range Query Range Percent Splice Strand
CG6750-RA 1..744 17..761 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:16:04 Download gff for BO15016.complete
Subject Subject Range Query Range Percent Splice Strand
CG6750-RA 73..818 17..765 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:08:40 Download gff for BO15016.complete
Subject Subject Range Query Range Percent Splice Strand
CG6750-RA 90..830 17..759 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:30:16 Download gff for BO15016.complete
Subject Subject Range Query Range Percent Splice Strand
CG6750-RA 73..813 17..759 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:12:58 Download gff for BO15016.complete
Subject Subject Range Query Range Percent Splice Strand
CG6750-RA 90..830 17..759 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:12:58 Download gff for BO15016.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10732186..10732334 17..165 100   Minus
2L 10731532..10732125 166..759 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:08:40 Download gff for BO15016.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10731532..10732125 166..759 99 <- Minus
arm_2L 10732186..10732334 17..165 100   Minus

BO15016.pep Sequence

Translation from 16 to 775

> BO15016.pep
MTELLIDPDIRVWVFLPIVLITFLVGIVRHYVSILISTQKKAEITQIQDS
QAMIRARLLRENGKYLSAQSFSMRKNYFNNEETGYFKTQKRAPVAQNSSA
MLTDMVKGNFINVLPMVVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRG
VELASLDAAWVSSASWYFLNVFGLRSIYTLVLGENNHADQTQAQADAMTG
AAMTMPQDPKAAFKAEWEALEITEYHNALKNIDADMLAIASAPAASSASF
LDH

BO15016.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:41:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG6750-PA 247 CG6750-PA 1..247 1..247 1259 100 Plus