Clone BO15068 Report

Search the DGRC for BO15068

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:150
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptCG9822-RA
Protein status:BO15068.pep: validated full length
Sequenced Size:823

Clone Sequence Records

BO15068.3prime Sequence

821 bp (821 high quality bases) assembled on 2006-06-16

> BO15068.3prime
ATGGTCTAGAAAGCTTGCGTAGAAATTGTGGTTTGGATTGTATTGTTCCT
TGATGGAACAGAGTGCGGGATACTCTGGATTACTTCCCGTCCGGCATTCA
GAGGCGGGCTTTCCGGCATTGTAAACAGGAACTCCGATGGCATAGACACT
GGCATAGTTGCAGGCAGTATTGTAGATGTAGAGGAAGGGGTACTGCGGAT
TGGTGAAGCGCATCATGGCACAGCCCACATGGGTGTTCCTGTCCAGCACG
GTTTCCACAAAGTGTCCATACTTTTCGAGGTCTTTGGTCAGCTTAAAATC
GGTAATGTAACTGCTGTCGATGAGTTTGTGCTCTCCAAACCACAAGCCCA
TCGACTGCTCCACCAGATTGGTCACGTTCAAGTCCCAGTTCCTCCGACGA
TCGACACCGCAGAGATTCTGACCCAGATTCCGGAAGCGGTAGCTGTTGTG
GCAGTCGTCGTGCTCCAGGTAACAGGTTTTCAGGTTCAACGTGGCCAGGT
ACTCCAGCTCCTCATCCCACACCATGGTGGCCATGCGGGTGGCCGGATAG
TAGCCGGGCAAAGATCCAGAGGCAATGTAGTTCCTGCGCTTGTTGTGCTC
ATTCACGATAAGTTTGCGATAAGGCTTCAGGTCCACCATAGTGGCATCCG
GGGAGCAGCTTTCATGGAATTTACCATCGTTATTACACGCTATGTGCACC
GTGTTGTCAGGACATAAGTCCGGATCACACCAGGACAGGGGCTGAGAACT
GGCCATACCCAGGATGATCAACAGACAACCGACCGTTTGAAATCTACCGT
ACTCCATGTCGACTGATAACT

BO15068.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:31:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG9822-PA 792 CG9822-RA 1..789 807..19 3945 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:59:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG9822-RA 883 CG9822-RA 36..826 809..19 3955 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:59:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21347260..21347654 278..672 1975 100 Plus
2R 25286936 2R 21346932..21347190 19..277 1295 100 Plus
2R 25286936 2R 21347712..21347848 673..809 685 100 Plus
Blast to na_te.dros performed on 2015-01-30 18:59:18 has no hits.

BO15068.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:23 Download gff for BO15068.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9822-PA 1..792 18..807 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:42:25 Download gff for BO15068.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9822-PA 1..792 18..807 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 19:04:21 Download gff for BO15068.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 25..831 12..821 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:16:47 Download gff for BO15068.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 25..831 12..821 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:16:47 Download gff for BO15068.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 21346927..21347190 12..277 98 <- Plus
2R 21347260..21347654 278..672 100 <- Plus
2R 21347712..21347859 673..821 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 19:04:21 Download gff for BO15068.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17234432..17234695 12..277 98 <- Plus
arm_2R 17234765..17235159 278..672 100 <- Plus
arm_2R 17235217..17235364 673..821 96   Plus

BO15068.5prime Sequence

781 bp (708 high quality bases) assembled on 2006-06-16

> BO15068.5prime
GAAGTTATCAGTCGACATGGAGTACGGTAGATTTCAAACGGTCGGTTGTC
TGTTGATCATCCTGGGTATGGCCAGTTCTCAGCCCCTGTCCTGGTGTGAT
CCGGACTTATGTCCTGACAACACGGTGCACATAGCGTGTAATAACGATGG
TAAATTCCATGAAAGCTGCTCCCCGGATGCCACTATGGTGGACCTGAAGC
CTTATCGCAAACTTATCGTGAATGAGCACAACAAGCGCAGGAACTACATT
GCCTCTGGATCTTTGCCCGGCTACTATCCGGCCACCCGCATGGCCACCAT
GGTGTGGGATGAGGAGCTGGAGTACCTGGCCACGTTGAACCTGAAAACCT
GTTACCTGGAGCACGACGACTGCCACAACAGCTACCGCTTCCGGAATCTG
GGTCAGAATCTCTGCGGTGTCGATCGTCGGAGGAACTGGGACTTGAACGT
GACCAATCTGGTGGAGCAGTCGATGGGCTTGTGGTTTGGAGAGCACAAAC
TCATCGACAGCAGTTACATTACCGATTTTAAGCTGACCAAAGACCTCGAA
AAGTATGGACACTTTGTGGAAACCGTGCTGGACAGGAACACCCATGTGGG
CTGTGCCATGATGCGCTTCACCAATCCGCAGTACCCCTTCCTCTACATCT
ACAATACTGCCTGCAACTATGCCAGTGTCTATGCCATCGGAGTTCCTGTT
TACAATGCCGGAAAGCCCGCCTCTGAATGCCGGACGGGAAGTAATCCAGA
GTATCCCGCACTCTGTTCCCATCAGGAACAA

BO15068.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:31:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG9822-PA 792 CG9822-RA 1..717 17..733 3585 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:51:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG9822-RA 883 CG9822-RA 36..802 15..781 3790 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:51:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21347260..21347654 546..152 1975 100 Minus
2R 25286936 2R 21346968..21347190 769..547 1115 100 Minus
2R 25286936 2R 21347712..21347848 151..15 685 100 Minus
Blast to na_te.dros performed on 2015-02-11 10:51:28 has no hits.

