Clone Sequence Records
BO15040.5prime Sequence
827 bp (713 high quality bases) assembled on 2006-06-16
> BO15040.5prime
GAAGTTATCAGTCGACATGGAGTCGAGGGTCACCAGCGGCACAGGTCCAC
CGAACACCATTATGATCCAGCTGGTGTCCCAACAGCCCAGTTCCTGTGGA
CAGATGCAGGCCATGCCCATTTCGGTGCAGACGATACCCTTGTTCCCCAA
TTCCAGAACATCGACAGAGCGACCTTGTCGATCGGTCTCCATTGCCCCGA
ATGTAAGACCTCCAACGGATGTCCCTCCTCCTCGAAGGAATTTAAGAATC
CGACCCGAGGAATATGCGACACCCAAGCGGAAGAATTCGCAAAGCCAGTT
TCGTCATTTCTCCCGCAGCATAAACCAACCTCCACCGGTGTACTATGTTC
TTCGACCAGAAGACCGTATTATGCCCATCTACATACCACCTCCGAGGTTT
AACAATGAGCAAGGATCAAGGATGGCGACGGAGTGTCCTTGCTGTGGCCA
TGCCAAGTCATTGAACCCGGAGGAACCTCTAAGAGTCCACGTAGCGCAGA
AAGAGTTTGTCAAATTAGAGAAGGCAACTCCTGGACATCGGGATCAATGT
ACTAACACCATTGACCAGCCAGATGTGGGAAATATAAGGACGATTTACGA
AACATTGGGACGCGCAATGGTCACTGCAGCCGTGGAGGCAGCCCAGAGAT
CCCAGCCAGCAGGACCCTCAGATCCGACAAATGTAATATTGAAACTATTA
ACCCAATTGGGGGAGCAGAATCAAACAACAGGCTTGAGTCCACATTCAGA
AGCAGTAGCAGAAAGTCCCGACCACCAACCACATATGCGCAGGCCCAAAG
CTAGCTTTACGGAAGCAGTCCGCATGA
BO15040.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:31:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13385-PA | 1062 | CG13385-RA | 1..811 | 17..827 | 4055 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 07:54:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13385-RA | 1238 | CG13385-RA | 92..902 | 17..827 | 4055 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 07:54:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8396740..8397550 | 17..827 | 4055 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 07:54:53 has no hits.
BO15040.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:00 Download gff for
BO15040.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-PA | 1..810 | 17..826 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:41:54 Download gff for
BO15040.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-PA | 1..810 | 17..826 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 03:45:34 Download gff for
BO15040.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-RA | 22..837 | 7..826 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 09:15:57 Download gff for
BO15040.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-RA | 86..901 | 7..826 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 09:15:57 Download gff for
BO15040.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8396734..8397549 | 7..826 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 03:45:34 Download gff for
BO15040.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8396734..8397549 | 7..826 | 99 | | Plus |
BO15040.complete Sequence
1093 bp (1093 high quality bases) assembled on 2006-06-21
GenBank Submission: FJ633331
> BO15040.complete
GAAGTTATCAGTCGACATGGAGTCGAGGGTCACCAGCGGCACAGGTCCAC
CGAACACCATTATGATCCAGCTGGTGTCCCAACAGCCCAGTTCCTGTGGA
CAGATGCAGGCCATGCCCATTTCGGTGCAGACGATACCCTTGTTCCCCAA
TTCCAGAACATCGACAGAGCGACCTTGTCGATCGGTCTCCATTGCCCCGA
ATGTAAGACCTCCAACGGATGTCCCTCCTCCTCGAAGGAATTTAAGAATC
CGACCCGAGGAATATGCGACACCCAAGCGGAAGAATTCGCAAAGCCAGTT
TCGTCATTTCTCCCGCAGCATAAACCAACCTCCACCGGTGTACTATGTTC
TTCGACCAGAAGACCGTATTATGCCCATCTACATACCACCTCCGAGGTTT
AACAATGAGCAAGGATCAAGGATGGCGACGGAGTGTCCTTGCTGTGGCCA
TGCCAAGTCATTGAACCCGGAGGAACCTCTAAGAGTCCACGTAGCGCAGA
AAGAGTTTGTCAAATTAGAGAAGGCAACTCCTGGACATCGGGATCAATGT
ACTAACACCATTGACCAGCCAGATGTGGGAAATATAAGGACGATTTACGA
AACATTGGGACGCGCAATGGTCACTGCAGCCGTGGAGGCAGCCCAGAGAT
CCCAGCCAGCAGGACCCTCAGATCCGACAAATGTAATATTGAAACTATTA
ACCCAATTGGGGGAGCAGAATCAAACAACAGGCTTGAGTCCACATTCAGA
AGCAGTAGCAGAAAGTCCCGACCACCAACCACATATGCGCAGGCCCAAAG
CTAGCTTTACGGAAGCAGTCCGCATGATGGAGAGGACCTCGTCTGATCCT
TCCATTGCTAAAGGGCCACCAGATGAGCTAGATGACCAACGTAGGCTTCC
ATCTGTACTCTCCGATGGTCGTCTTCGCGTCGAATATCCGAAAACGCCTA
GACCAACACCAACATACTCCGTCGAATCTGAAAACACCCTCAGTAATCAT
ATGTCCTCGGAGAGATTAAGACTCGATTCTGGTTCCTCGCCAAACCTGGG
AAACTCCATTGGACATAGCCAAGCGGCAAGCTTTCTAGACCAT
BO15040.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:53:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13385-RA | 1062 | CG13385-PA | 1..1059 | 17..1075 | 5295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:53:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13385-RA | 1238 | CG13385-RA | 92..1150 | 17..1075 | 5295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:53:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8396740..8397798 | 17..1075 | 5295 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:53:31 has no hits.
BO15040.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:33 Download gff for
BO15040.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-RA | 1..1062 | 17..1076 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:35:00 Download gff for
BO15040.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-RA | 22..1092 | 7..1079 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:40:48 Download gff for
BO15040.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-RA | 28..1086 | 17..1077 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:33 Download gff for
BO15040.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-RA | 22..1092 | 7..1079 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:10:24 Download gff for
BO15040.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-RA | 92..1150 | 17..1077 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:10:24 Download gff for
BO15040.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8396740..8397798 | 17..1077 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:40:48 Download gff for
BO15040.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8396740..8397798 | 17..1077 | 99 | | Plus |
BO15040.pep Sequence
Translation from 16 to 1093
> BO15040.pep
MESRVTSGTGPPNTIMIQLVSQQPSSCGQMQAMPISVQTIPLFPNSRTST
ERPCRSVSIAPNVRPPTDVPPPRRNLRIRPEEYATPKRKNSQSQFRHFSR
SINQPPPVYYVLRPEDRIMPIYIPPPRFNNEQGSRMATECPCCGHAKSLN
PEEPLRVHVAQKEFVKLEKATPGHRDQCTNTIDQPDVGNIRTIYETLGRA
MVTAAVEAAQRSQPAGPSDPTNVILKLLTQLGEQNQTTGLSPHSEAVAES
PDHQPHMRRPKASFTEAVRMMERTSSDPSIAKGPPDELDDQRRLPSVLSD
GRLRVEYPKTPRPTPTYSVESENTLSNHMSSERLRLDSGSSPNLGNSIGH
SQAASFLDH
BO15040.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:07:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13385-PA | 353 | CG13385-PA | 1..353 | 1..353 | 1857 | 100 | Plus |