Clone Sequence Records
BO15032.3prime Sequence
626 bp (626 high quality bases) assembled on 2006-06-16
> BO15032.3prime
ATGGTCTAGAAAGCTTGCAGAAGTCAGCTTGGAGCAGCTGATGATGTTCT
GGGGAAAGGCGGTGTAGTAGGTGGTCAGGGTGTTGACGGCATCGGAGACA
CAGGCGACGGCATTGGGACCGGTTTGCGGGATCTTCTTGGCCAGCTTGAT
GGCATTGTCCACTTGCTTCTTTAGGGACCACACCTTGCGCAGAGTCTTAA
CAAAGCAGCTGCCAGAGACCTTCGTCTCCTCGTCGTCCGTTTGGGGGCAA
GTGTTGGACCTCAGATTGATGAGGTCGTTGCAAGTGCTGAGGATCTTATT
GTTGGCGTTGATCAATTTGGTCACATCCTTGCTGGCGGTGACGCCGCACA
CGACCACGTCCGTGTTAAATTGGGTCGCACTGTCCTTGATGCCCGCCACC
CACTTGATTATGCAATTGAGTCCCTTGATGCTTCGCAGAGCGATCTTTAG
GGATTTGTAGGTCGTACTCAGCACGCCAAAGTCCTCCACCTCCAAGCTAC
CATCGGTCACATCGTCCAGTTCTGACGAAGAGTCCAGGGCGCTGGGAACA
GGAGCCACCAATGCATTTACGCAAAACAGGCCCAAAGCCAAAATAAGAAT
GGTATACTTCATGTCGACTGATAACT
BO15032.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:31:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8661-PA | 597 | CG8661-RA | 1..594 | 612..19 | 2970 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:47:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8661-RA | 677 | CG8661-RA | 27..621 | 613..19 | 2975 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:47:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17283818..17284369 | 19..570 | 2760 | 100 | Plus |
| X | 23542271 | X | 17284428..17284474 | 567..613 | 235 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 09:47:17 has no hits.
BO15032.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:40:52 Download gff for
BO15032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8661-PA | 1..597 | 18..612 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:41:43 Download gff for
BO15032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8661-PA | 1..597 | 18..612 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 04:52:40 Download gff for
BO15032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8661-RA | 27..621 | 19..613 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:06:58 Download gff for
BO15032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8661-RA | 27..621 | 19..613 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:06:58 Download gff for
BO15032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17283818..17284369 | 19..570 | 100 | <- | Plus |
| X | 17284432..17284474 | 571..613 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 04:52:40 Download gff for
BO15032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17177851..17178402 | 19..570 | 100 | <- | Plus |
| arm_X | 17178465..17178507 | 571..613 | 100 | | Plus |
BO15032.5prime Sequence
626 bp (626 high quality bases) assembled on 2006-06-16
> BO15032.5prime
GAAGTTATCAGTCGACATGAAGTATACCATTCTTATTTTGGCTTTGGGCC
TGTTTTGCGTAAATGCATTGGTGGCTCCTGTTCCCAGCGCCCTGGACTCT
TCGTCAGAACTGGACGATGTGACCGATGGTAGCTTGGAGGTGGAGGACTT
TGGCGTGCTGAGTACGACCTACAAATCCCTAAAGATCGCTCTGCGAAGCA
TCAAGGGACTCAATTGCATAATCAAGTGGGTGGCGGGCATCAAGGACAGT
GCGACCCAATTTAACACGGACGTGGTCGTGTGCGGCGTCACCGCCAGCAA
GGATGTGACCAAATTGATCAACGCCAACAATAAGATCCTCAGCACTTGCA
ACGACCTCATCAATCTGAGGTCCAACACTTGCCCCCAAACGGACGACGAG
GAGACGAAGGTCTCTGGCAGCTGCTTTGTTAAGACTCTGCGCAAGGTGTG
GTCCCTAAAGAAGCAAGTGGACAATGCCATCAAGCTGGCCAAGAAGATCC
CGCAAACCGGTCCCAATGCCGTCGCCTGTGTCTCCGATGCCGTCAACACC
CTGACCACCTACTACACCGCCTTTCCCCAGAACATCATCAGCTGCTCCAA
GCTGACTTCTGCAAGCTTTCTAGACC
BO15032.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:04:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8661-PA | 597 | CG8661-RA | 1..594 | 17..610 | 2970 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:54:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8661-RA | 677 | CG8661-RA | 27..621 | 16..610 | 2975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 17:54:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17283818..17284369 | 610..59 | 2760 | 100 | Minus |
| X | 23542271 | X | 17284428..17284474 | 62..16 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-30 17:54:49 has no hits.
