Clone Sequence Records
BO15031.3prime Sequence
722 bp (715 high quality bases) assembled on 2006-06-16
> BO15031.3prime
ATGGTCTAGAAAGCTTGCATACTTTAGACCACGCGATCGCAGCGTGTTGG
GACGATTTGAGCCACCGCCAAAAATGCTCGTGCGGAAGTTCGGGGTCTGC
TGTGGATTGTTGTTACCCACGAGGCCAGGTTGCCCGGGAATCTGAATCGG
GCCCGGAGTGCTGGGCGCCCTGCTGATGCCTAGGCCGTTGTTTCGCAGCC
TGGGCGCCACATAGGGACGCTGGCTGGTGGAGATACCGCCCGTTCCCAGA
GGCGGCAGGATACCTCCGTTTGGAGGATTCACCACCGGAGGCTGTTGCGG
CTGCTGTGGAAGATTTGCATTGCCCTGAGGCTGCGGTTGCACTATAGGCG
GCACAATCGAGTTCACGGAGGAGTAATTGGGAGGCTGAGGCTGCTGCTGT
TGCACCGGAGGCTGCACCGTGATCGGCGGAATCTGCGTCTTCTTTGTGAG
CGCTGGAGCCAAGTACGGGTGGTTGCCACCACCAGTGCCACTGCTGTTGC
TCTGCGGAATGTCGTAGGTGCGGCCTGAAGGCGTGGTCACTTGGATACTG
TTGCCAGGCTGCATGCCACAGGGCTTTGGGTAGTCGTAGCCATTTGGCAC
CGCTTGGACATAGTTGTCGAAGTACTGGCTCACCTGATGCATGGGCGTGG
AGTAGTTGACGGCGATCAGCGACTCCTTTGGTCGTACTCCCGAGCGGGCT
TGGGCGTGGGCCGCCTGGAGGC
BO15031.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:31:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12003-PA | 1371 | CG12003-RA | 665..1368 | 722..19 | 3470 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:04:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12003-RA | 1807 | CG12003-RA | 826..1529 | 722..19 | 3490 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 13:04:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1566821..1567524 | 722..19 | 3490 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-08 13:04:07 has no hits.
BO15031.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:40:51 Download gff for
BO15031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-PA | 665..1371 | 16..722 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:41:42 Download gff for
BO15031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-PA | 665..1371 | 16..722 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:48:50 Download gff for
BO15031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-RA | 826..1538 | 11..722 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:52:15 Download gff for
BO15031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-RA | 826..1538 | 11..722 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:52:15 Download gff for
BO15031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1566821..1567533 | 11..722 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:48:50 Download gff for
BO15031.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1566821..1567533 | 11..722 | 99 | | Minus |
BO15031.complete Sequence
1402 bp assembled on 2010-06-24
GenBank Submission: KX796307
> BO15031.complete
GAAGTTATCAGTCGACATGAGAAGATCGAAAATTGCCCGCTTTCACACAA
TGGCCGCGTTGGGCCTACTGCTGCTGGTGGGCGTGCATGGAGCCACGATA
ATCAGCATCAAGTACCCGGATAAGCCCGCCGTGGAGCCGCAGCCGGCCAA
GAGGGATCTCAGCCTGAGCTACGCAGCCACCAACATCGACTCCAAGGAGG
GTACCCGCGTGAAGACCATCACGGTGATCAAGAATGTGGGAGGCATTTCG
GCGCCCGAAGAAGCTGCGGCCTTGGGATCCTCCATCGCCAGCAGCCACAA
CCACAAGCAGCAGCCGAAACTGATCATTGATCCCAGTCTGCACAAGAGCG
AGGAGTGGGCAAGTGCTTTCCGAGACAACTTTGACTCCTACGGAGCACTG
CCCGATGTGCCCGACATAGATGACCTATTCGAGTTTGTCAATCGCAAGAA
GCCCGAGGGTGAAAAGAAACCGGAGGAGGTGCCCAGCCAGAAGGAGGAAA