BO15068.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:41:24 Download gff for BO15068.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9822-PA 1..717 17..733 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:42:26 Download gff for BO15068.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9822-PA 1..717 17..733 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:11:41 Download gff for BO15068.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 25..800 3..779 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:41:48 Download gff for BO15068.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 25..800 3..779 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:41:48 Download gff for BO15068.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21346958..21347190 547..779 99 <- Minus
2R 21347260..21347654 152..546 100 <- Minus
2R 21347712..21347859 3..151 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:11:41 Download gff for BO15068.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17234463..17234695 547..779 99 <- Minus
arm_2R 17234765..17235159 152..546 100 <- Minus
arm_2R 17235217..17235364 3..151 96   Minus

BO15068.complete Sequence

823 bp (823 high quality bases) assembled on 2006-06-21

GenBank Submission: FJ633335

> BO15068.complete
GAAGTTATCAGTCGACATGGAGTACGGTAGATTTCAAACGGTCGGTTGTC
TGTTGATCATCCTGGGTATGGCCAGTTCTCAGCCCCTGTCCTGGTGTGAT
CCGGACTTATGTCCTGACAACACGGTGCACATAGCGTGTAATAACGATGG
TAAATTCCATGAAAGCTGCTCCCCGGATGCCACTATGGTGGACCTGAAGC
CTTATCGCAAACTTATCGTGAATGAGCACAACAAGCGCAGGAACTACATT
GCCTCTGGATCTTTGCCCGGCTACTATCCGGCCACCCGCATGGCCACCAT
GGTGTGGGATGAGGAGCTGGAGTACCTGGCCACGTTGAACCTGAAAACCT
GTTACCTGGAGCACGACGACTGCCACAACAGCTACCGCTTCCGGAATCTG
GGTCAGAATCTCTGCGGTGTCGATCGTCGGAGGAACTGGGACTTGAACGT
GACCAATCTGGTGGAGCAGTCGATGGGCTTGTGGTTTGGAGAGCACAAAC
TCATCGACAGCAGTTACATTACCGATTTTAAGCTGACCAAAGACCTCGAA
AAGTATGGACACTTTGTGGAAACCGTGCTGGACAGGAACACCCATGTGGG
CTGTGCCATGATGCGCTTCACCAATCCGCAGTACCCCTTCCTCTACATCT
ACAATACTGCCTGCAACTATGCCAGTGTCTATGCCATCGGAGTTCCTGTT
TACAATGCCGGAAAGCCCGCCTCTGAATGCCGGACGGGAAGTAATCCAGA
GTATCCCGCACTCTGTTCCATCAAGGAACAATACAATCCAAACCACAATT
TCTACGCAAGCTTTCTAGACCAT

BO15068.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:08:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG9822-RA 792 CG9822-PA 1..789 17..805 3945 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:08:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG9822-RA 883 CG9822-RA 36..826 15..805 3955 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:08:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21347260..21347654 546..152 1975 100 Minus
2R 25286936 2R 21346932..21347190 805..547 1295 100 Minus
2R 25286936 2R 21347712..21347848 151..15 685 100 Minus
Blast to na_te.dros performed on 2014-11-27 16:08:46 has no hits.

BO15068.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:16:36 Download gff for BO15068.complete
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 1..792 17..806 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:35:04 Download gff for BO15068.complete
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 2..799 14..812 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:50:50 Download gff for BO15068.complete
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 38..826 17..807 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:16:36 Download gff for BO15068.complete
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 2..797 14..806 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:11:48 Download gff for BO15068.complete
Subject Subject Range Query Range Percent Splice Strand
CG9822-RA 38..826 17..807 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:11:48 Download gff for BO15068.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21346928..21347190 547..807 99 <- Minus
2R 21347260..21347654 152..546 100 <- Minus
2R 21347712..21347846 17..151 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:50:50 Download gff for BO15068.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17234433..17234695 547..807 99 <- Minus
arm_2R 17234765..17235159 152..546 100 <- Minus
arm_2R 17235217..17235351 17..151 100   Minus

BO15068.pep Sequence

Translation from 16 to 823

> BO15068.pep
MEYGRFQTVGCLLIILGMASSQPLSWCDPDLCPDNTVHIACNNDGKFHES
CSPDATMVDLKPYRKLIVNEHNKRRNYIASGSLPGYYPATRMATMVWDEE
LEYLATLNLKTCYLEHDDCHNSYRFRNLGQNLCGVDRRRNWDLNVTNLVE
QSMGLWFGEHKLIDSSYITDFKLTKDLEKYGHFVETVLDRNTHVGCAMMR
FTNPQYPFLYIYNTACNYASVYAIGVPVYNAGKPASECRTGSNPEYPALC
SIKEQYNPNHNFYASFLDH

BO15068.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:06:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG9822-PA 263 CG9822-PA 1..263 1..263 1464 100 Plus
CG17974-PA 259 CG17974-PA 13..258 14..259 799 56.1 Plus
CG32679-PA 254 CG32679-PA 14..250 12..259 436 40.6 Plus
CG6628-PA 277 CG6628-PA 24..260 19..256 435 41.1 Plus
Ag5r-PC 256 CG9538-PC 4..256 6..263 419 36.9 Plus