BO15032.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:42:24 Download gff for
BO15032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8661-PA | 1..597 | 17..611 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:51:50 Download gff for
BO15032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8661-RA | 27..621 | 16..610 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:06:22 Download gff for
BO15032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8661-RA | 27..621 | 16..610 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:06:22 Download gff for
BO15032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17283818..17284369 | 59..610 | 100 | <- | Minus |
| X | 17284432..17284474 | 16..58 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:51:50 Download gff for
BO15032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17177851..17178402 | 59..610 | 100 | <- | Minus |
| arm_X | 17178465..17178507 | 16..58 | 100 | | Minus |
BO15032.complete Sequence
628 bp (628 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633330
> BO15032.complete
GAAGTTATCAGTCGACATGAAGTATACCATTCTTATTTTGGCTTTGGGCC
TGTTTTGCGTAAATGCATTGGTGGCTCCTGTTCCCAGCGCCCTGGACTCT
TCGTCAGAACTGGACGATGTGACCGATGGTAGCTTGGAGGTGGAGGACTT
TGGCGTGCTGAGTACGACCTACAAATCCCTAAAGATCGCTCTGCGAAGCA
TCAAGGGACTCAATTGCATAATCAAGTGGGTGGCGGGCATCAAGGACAGT
GCGACCCAATTTAACACGGACGTGGTCGTGTGCGGCGTCACCGCCAGCAA
GGATGTGACCAAATTGATCAACGCCAACAATAAGATCCTCAGCACTTGCA
ACGACCTCATCAATCTGAGGTCCAACACTTGCCCCCAAACGGACGACGAG
GAGACGAAGGTCTCTGGCAGCTGCTTTGTTAAGACTCTGCGCAAGGTGTG
GTCCCTAAAGAAGCAAGTGGACAATGCCATCAAGCTGGCCAAGAAGATCC
CGCAAACCGGTCCCAATGCCGTCGCCTGTGTCTCCGATGCCGTCAACACC
CTGACCACCTACTACACCGCCTTTCCCCAGAACATCATCAGCTGCTCCAA
GCTGACTTCTGCAAGCTTTCTAGACCAT
BO15032.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:15:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8661-RA | 597 | CG8661-PA | 1..594 | 17..610 | 2970 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:15:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8661-RA | 677 | CG8661-RA | 27..621 | 16..610 | 2975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:15:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17283818..17284369 | 610..59 | 2760 | 100 | Minus |
| X | 23542271 | X | 17284428..17284474 | 62..16 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:15:32 has no hits.
BO15032.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:07:39 Download gff for
BO15032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8661-RA | 1..597 | 17..611 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:23:53 Download gff for
BO15032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8661-RA | 10..604 | 16..610 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:39:01 Download gff for
BO15032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8661-RA | 28..621 | 17..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:07:39 Download gff for
BO15032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8661-RA | 10..604 | 16..610 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:03:29 Download gff for
BO15032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8661-RA | 28..621 | 17..612 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:03:29 Download gff for
BO15032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17283816..17284369 | 59..612 | 99 | <- | Minus |
| X | 17284432..17284473 | 17..58 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:39:01 Download gff for
BO15032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17178465..17178506 | 17..58 | 100 | | Minus |
| arm_X | 17177849..17178402 | 59..612 | 99 | <- | Minus |
BO15032.pep Sequence
Translation from 16 to 628
> BO15032.pep
MKYTILILALGLFCVNALVAPVPSALDSSSELDDVTDGSLEVEDFGVLST
TYKSLKIALRSIKGLNCIIKWVAGIKDSATQFNTDVVVCGVTASKDVTKL
INANNKILSTCNDLINLRSNTCPQTDDEETKVSGSCFVKTLRKVWSLKKQ
VDNAIKLAKKIPQTGPNAVACVSDAVNTLTTYYTAFPQNIISCSKLTSAS
FLDH
BO15032.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:01:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8661-PA | 198 | CG8661-PA | 1..198 | 1..198 | 1005 | 100 | Plus |
| CG5107-PA | 213 | CG5107-PA | 49..209 | 31..193 | 231 | 32.1 | Plus |
| CG8664-PB | 214 | CG8664-PB | 45..209 | 29..193 | 172 | 27.4 | Plus |
| CG8664-PA | 214 | CG8664-PA | 45..209 | 29..193 | 172 | 27.4 | Plus |