GGGTGCCGAAGGAGTTGCAAAAGCCGGCGGAGGAGACCACCACCAAGAAA
GCCGGAGCCAGTGAGCAAAGCGAGGGCGGGATCGTACCCAGTGGCAACAT
CGATAGCGACGAGGCTGTGGTCGAGAAGATAAAGGGTGATGCCGAACTGT
TGCCGCACATTAAGCAGGCCAACATCCTGCGCCTCCAGGCGGCCCACGCC
CAAGCCCGCTCGGGAGTACGAACCAAGGAGTCGCTGATCGCCGTCAACTA
CTCCACGCCCATGCATCAGGTGAGCCAGTACTTCGACAACTATGTCCAAG
CGGTGCCAAATGGCTACGACTACCCAAAGCCCTGTGGCATGCAGCCTGGC
AACAGTATCCAAGTGACCACGCCTTCAGGCCGCACCTACGACATTCCGCA
GAGCAACAGCAGTGGCACTGGTGGTGGCAACCACCCGTACTTGGCTCCAG
CGCTCACAAAGAAGACGCAGATTCCGCCGATCACGGTGCAGCCTCCGGTG
CAACAGCAGCAGCCTCAGCCTCCCAATTACTCCTCCGTGAACTCGATTGT
GCCGCCTATAGTGCAACCGCAGCCTCAGGGCAATGCAAATCTTCCACAGC
AGCCGCAACAGCCTCCGGTGGTGAATCCTCCAAACGGAGGTATCCTGCCG
CCTCTGGGAACGGGCGGTATCTCCACCAGCCAGCGTCCCTATGTGGCGCC
CAGGCTGCGAAACAACGGCCTAGGCATCAGCAGGGCGCCCAGCACTCCGG
GCCCGATTCAGATTCCCGGGCAACCTGGCCTCGTGGGTAACAACAATCCA
CAGCAGACCCCGAACTTCCGCACGAGCATTTTTGGCGGTGGCTCAAATCG
TCCCAACACGCTGCGATCGCGTGGTCTAAAGTATGCAAGCTTTCTAGACC
AT
BO15031.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:43:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12003-RA | 1371 | CG12003-PA | 1..1368 | 17..1384 | 6840 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:43:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12003-RA | 1807 | CG12003-RA | 162..1529 | 17..1384 | 6840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:43:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1566172..1567524 | 32..1384 | 6765 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 07:43:14 has no hits.
BO15031.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-24 14:15:29 Download gff for
BO15031.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-RA | 162..1529 | 17..1386 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:40 Download gff for
BO15031.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-RA | 162..1529 | 17..1386 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:02:25 Download gff for
BO15031.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-RA | 162..1529 | 17..1386 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:02:25 Download gff for
BO15031.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1566172..1567524 | 32..1386 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:40 Download gff for
BO15031.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1566172..1567524 | 32..1386 | 99 | | Plus |
BO15031.pep Sequence
Translation from 16 to 1402
> BO15031.pep
MRRSKIARFHTMAALGLLLLVGVHGATIISIKYPDKPAVEPQPAKRDLSL
SYAATNIDSKEGTRVKTITVIKNVGGISAPEEAAALGSSIASSHNHKQQP
KLIIDPSLHKSEEWASAFRDNFDSYGALPDVPDIDDLFEFVNRKKPEGEK
KPEEVPSQKEERVPKELQKPAEETTTKKAGASEQSEGGIVPSGNIDSDEA
VVEKIKGDAELLPHIKQANILRLQAAHAQARSGVRTKESLIAVNYSTPMH
QVSQYFDNYVQAVPNGYDYPKPCGMQPGNSIQVTTPSGRTYDIPQSNSSG
TGGGNHPYLAPALTKKTQIPPITVQPPVQQQQPQPPNYSSVNSIVPPIVQ
PQPQGNANLPQQPQQPPVVNPPNGGILPPLGTGGISTSQRPYVAPRLRNN
GLGISRAPSTPGPIQIPGQPGLVGNNNPQQTPNFRTSIFGGGSNRPNTLR
SRGLKYASFLDH
BO15031.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:42:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12003-PA | 456 | CG12003-PA | 1..456 | 1..456 | 2384 | 100 | Plus |
